G1746056


Basic Information

Item Value
gene id G1746056
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 47982406 ~ 47982633 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1999331
ggggaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacacttcaactatgacagacaaaatgagaaaaaaaatccagaaaatcacattgtaggatttttaatgaatgtatttgcaaattatggtggaaaataagtatttggtcaataacaaaagtttatctcaatactttgttatataccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1999331 True 228 lncRNA 0.32 1 47982406 47982633

Neighbor

gene id symbol gene type direction distance location
LOC110500605 LOC106608606 coding upstream 24389 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 869344 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 1715484 46216617 ~ 46266922 (+)
LOC118936379 LOC106608786 coding upstream 1760215 46218549 ~ 46222191 (+)
LOC110500598 LOC106608783 coding upstream 1771849 46201831 ~ 46210557 (+)
LOC110500610 LOC106608613 coding downstream 400221 48382854 ~ 48414134 (+)
LOC110500624 LOC106608622 coding downstream 1610753 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 1623466 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 1628618 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 1672059 49654692 ~ 49662658 (+)
G1745175 NA non-coding upstream 16776 47965321 ~ 47965630 (+)
G1745174 NA non-coding upstream 17207 47964959 ~ 47965199 (+)
G1744793 NA non-coding upstream 20856 47960583 ~ 47961550 (+)
G1745093 NA non-coding upstream 156266 47825079 ~ 47826140 (+)
G1744969 NA non-coding upstream 349583 47631604 ~ 47632823 (+)
G1746063 NA non-coding downstream 5981 47988614 ~ 47988923 (+)
G1746067 NA non-coding downstream 8719 47991352 ~ 47991723 (+)
G1746148 NA non-coding downstream 69182 48051815 ~ 48052076 (+)
G1746168 NA non-coding downstream 82264 48064897 ~ 48065202 (+)
G1746193 NA non-coding downstream 98925 48081558 ~ 48081783 (+)
G1744645 NA other upstream 814752 47163904 ~ 47236823 (+)
G1743077 NA other upstream 2272456 45707142 ~ 45709950 (+)
G1743043 NA other upstream 2342664 45639296 ~ 45639742 (+)
si:dkey-38p12.3 LOC106608755 other upstream 2426817 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 other upstream 2488454 45485247 ~ 45517233 (+)
G1746210 NA other downstream 112134 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 342467 48325100 ~ 48363926 (+)
G1747255 NA other downstream 994693 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 1463206 49445839 ~ 49446626 (+)

Expression


Co-expression Network