Gene
RNA
| Item | Value |
|---|---|
| gene id | G1752111 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 52981286 ~ 52984157 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: alpha-protein kinase 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2006130 | True | 234 | lncRNA | 0.39 | 2 | 52981286 | 52984157 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942792 | NA | coding | downstream | 24430 | 52954794 ~ 52956856 (-) |
| LOC110500698 | rasgrp2 | coding | downstream | 27112 | 52888820 ~ 52954174 (-) |
| LOC118942945 | NA | coding | downstream | 58493 | 52919993 ~ 52922793 (-) |
| trnaa-ugc-151 | NA | coding | downstream | 96944 | 52884269 ~ 52884342 (-) |
| LOC118943018 | NA | coding | downstream | 1120161 | 51861002 ~ 51861125 (-) |
| LOC110500886 | LOC106608597 | coding | upstream | 12116 | 52989323 ~ 52997339 (-) |
| LOC110500704 | LOC106608596 | coding | upstream | 17498 | 53001655 ~ 53006323 (-) |
| LOC110500705 | NA | coding | upstream | 24536 | 53008693 ~ 53009427 (-) |
| LOC110500703 | LOC106608595 | coding | upstream | 25401 | 53009558 ~ 53024732 (-) |
| sf1 | LOC106608594 | coding | upstream | 44422 | 53028579 ~ 53041107 (-) |
| G1752104 | NA | non-coding | downstream | 5491 | 52975561 ~ 52975795 (-) |
| G1752091 | NA | non-coding | downstream | 6221 | 52974338 ~ 52975065 (-) |
| G1752068 | NA | non-coding | downstream | 8813 | 52963147 ~ 52972473 (-) |
| G1751988 | NA | non-coding | downstream | 13642 | 52918076 ~ 52967644 (-) |
| G1752029 | NA | non-coding | downstream | 64647 | 52915184 ~ 52916639 (-) |
| G1752122 | NA | non-coding | upstream | 43809 | 53027966 ~ 53028168 (-) |
| G1752123 | NA | non-coding | upstream | 58851 | 53043008 ~ 53043251 (-) |
| G1752089 | NA | non-coding | upstream | 175517 | 53159674 ~ 53160072 (-) |
| G1751128 | NA | other | downstream | 852968 | 52127998 ~ 52128318 (-) |
| c21h11orf68 | cssa07h11orf68 | other | downstream | 1480073 | 51485700 ~ 51501323 (-) |
| G1750625 | NA | other | downstream | 1744123 | 51236885 ~ 51237163 (-) |
| LOC110500668 | trmt44 | other | downstream | 1932198 | 51036609 ~ 51051426 (-) |
| G1749122 | LOC106608652 | other | downstream | 2428761 | 50542435 ~ 50552525 (-) |
| LOC110500888 | peli3 | other | upstream | 390512 | 53370137 ~ 53405755 (-) |
| G1752268 | NA | other | upstream | 434243 | 53418400 ~ 53419325 (-) |
| G1752321 | LOC103370121 | other | upstream | 518762 | 53502919 ~ 53505011 (-) |
| G1753637 | NA | other | upstream | 1047425 | 54031582 ~ 54032306 (-) |
| G1754055 | NA | other | upstream | 1858908 | 54843065 ~ 54849083 (-) |
