Gene
RNA
| Item | Value |
|---|---|
| gene id | G1753639 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 54032930 ~ 54033883 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: repetitive proline-rich cell wall protein 2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2007924 | True | 412 | lncRNA | 0.39 | 3 | 54032930 | 54033883 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500890 | LOC100380644 | coding | downstream | 47751 | 53891483 ~ 53985179 (-) |
| LOC110500726 | LOC106608579 | coding | downstream | 456977 | 53570165 ~ 53575953 (-) |
| sstr1b | sstr1a | coding | downstream | 481300 | 53535613 ~ 53551723 (-) |
| LOC110500888 | peli3 | coding | downstream | 627175 | 53370137 ~ 53405755 (-) |
| LOC110500716 | NA | coding | downstream | 868880 | 53160930 ~ 53164050 (-) |
| LOC110500730 | LOC106608572 | coding | upstream | 39236 | 54073119 ~ 54184661 (-) |
| LOC110500734 | NA | coding | upstream | 161189 | 54195072 ~ 54196766 (-) |
| LOC118936296 | NA | coding | upstream | 168921 | 54202804 ~ 54203516 (-) |
| LOC110500733 | NA | coding | upstream | 169943 | 54203826 ~ 54206446 (-) |
| sorcs2 | LOC106577493 | coding | upstream | 484195 | 54518078 ~ 54925493 (-) |
| G1753622 | NA | non-coding | downstream | 29695 | 54002891 ~ 54003235 (-) |
| G1753491 | NA | non-coding | downstream | 292618 | 53738955 ~ 53740312 (-) |
| G1753390 | NA | non-coding | downstream | 484532 | 53547932 ~ 53548398 (-) |
| G1753647 | NA | non-coding | upstream | 12687 | 54046570 ~ 54046949 (-) |
| G1753674 | NA | non-coding | upstream | 21753 | 54055636 ~ 54549495 (-) |
| G1753760 | NA | non-coding | upstream | 195200 | 54229083 ~ 54260212 (-) |
| G1753803 | NA | non-coding | upstream | 303439 | 54337322 ~ 54337923 (-) |
| G1753637 | NA | other | downstream | 624 | 54031582 ~ 54032306 (-) |
| G1752321 | LOC103370121 | other | downstream | 527919 | 53502919 ~ 53505011 (-) |
| G1752268 | NA | other | downstream | 613605 | 53418400 ~ 53419325 (-) |
| G1751128 | NA | other | downstream | 1904612 | 52127998 ~ 52128318 (-) |
| G1754055 | NA | other | upstream | 809182 | 54843065 ~ 54849083 (-) |
| LOC110500893 | tada2b | other | upstream | 931293 | 54961826 ~ 54966157 (-) |
| LOC110500749 | s100p | other | upstream | 1072803 | 55106685 ~ 55107622 (-) |
| G1754243 | NA | other | upstream | 1238335 | 55272218 ~ 55273949 (-) |
| G1755310 | NA | other | upstream | 2356174 | 56390057 ~ 56390566 (-) |
