G1747707


Basic Information

Item Value
gene id G1747707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49338468 ~ 49339087 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001067
TATAAACATGCttttatttgtctttttttttcttcaagtcAAATTTATTACATGTATAACATCTCTAAGGAAATGGAACATAATAAAAAATGAGTATACAAGATACGTCAAgacatggggtggcagggtagcctagtggttagagagttggactagtaaccgaaaggttgcacgttcaaatccccgagctgacaaggtacaaatctgtcgttctgcccctgaactgttcctaggccgtcattgaaaataagaatttgttcttaactgacttgcctagtaaaataaaggaaataaaataaaaataaaaataagtcaAAAATATTCCCAAACCCCCTTCCAAAAAATAATGAAGAAATGACAACCCCCCCAAATTGCAAGCTCTCAATAGTGCAATACACATTTCAAGACATTTATCATTAAGGAATAAAGACTAGTAAAAATAAGATTGTGTGTGAGTCAGTGAAAATAGTTCCTAAGGTGATTTTCTGTGGTCTATTGCAAAGATGTTCTGGTTGGGCTGCCGCGGATGTGGATGGTTGCTCTGGTTATCGTTCTGACAGAACTTTTTCTCCCCGTAAGTGCGCTTGGCCCTTCTTCTCTGGTCTGCTGACGCAATCGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001067 True 620 lncRNA 0.38 1 49338468 49339087

Neighbor

gene id symbol gene type direction distance location
LOC110500614 LOC106608616 coding downstream 363143 48915559 ~ 48975325 (-)
LOC110500613 LOC106608615 coding downstream 605658 48675649 ~ 48732810 (-)
LOC110500612 LOC106608614 coding downstream 685004 48420635 ~ 48653464 (-)
LOC110500609 LOC106608612 coding downstream 952258 48347195 ~ 48386210 (-)
LOC110500608 LOC106608690 coding downstream 1001425 48326396 ~ 48337043 (-)
LOC118936391 NA coding upstream 44317 49383404 ~ 49391628 (-)
LOC110500878 LOC102779023 coding upstream 53131 49392218 ~ 49424330 (-)
LOC110500618 LOC106608618 coding upstream 117339 49456426 ~ 49461330 (-)
LOC118942940 LOC106608618 coding upstream 131534 49470621 ~ 49484288 (-)
LOC110500619 LOC106608618 coding upstream 154542 49493629 ~ 49502064 (-)
G1747704 NA non-coding downstream 5003 49333242 ~ 49333465 (-)
G1747691 NA non-coding downstream 20061 49318204 ~ 49318407 (-)
G1747687 NA non-coding downstream 31693 49306461 ~ 49306775 (-)
G1747675 NA non-coding downstream 49880 49283951 ~ 49288588 (-)
G1747618 NA non-coding downstream 151202 49186902 ~ 49187266 (-)
G1747754 NA non-coding upstream 41930 49381017 ~ 49381351 (-)
LOC118942941 LOC106608618 non-coding upstream 167411 49506252 ~ 49511961 (-)
G1747906 LOC106608620 non-coding upstream 225062 49459688 ~ 49585178 (-)
G1747933 NA non-coding upstream 247858 49586945 ~ 49587226 (-)
G1747935 NA non-coding upstream 250974 49590061 ~ 49590331 (-)
G1746833 LOC106608613 other downstream 927715 48408491 ~ 48410753 (-)
G1743697 NA other downstream 3164734 46171967 ~ 46173734 (-)
LOC110500942 NA other downstream 3525575 45809435 ~ 45813290 (-)
G1743429 LOC105030512 other downstream 3566037 45770822 ~ 45772431 (-)
LOC110500574 LOC106608762 other downstream 3604304 45703162 ~ 45734292 (-)
G1747908 LOC106608618 other upstream 172982 49512069 ~ 49514164 (-)
G1747934 NA other upstream 248609 49587696 ~ 49588788 (-)

Expression


Co-expression Network