G1745175


Basic Information

Item Value
gene id G1745175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 47965321 ~ 47965630 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1998396
ATACGGAATACTATCAAacgcttctcaaagatgccctctggtggtcaaactagcaataacttccagtaacagaagaaatggctgagaattaaatgacatgccacagaatgctgcagcagcacgCAGGGTGTGCCGCAGTgtgacacaacttttaaaggaggaaccactgtacacaGCTATCTGTATTGATGTCTCTAACTGAAGTTAAGATGTCATCCTTGAAAGAATAGGTCATAAATCCCTCTCTATTTGTCttctacctatctacctattgAGGAATATCAATTGCTTtgaagtgtatatacagtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1998396 True 310 lncRNA 0.40 1 47965321 47965630

Neighbor

gene id symbol gene type direction distance location
LOC110500605 LOC106608606 coding upstream 7304 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 852259 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 1698399 46216617 ~ 46266922 (+)
LOC118936379 LOC106608786 coding upstream 1743130 46218549 ~ 46222191 (+)
LOC110500598 LOC106608783 coding upstream 1754764 46201831 ~ 46210557 (+)
LOC110500610 LOC106608613 coding downstream 417224 48382854 ~ 48414134 (+)
LOC110500624 LOC106608622 coding downstream 1627756 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 1640469 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 1645621 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 1689062 49654692 ~ 49662658 (+)
G1745174 NA non-coding upstream 122 47964959 ~ 47965199 (+)
G1744793 NA non-coding upstream 3771 47960583 ~ 47961550 (+)
G1745093 NA non-coding upstream 139181 47825079 ~ 47826140 (+)
G1744969 NA non-coding upstream 332498 47631604 ~ 47632823 (+)
G1744968 NA non-coding upstream 333436 47630628 ~ 47631885 (+)
G1746056 NA non-coding downstream 16776 47982406 ~ 47982633 (+)
G1746063 NA non-coding downstream 22984 47988614 ~ 47988923 (+)
G1746067 NA non-coding downstream 25722 47991352 ~ 47991723 (+)
G1746148 NA non-coding downstream 86185 48051815 ~ 48052076 (+)
G1746168 NA non-coding downstream 99267 48064897 ~ 48065202 (+)
G1744645 NA other upstream 797667 47163904 ~ 47236823 (+)
G1743077 NA other upstream 2255371 45707142 ~ 45709950 (+)
G1743043 NA other upstream 2325579 45639296 ~ 45639742 (+)
si:dkey-38p12.3 LOC106608755 other upstream 2409732 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 other upstream 2471369 45485247 ~ 45517233 (+)
G1746210 NA other downstream 129137 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 359470 48325100 ~ 48363926 (+)
G1747255 NA other downstream 1011696 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 1480209 49445839 ~ 49446626 (+)

Expression


Co-expression Network