Gene
RNA
| Item | Value |
|---|---|
| gene id | G1752969 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 54748845 ~ 54750853 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2007100 | True | 293 | lncRNA | 0.46 | 2 | 54748845 | 54750853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500891 | afap1 | coding | upstream | 240568 | 54349344 ~ 54508277 (+) |
| LOC110500735 | ablim2 | coding | upstream | 406264 | 54206483 ~ 54342581 (+) |
| si:dkey-219e21.4 | LOC106608570 | coding | upstream | 545943 | 54199722 ~ 54202902 (+) |
| LOC110500729 | md2l1 | coding | upstream | 678302 | 54067452 ~ 54070543 (+) |
| LOC118942947 | NA | coding | upstream | 975520 | 53769687 ~ 53773325 (+) |
| LOC110500744 | grpel1 | coding | downstream | 204694 | 54955547 ~ 54960002 (+) |
| ccdc96 | ccdc96 | coding | downstream | 215381 | 54966234 ~ 54968068 (+) |
| LOC110500741 | LOC106595343 | coding | downstream | 231939 | 54982792 ~ 54986995 (+) |
| smim20 | NA | coding | downstream | 381115 | 55131968 ~ 55133176 (+) |
| LOC110500752 | NA | coding | downstream | 391371 | 55142224 ~ 55148988 (+) |
| G1752942 | NA | non-coding | upstream | 43944 | 54704069 ~ 54704901 (+) |
| G1752853 | NA | non-coding | upstream | 233092 | 54513627 ~ 54515753 (+) |
| G1752814 | NA | non-coding | upstream | 333802 | 54414176 ~ 54415043 (+) |
| G1752798 | NA | non-coding | upstream | 387866 | 54360526 ~ 54360979 (+) |
| G1752727 | NA | non-coding | upstream | 400670 | 54344087 ~ 54348175 (+) |
| G1752932 | NA | non-coding | downstream | 9596 | 54760449 ~ 54762436 (+) |
| G1752975 | NA | non-coding | downstream | 13056 | 54763909 ~ 54765493 (+) |
| G1752982 | NA | non-coding | downstream | 30366 | 54781219 ~ 54781499 (+) |
| G1752989 | NA | non-coding | downstream | 87436 | 54838289 ~ 54866200 (+) |
| G1753023 | NA | non-coding | downstream | 111986 | 54862839 ~ 54911974 (+) |
| LOC110500722 | NA | other | upstream | 1492244 | 53251413 ~ 53256660 (+) |
| G1751699 | LOC106608599 | other | upstream | 1776462 | 52962449 ~ 52972383 (+) |
| G1750050 | NA | other | upstream | 2551838 | 52191200 ~ 52197007 (+) |
| G1750030 | LOC106608688 | other | upstream | 2653740 | 52094709 ~ 52095105 (+) |
| G1753100 | NA | other | downstream | 250726 | 55001579 ~ 55011678 (+) |
| LOC110500754 | LOC106591080 | other | downstream | 839752 | 55590450 ~ 55592100 (+) |
| G1755158 | NA | other | downstream | 1635554 | 56386407 ~ 56387622 (+) |
| G1755570 | NA | other | downstream | 2042878 | 56793731 ~ 56794574 (+) |
| G1756789 | NA | other | downstream | 3175627 | 57926480 ~ 57928244 (+) |
