G1745174


Basic Information

Item Value
gene id G1745174
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 47964959 ~ 47965199 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1998395
gtaattaaattgtttcAAGCAGCACATTTACAGTCAACAACACTCTGGTTAACACAAAAGCTGCcttaccagctctgctagggcgagtaaaatggtccaAGTGGTCTCATTTgcgtctggaagtagctagccaatgttagcttgggtgcttgactgccgttgtaaggccagaatgctcaaatcaaccctactccttggaCCGAACGTGTGCTCCGAGAGCAAAACGGTCTgaatttacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1998395 True 241 lncRNA 0.46 1 47964959 47965199

Neighbor

gene id symbol gene type direction distance location
LOC110500605 LOC106608606 coding upstream 6942 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 851897 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 1698037 46216617 ~ 46266922 (+)
LOC118936379 LOC106608786 coding upstream 1742768 46218549 ~ 46222191 (+)
LOC110500598 LOC106608783 coding upstream 1754402 46201831 ~ 46210557 (+)
LOC110500610 LOC106608613 coding downstream 417655 48382854 ~ 48414134 (+)
LOC110500624 LOC106608622 coding downstream 1628187 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 1640900 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 1646052 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 1689493 49654692 ~ 49662658 (+)
G1744793 NA non-coding upstream 3409 47960583 ~ 47961550 (+)
G1745093 NA non-coding upstream 138819 47825079 ~ 47826140 (+)
G1744969 NA non-coding upstream 332136 47631604 ~ 47632823 (+)
G1744968 NA non-coding upstream 333074 47630628 ~ 47631885 (+)
G1744645 NA non-coding upstream 728136 47163904 ~ 47236823 (+)
G1745175 NA non-coding downstream 122 47965321 ~ 47965630 (+)
G1746056 NA non-coding downstream 17207 47982406 ~ 47982633 (+)
G1746063 NA non-coding downstream 23415 47988614 ~ 47988923 (+)
G1746067 NA non-coding downstream 26153 47991352 ~ 47991723 (+)
G1746148 NA non-coding downstream 86616 48051815 ~ 48052076 (+)
G1743077 NA other upstream 2255009 45707142 ~ 45709950 (+)
G1743043 NA other upstream 2325217 45639296 ~ 45639742 (+)
si:dkey-38p12.3 LOC106608755 other upstream 2409370 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 other upstream 2471007 45485247 ~ 45517233 (+)
G1746210 NA other downstream 129568 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 359901 48325100 ~ 48363926 (+)
G1747255 NA other downstream 1012127 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 1480640 49445839 ~ 49446626 (+)

Expression


Co-expression Network