XLOC_036813


Basic Information

Item Value
gene id XLOC_036813
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 53464218 ~ 53467703 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072567
taatattatttactgtcatcatgacaaagataaaaataagtcagttactagagatgagttattaaactgttCCGAAAAGTGTTGAGGAAATctgctctacgttaaacagaaatcgaggaaaaaaataaacaggagggctaataattctgactgtatataaagtccaaaaacatcctcaaaatgTGTCTTCAATGCTTCCGTATAATTTTATTAAACGTTTAAGAATACTTCTGTGtgtttatggaggatgagagagctccaggatttcatctaaaatatcttaatcgTGTCTGAAAATGATAGTAATTAATGGCAGAGTTTTCActttggctgaactatccttttaattctCAATACTTGCATTTAATACTTGTACTTATAAATGTTTAGGGATTCTTTAAATGCCTTATAGTTTCACTGAAATCCAGTTCACACATGTGAAAgcaagggtaacactttacaaaaaggtgaACATTCGTTAACGTAATGATAATAAATCATGTTCCCGAAGCCATTATTAGTTCCAGTGCACTCGCCAGTGACGTCTTCATATCATTTAATAAACCTGAGCTGAAATAAACAACGAAGAGTTGCAAAAGATTAAGTTTTAAATgagttattttaattaatgaatatacTGCTTGTGGTTTAGTTACTGCGTTAATTCTTTTATACTGTATACTTCAATACTGCTTTAATTATCTtcattctaaagtgttacccaagaTCAAGTCTTATCTCATTTCAACTGccacaaaataaggaaaacttTCATCATGCATACATTTCGGTAAGCCTTAACACAATTTGTTGGCAGATTTGCCCTCTTTGATGCCAAGTGCAACCATAATCAGTAGGAAAACGGAGACATTCAGTCcataatgacatttatttattatttaactggaAAAACCAGAGACCTCATATATGAAAATGCACATGTGATCATATTTGCTACTTGAATAAGGGATTTGTCTACTGTCAAAAGCAAAGAACAAAATAGgacacggcggaatgaaccgcaaactactccagcgtatgttttatgcagcggatgcacttccggctgcaacccagtactgggaaacacccatgcacactcattctcacacacactcatgcactacggccaatgtagttgatcagttcccctatagcgcatgtgtttggactgtgggggaaaccggagcacccggaggaaacccacggtaacacagggagaacatgcaaactccacacagaaacaccaactgttccagctgggactcgaaccagtgtgagaccacagtgctattcactgagccaccatgactcCATTTTACTATTGAGAAATATGAATGTTACATGCATTAACTATATGGTTAGAGTTAGGTTTTGGGTTATTTGCTTGTAATTTtgcttaattatttttaattattatagaaAATAAGTGTAACAAGGcatccttaaaataaagtgtttccagAGATATTTGTGAACAAATGAACTGTGACATATATTTAAgagcatttaaatgtttatgacagTACATCATTCATAGGACACCTTCAGAATGTGTTGTATTGTACATGATGCACATCTTTATGAGTGAGGCCCCTGGTTATTCCAAAAGTGGTTAACACTGTGAAGCTTTTACCATGGTAATTGCTTCACAGATGTGAATAAAACTCTGTACTCCAACTCAGGCTCACTGGAAACACTTGCTTTAGTCTACATTTTAGTGTGAAACCACATAAACATACTTTAACTTACGTTTAGTTGCAGTTTGTGtataaaatgaacactagggggcagtgtgatGACAACTTTTGCTCCTTTTCACATTAATGATACTAACAGGGACATAATAACGGTAAATACAGGATGATCTTCAAGCCGTTCTTTgcacaaaaccaaaataaacagcacaaaacaacttaatgctgtctatgatttgtaattaaTATGTTTGTCACCTTTATACCTCTATATAAACACTCTTCtggtggtcagtttgctcagtggTGAGTGCTGAAGAGCGCTCGAGTCCTGGTGAAGCACGCTtccacaaaacaaataaaagcaatgcaaaatcaaggtaaaagCACTTGGTCAAGGTGCACTTTTCTCTTTTGgctgcttctgaaaacactattggttgggtttagggaaatgttTAGCTTAGTGGTACCCTAGCTGATCTGTACAACAAGAGCTGCCACCTTGTGGACGTggatctgaaacatacaacaaaatgtaccctaattaatatatttcatattagCAGAAATGTATTTAGTGCCCTCTAGTgcatttgtcatctaaaatgcacaacaaaacatacctggagcaatatattttcattttcacaGTGCCCTCTAAttgatttgtcatctgaaacgtacaactaAACAAACTCTACGTAACGTATTTTATTGCCACTTAAAAATTTAGACAGCACTCTCTAGTGGACTTGTCctttgaaacgtacaacaaaacaaacccaGAGTAACACATTTCAGGTTCACTTAAAATTTAAGACAGCGCCCCTCTAGTGGATTAAACATCGGAAACATACAACCAAACGAACCCTGAGTAACGCATTTCAGGTTCACTTAAAATTCAGACAGCGTCGTCGTgtgtatttgtcatctgaaacgtacaacaaaacaaaccTTGAGTATCGCATTTCAGATTCActtaaaaatgtagacagcgccctctagtggatttgttcaTCTGAAATATACATCCAAACGAACCCTGAGTAACGCATTTCAGGTTCActtaaaaatgtagacagcgccctctagtggatttatcaccTGAAACGTACAATAAAACACACTCTGAGCAATGAATTTCAGATTTGCTACAATGTAGCTCCAAACACATACttccaatgagcctggattgCTTTAAACGGTTAGCGAAGGTGCATCTGTTTGACCAAGTGAGCTTTTTCTGGTTAAGTTGGTTTGGAATCACCAAAAGTTGAACAGATTTTCCAGTTTATCAGTTTTGGAAATTTCCCCAAGACATCAGTAGGTTTAACTACATGAAAAGCTCAAAAGGAGTGTAAAGCGATTGGTCAGCGTGAGCAGCAGAGCTTGACACTGCAGTTTTTAAAGGCACGGTTACCTCGTTTTTACAACACTACAACACTGAGACGTAGATCATTTCGTCGGCCAGATCCTCGTCCCGTCGGCTGCTACTGTCCGTCTCCTCATCGCTGTAATCTCGTAGATTTGGACTCAAACCTGTCTCGTTTCCCCCAGAGCCCAGCGTCACATTCAGTAGGTTGCTAGCGGCACTTTCCATCTCGTCGATTGTCATTTCGCAAGCGTCTGCAATCTCGTGTTTGGTTACAGTCACAAACTTTGGATCCTTCGCGTATtttcccagtccaccagatatcATC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072567 True 3400 lncRNA 0.38 2 53464218 53467703

