G1748796


Basic Information

Item Value
gene id G1748796
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49934733 ~ 49936178 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2002361
tttggctGGCGGCTAGTCGAAGACAGCTAGGTGAACCAAACTAATGTGTTCGCATACTCCCAAAAAAGATGTtcacttgtaaaaaaaaaagaggggGAAAAAAGGGAAAGCGGCAATATTACCCCGGGACAGTAGAGGGCGATGAGCTGGTAATAATCATCTACGGCCAAGCAAGGAAGTGACGACACACCCAAACCACGAACACAAGTGTGGGAGAATAAAAGCGTACACAGAGAGACGTTTGACTTATGAGAAAATCGAAGTTGTGCGAATTGCCTGGGATCTACTAAATTTTATGTACCCAGCAACACATATAATAGGTGCGATACGGAGACAGAGAAGATGGTTCACAATGGTGGATGTAGGGACATACGGCCAAGAGAGCTATGGTGGAGTGTTTCAAGAGTTCTTTCGGGTCCAAACTGGTGCAAAAGACCCTCAATTTACCACTGCCAGCCAGGTACCACAGTGCCAAGTCCTATGTTTTCCTAGGAGATGCAGCTTTCCCCCTGCATGAGAATCTCATGCGCCCTTGTCCAGGTGTCCATCTTAATGAGCCTGTGCATACCTGGAACTACCGCCACGCTCGTTGTCGGAGAGTCCGAATTCATTCGGCATCATGGCTGCAAGGATGAGGATTCTTGGTCGTCCAATCAAGTGTACCCCTGAAAAAGGCTAAGGGCATGTTTGGCCCTCCACGGAGGAAGCTCATGAGCCAAACACAAGATACGTGCCTCACACTTTTGCTGAGACACCCCTCCCTTCTGGCAACTACCAACATGGAGGCTTGTGGCAGGGGGACCCTCTCGTGACAAGGCTTGCAAGTTAAACGACTTCCTCTGCCCCCAGTCGTGTGGCATGTCAGGAAGACGTTGTTAGGAGAGGACAACAACCCAAGGCCAGACAATCATGCAGAATAGGCCTTTGGactgctgacacacacacctcttgaTGGACACACAGACTCAGT

Function

NR:

description
PREDICTED: putative nuclease HARBI1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2002361 True 970 lncRNA 0.49 2 49934733 49936178

Neighbor

gene id symbol gene type direction distance location
LOC118942791 NA coding downstream 115369 49811815 ~ 49819364 (-)
trnaa-ugc-150 NA coding downstream 268194 49666464 ~ 49666539 (-)
LOC110500626 LOC106608623 coding downstream 280249 49636019 ~ 49654484 (-)
LOC110500879 LOC106608620 coding downstream 349534 49583452 ~ 49585199 (-)
LOC110500622 LOC106608618 coding downstream 351406 49579676 ~ 49583327 (-)
LOC110500634 LOC106608634 coding upstream 159504 50095682 ~ 50169597 (-)
LOC118942942 NA coding upstream 310364 50246542 ~ 50248992 (-)
LOC110500638 LOC106608637 coding upstream 314963 50251141 ~ 50257665 (-)
LOC110500880 LOC106608636 coding upstream 335875 50272053 ~ 50288270 (-)
LOC110500642 LOC106608642 coding upstream 402769 50338947 ~ 50341393 (-)
G1748248 NA non-coding downstream 45116 49889374 ~ 49889617 (-)
G1748244 NA non-coding downstream 48605 49885833 ~ 49886128 (-)
G1748234 NA non-coding downstream 55100 49879358 ~ 49879633 (-)
G1748231 NA non-coding downstream 55726 49878797 ~ 49879007 (-)
G1748229 NA non-coding downstream 56046 49878446 ~ 49878687 (-)
G1748820 LOC106608629 non-coding upstream 44322 49980500 ~ 49997768 (-)
G1748844 NA non-coding upstream 104126 50040304 ~ 50040920 (-)
G1748843 NA non-coding upstream 106041 50042219 ~ 50043837 (-)
G1748849 NA non-coding upstream 111351 50047529 ~ 50047919 (-)
G1748854 NA non-coding upstream 117345 50053523 ~ 50053770 (-)
G1747934 NA other downstream 345945 49587696 ~ 49588788 (-)
G1747906 LOC106608620 other downstream 349555 49459688 ~ 49585178 (-)
G1747908 LOC106608618 other downstream 420569 49512069 ~ 49514164 (-)
LOC110500619 LOC106608618 other downstream 432806 49493629 ~ 49502064 (-)
LOC110500878 LOC102779023 other downstream 510403 49392218 ~ 49424330 (-)
LOC110500654 LOC106608650 other upstream 597827 50534005 ~ 50542563 (-)
G1749122 LOC106608652 other upstream 606257 50542435 ~ 50552525 (-)
LOC110500668 trmt44 other upstream 1100525 51036609 ~ 51051426 (-)
G1750625 NA other upstream 1300707 51236885 ~ 51237163 (-)
c21h11orf68 cssa07h11orf68 other upstream 1549522 51485700 ~ 51501323 (-)

Expression


Co-expression Network