G1747934


Basic Information

Item Value
gene id G1747934
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49587696 ~ 49588788 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001347
cctctgctgtcttcaaccaagatctcagcgatcactgcctcattgcctgcatccgtaatgggtcagcggtcaaacgacctcctctcatcactgtaaaacgctccctgaaacacttcagcgagcaggcctttctaatcgacctggccggggtatcctggaaggatattgacctcatcccgtcagtagaggatgcctggatatttttttaaaatgccttcctaaccatcttaaataaacatgccccattcaagaaatttagaaccaggaacagatatagcccttggttctccccagacctgactgcccttaatcaacacaaaaacatcctatggcgttctgcattagcatcgaacagcccccgtgatatgcagctgttcagggaagctagaaaccattatacacaggcagttagaaaagccaaggctagctttttcaagcagaaatttgcttcttgcaacactaactcaaaaaagttctgggacactgtaaagtccatggagaataagaacacctcctcccagctgcccactgcactgaagataggaaacactgtcaccactgataaatccaccataattgaacatttcaataagcatttttctactgctggccatgctttccacctggctactcctacccctgtcaacagcactgcacccccaacagcaactcgcccaagccttccccatttctccttctcccaaatccattcagctgatgttctgaaagagctgcaaaatctggacccttacaaatcagccgggctagacaatctggaccctttctttctaaaattatctgccgaaattgttgccacccctattactagcctgttcaacctctctttcgtgtcgtctgagattcccaaagattggaaagcagctgcggtcatccccctcttcaaagggggggacactcttgacccaaactgctacagacctatatctatcctaccatgcctttctaaggtcttcgaaagccaagtcaacaaacagattaccgaccattttgaatctcaccataccttctctgctatgcaatctggtttcagagctggtcatgggtgcacctcagccacgctcaaggtcctaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001347 True 1093 TUCP 0.47 1 49587696 49588788

Neighbor

gene id symbol gene type direction distance location
LOC110500879 LOC106608620 coding downstream 2497 49583452 ~ 49585199 (-)
LOC110500622 LOC106608618 coding downstream 4369 49579676 ~ 49583327 (-)
LOC110500620 LOC106608618 coding downstream 15150 49563535 ~ 49572546 (-)
LOC118942941 LOC106608618 coding downstream 75735 49506252 ~ 49511961 (-)
LOC110500619 LOC106608618 coding downstream 85632 49493629 ~ 49502064 (-)
LOC110500626 LOC106608623 coding upstream 47231 49636019 ~ 49654484 (-)
trnaa-ugc-150 NA coding upstream 77676 49666464 ~ 49666539 (-)
LOC118942791 NA coding upstream 223027 49811815 ~ 49819364 (-)
LOC110500634 LOC106608634 coding upstream 506894 50095682 ~ 50169597 (-)
LOC118942942 NA coding upstream 657754 50246542 ~ 50248992 (-)
G1747933 NA non-coding downstream 470 49586945 ~ 49587226 (-)
G1747906 LOC106608620 non-coding downstream 4375 49459688 ~ 49585178 (-)
G1747754 NA non-coding downstream 206345 49381017 ~ 49381351 (-)
G1747707 NA non-coding downstream 248609 49338468 ~ 49339087 (-)
G1747935 NA non-coding upstream 1273 49590061 ~ 49590331 (-)
G1747938 NA non-coding upstream 16709 49605497 ~ 49605868 (-)
G1747940 NA non-coding upstream 17398 49606186 ~ 49608415 (-)
G1747937 aco1 non-coding upstream 29556 49618344 ~ 49623432 (-)
G1747947 NA non-coding upstream 44469 49633257 ~ 49633479 (-)
G1747908 LOC106608618 other downstream 73532 49512069 ~ 49514164 (-)
LOC110500878 LOC102779023 other downstream 163366 49392218 ~ 49424330 (-)
G1746833 LOC106608613 other downstream 1176943 48408491 ~ 48410753 (-)
LOC110500654 LOC106608650 other upstream 945217 50534005 ~ 50542563 (-)
G1749122 LOC106608652 other upstream 953647 50542435 ~ 50552525 (-)
LOC110500668 trmt44 other upstream 1447915 51036609 ~ 51051426 (-)
G1750625 NA other upstream 1648097 51236885 ~ 51237163 (-)
c21h11orf68 cssa07h11orf68 other upstream 1896912 51485700 ~ 51501323 (-)

Expression


Co-expression Network