Neighbor

gene id symbol gene type direction distance location
XLOC_036812 CU914536.1 coding downstream 107322 53356779 ~ 53356896 (-)
XLOC_036811 gabrd coding downstream 266064 53185079 ~ 53198154 (-)
XLOC_036810 sult1st4 coding downstream 284535 53171002 ~ 53179683 (-)
XLOC_036809 rbsn coding downstream 294773 53150972 ~ 53169445 (-)
XLOC_036808 b3galt4 coding downstream 356011 53107380 ~ 53108207 (-)
XLOC_036814 chdh coding upstream 7052 53474755 ~ 53490376 (-)
XLOC_036815 actr8 coding upstream 50295 53517998 ~ 53535303 (-)
XLOC_036816 selenok coding upstream 69400 53537103 ~ 53542424 (-)
XLOC_036817 parapinopsina coding upstream 76391 53544094 ~ 53548145 (-)
XLOC_036818 lrtm1 coding upstream 171922 53639625 ~ 53649294 (-)
XLOC_036807 NA non-coding downstream 528748 52933059 ~ 52935470 (-)
XLOC_036805 NA non-coding downstream 581442 52877822 ~ 52882776 (-)
XLOC_036801 NA non-coding downstream 832734 52627507 ~ 52631484 (-)
XLOC_036797 NA non-coding downstream 1059072 52401657 ~ 52405146 (-)
XLOC_036822 NA non-coding upstream 313778 53781481 ~ 53781852 (-)
XLOC_036824 CABZ01090219.1 non-coding upstream 373599 53841302 ~ 53851585 (-)
XLOC_036829 NA non-coding upstream 593994 54061697 ~ 54068296 (-)
XLOC_036830 NA non-coding upstream 602458 54070161 ~ 54075099 (-)
XLOC_036832 NA non-coding upstream 644326 54112029 ~ 54113768 (-)

Expression


Co-expression Network