XLOC_003677 (CABZ01087025.1)



Basic Information


Item Value
gene id XLOC_003677
gene name CABZ01087025.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 41223485 ~ 41235090 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007142
CGAAGATCTGTCTTGTGTTTTGAAGATATCAATAGATGAAGACAGTTCTGGCCTCATGTGAGGGATCAAATGATCTGTTTTATCTGTCATGGGCTTGAGAACAGATTCGCTGAAACTAATTCAGACTGCATGCAAAATGGATCCTGCCACTTGCATCACGGGAGTCCCTCAGACGCGAGCGGTTCTTCTCCTCCACTGCAATCCATCTCTGCAATCCAGCAGGCCTCCTACTGCGCCTCCTCTAAAGCCTGTCAGAGGGGGAGTCTGCAGCTAGCGCTTCTGCTTCCAGGCATGTAAGTATGTACTCGCGTCTTCCAGAAACTTTGTTTGCTTAGAAGTTGCAACATCTACTTTTTTACAACTACACAGACCAAACTCCAAAACAAAGTGAAGATGGGATTTGATGCATGTTGCAACACAAATAGCTTTACTAATGTGGCTCTTATGAAAGCATTGCACGATTCTTGTGAAATAAGTGACATAAtcaaatggtaacact

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117232

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007142 True 499 lncRNA 0.44 3 41223485 41235090

Neighbor


gene id symbol gene type direction distance location
XLOC_003676 CABZ01087025.2 coding upstream 22213 41192329 ~ 41201272 (+)
XLOC_003675 camta1 coding upstream 65531 41110669 ~ 41157954 (+)
XLOC_003674 phf13 coding upstream 117853 41089574 ~ 41105632 (+)
XLOC_003673 svbp coding upstream 155696 41064822 ~ 41067789 (+)
XLOC_003671 NA coding upstream 267362 40891681 ~ 40956123 (+)
XLOC_003678 pax7a coding downstream 7554 41242644 ~ 41372948 (+)
XLOC_003679 park7 coding downstream 224318 41459408 ~ 41475995 (+)
XLOC_003680 BX571706.1 coding downstream 230017 41465107 ~ 41465236 (+)
XLOC_003681 kcnab2a coding downstream 305772 41540862 ~ 41699904 (+)
XLOC_003682 akr7a3 coding downstream 602946 41838036 ~ 41850086 (+)
XLOC_003369 CR854846.2 misc upstream 25100403 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 28511489 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 28529222 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 28537886 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 28543457 12679732 ~ 12680028 (+)
XLOC_003672 CABZ01044764.1 non-coding upstream 323596 40897326 ~ 40899889 (+)
XLOC_003670 CABZ01044767.1 non-coding upstream 334191 40889180 ~ 40889294 (+)
XLOC_003669 NA non-coding upstream 357943 40864955 ~ 40865542 (+)
XLOC_003684 NA non-coding downstream 698010 41933100 ~ 41934619 (+)
XLOC_003687 NA non-coding downstream 778913 42014003 ~ 42018127 (+)
XLOC_003688 NA non-coding downstream 800697 42035787 ~ 42036989 (+)
XLOC_003689 NA non-coding downstream 807469 42042559 ~ 42069664 (+)

Expression



Co-expression Network