XLOC_003680 (BX571706.1)



Basic Information


Item Value
gene id XLOC_003680
gene name BX571706.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 41465107 ~ 41465236 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007149
tatggtgggcatatcccttattttcacatcccaatgttgacaggtatgtcaCCCAttgaaactaagcagggctgcatTTGGTCATTACctgcatgggagaccacatgggaaagcaagGTTGCTTccggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098473

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007149 True 130 rRNA 0.47 1 41465107 41465236

Neighbor


gene id symbol gene type direction distance location
XLOC_003678 pax7a coding upstream 92159 41242644 ~ 41372948 (+)
XLOC_003677 CABZ01087025.1 coding upstream 230017 41223485 ~ 41235090 (+)
XLOC_003676 CABZ01087025.2 coding upstream 263835 41192329 ~ 41201272 (+)
XLOC_003675 camta1 coding upstream 307153 41110669 ~ 41157954 (+)
XLOC_003674 phf13 coding upstream 359475 41089574 ~ 41105632 (+)
XLOC_003681 kcnab2a coding downstream 75626 41540862 ~ 41699904 (+)
XLOC_003682 akr7a3 coding downstream 372800 41838036 ~ 41850086 (+)
XLOC_003683 iffo2b coding downstream 393571 41858807 ~ 41929506 (+)
XLOC_003684 NA coding downstream 467864 41933100 ~ 41934619 (+)
XLOC_003685 aldh4a1 coding downstream 471199 41936435 ~ 41960276 (+)
XLOC_003369 CR854846.2 misc upstream 25342025 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 28753111 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 28770844 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 28779508 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 28785079 12679732 ~ 12680028 (+)
XLOC_003671 NA non-coding upstream 508984 40891681 ~ 40956123 (+)
XLOC_003672 CABZ01044764.1 non-coding upstream 565218 40897326 ~ 40899889 (+)
XLOC_003670 CABZ01044767.1 non-coding upstream 575813 40889180 ~ 40889294 (+)
XLOC_003687 NA non-coding downstream 548767 42014003 ~ 42018127 (+)
XLOC_003688 NA non-coding downstream 570551 42035787 ~ 42036989 (+)
XLOC_003689 NA non-coding downstream 577323 42042559 ~ 42069664 (+)
XLOC_003690 NA non-coding downstream 588015 42053251 ~ 42054601 (+)

Expression



Co-expression Network