Gene
RNA
| Item | Value |
|---|---|
| gene id | G1753838 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 54430952 ~ 54431689 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein transport protein sec31-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2008188 | False | 228 | lncRNA | 0.42 | 3 | 54430952 | 54431689 |
| TU2008189 | True | 258 | lncRNA | 0.42 | 3 | 54430952 | 54431689 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500733 | NA | coding | downstream | 224506 | 54203826 ~ 54206446 (-) |
| LOC118936296 | NA | coding | downstream | 227436 | 54202804 ~ 54203516 (-) |
| LOC110500734 | NA | coding | downstream | 234186 | 54195072 ~ 54196766 (-) |
| LOC110500730 | LOC106608572 | coding | downstream | 246300 | 54073119 ~ 54184661 (-) |
| LOC110500728 | LOC106608575 | coding | downstream | 391081 | 54008454 ~ 54039871 (-) |
| sorcs2 | LOC106577493 | coding | upstream | 86389 | 54518078 ~ 54925493 (-) |
| LOC110500893 | tada2b | coding | upstream | 530137 | 54961826 ~ 54966157 (-) |
| LOC110500742 | NA | coding | upstream | 536435 | 54968124 ~ 54976618 (-) |
| LOC110500745 | LOC106608548 | coding | upstream | 567291 | 54998980 ~ 55001213 (-) |
| ccl36.1 | LOC106608548 | coding | upstream | 572656 | 55004345 ~ 55007926 (-) |
| G1753787 | NA | non-coding | downstream | 82809 | 54342217 ~ 54348143 (-) |
| G1753803 | NA | non-coding | downstream | 93029 | 54337322 ~ 54337923 (-) |
| G1753760 | NA | non-coding | downstream | 170740 | 54229083 ~ 54260212 (-) |
| G1753647 | NA | non-coding | downstream | 384003 | 54046570 ~ 54046949 (-) |
| G1753839 | NA | non-coding | upstream | 632 | 54432321 ~ 54432723 (-) |
| G1753859 | NA | non-coding | upstream | 49097 | 54480786 ~ 54481566 (-) |
| G1753966 | NA | non-coding | upstream | 255812 | 54687501 ~ 54761906 (-) |
| G1753984 | NA | non-coding | upstream | 272264 | 54703953 ~ 54704529 (-) |
| G1754017 | NA | non-coding | upstream | 328693 | 54760382 ~ 54762263 (-) |
| G1753637 | NA | other | downstream | 398646 | 54031582 ~ 54032306 (-) |
| G1752321 | LOC103370121 | other | downstream | 925941 | 53502919 ~ 53505011 (-) |
| G1752268 | NA | other | downstream | 1011627 | 53418400 ~ 53419325 (-) |
| LOC110500888 | peli3 | other | downstream | 1025268 | 53370137 ~ 53405755 (-) |
| G1751128 | NA | other | downstream | 2302634 | 52127998 ~ 52128318 (-) |
| G1754055 | NA | other | upstream | 411376 | 54843065 ~ 54849083 (-) |
| LOC110500749 | s100p | other | upstream | 674997 | 55106685 ~ 55107622 (-) |
| G1754243 | NA | other | upstream | 840529 | 55272218 ~ 55273949 (-) |
| G1755310 | NA | other | upstream | 1958368 | 56390057 ~ 56390566 (-) |
