XLOC_036821 (apeh)


Basic Information

Item Value
gene id XLOC_036821
gene name apeh
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 53747925 ~ 53773539 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071879
ATGTTCAGCGGTCGGGTTCCTGTCCAGAGACTCTTCTGTTCCGCAGTCATGGGCTCAAAGGTGCTCCGGGATCCGGTGGAGATCGCTCAGCTGTACCGGGATCAGTGCCGTTTTCCCAGCTTGTGTCGTGCTGATGTGGGACCAGTGATCACCTCAGGATACGGCGGACAGTATAGCAACATCTACACAGAGTGGACTCAGCGGGATCTGGAGAGGATGGAGAATGTGAAGTTTTGTCGGCAGTACATTGTGTTTCACCATGACAAATCGGTGGTTTATTCCGGACCCTCAGGAAACTGCACTGAGATCAGGGGAGAGCTGCTCAGCGTGGATTCTCCATCTGGTGAAATGAAGGCTGTGCTGAGGGAAAACACCACTGAAGGAGAAGAAAAGCAGTTCCTGGAGATCTGGCACAAGAACAGAAAGCTGAAGTGCCTTAATCTGACCACCCTCAACAAACACGGCAAAGTCTATGAAGACGATCAGTTTGGCTGTTTGGTCTGGTCTCATTCGGAGACGCACCTCCTCTACATCGCGGAGAAGAAACGGCCGAAGACTGAATCCTACTTTCAGCAGGGGCCGGAGACCAGCCTGACCCCCGATGAAGAGGAGCCCATCAAGACTGACAAGAAGGAGGAAACCgtcccgggtCATCAGTTTGAGTATTATGAGGACTGGGGTGAGAATTTGGTCAGTAAGAGCAGTCCAGTGCTGTGTGTTCTGGACATCGAGGGCAGCAACATCTCTGTGCTGGAAGGAATCCCGGCTGCCATCTCTCcaggacagGCGTTCTGGGCTCCCGCTGACACCGGTCTGCTGTTTGTGGGCTGGTGGCACGAGCCCTTCAGACTGGGACTCAAATCCTGCGGCAACAGAAGGTCGTCTCTGTTTTATGTGGATCTGGCCAGTGGGAAATGCGatCAGCTCTCCAGTGACTCCATCTCTGTCTGTTCTCCTCGTCTGAGCCCTGATCACTGCAGGATTGTGTATCTGGAGTCCGGCGTCTCCTGTTCACATCTGCAGTGCCACCGACTCTGCGTgTTCGACTGGTACACCAAACAGACCAGCGTTGTGGTTGATGTGGTGCAGAGAGCCAGAGAtgaTGGTTTCACTGGGATCTACAGCTTTCTGTTGTCTCCTCGCTGCTGGTCTGCTGATAGTGAGCGTGTGTTGTTCTGCAGCGCTCAGCGGAGCCGGAAGgAATTGTTTGTTGTGGACACCTCAAGCCGTGAAATCACGCGTCTCACCTCTCAATCTCAGGAGGGAAGCTGGAATCTGTTGAACATTCACAGAGATCTGATGGTCGTCAGCTGCTCTTCCCCAAACTCTCCTCCAGACCTGCGGGTGGGTTTTCTGCCAgggaaaggctctgaaagcaagATTTCCTGGGTCACATTAGAAGAATCTCAACCTCAGAGCGACATCAGCTGGCAGACGCTCAACTTCAGCCCACCGCCCGAGCAGGACAACACACAATACCCGGGTTTGGACTTTGATGCTCTTCTGCTGAAGCCAAAGGACACACCAGCGGACGGCAAACTACCTCTCATCGTCATGCCACACGgcgGGCCTCACTCAGTGCTGGTGTCGGAGTGGATCTTGTCGACTGCTGTTCTGTGTAAGATGGGCTTCAGTGTTCTGCTGGTGAATTACAGAGGCTCGCTTGGCTTCGGTCAGGATAACGTCTTCTCCTTACCAGGAAACTGCGGCACTCAGGATGTAAAAGACGTGCAGTTTGCGGTGGACAGTGTTTTGAAGCAAGGCGGCTTTGATGAGCAGAAAGTGGCTGTGATTGGAGGATCTCACGGTGGATTTCTGGCTTGTCATCTGATTGGACAATATCCCGGGTTTTACAAGGCGTGTGTGGCGCGAAATCCAGTACCAATCTGGCATCCATGGTCTGCTGCACGGACATCCCAGACTGGTGTATAGTGGAAGCTGGATTTGACTATAAACCAGACATTCAACTTGAACCCGCAATTCTGGAGCAGATGCTGATCAAGTCACCCATAAAACACGTTGCCAAGGTGAAGACTCCAGTGCTTCTGATGCTGGGTGAAGGTGACAAGCGAGTCCCTAATAAACAGGGCATTGAATATTACAAAGCTCTGAAGAGCCTGCAGGTCCCCGTAAGagtGTTGTGGTACCCAGGCAATAATCACTCTCTGTCCAAAGTGGACGCAGAATCAGACGGGTTCATGAACGGCGCTCTCTGGATGATCCAGCATCTTTCTCTGTGA

Function

symbol description
apeh Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in pronephric duct and pronephric mesoderm. Orthologous to human APEH (acylaminoacyl-peptide hydrolase).

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function

KEGG:

id description
ko01002 Peptidases and inhibitors

ZFIN:

id description
ZDB-GENE-030131-9870 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in pronephric duct and pronephric mesoderm. Orthologous to human APEH (acylaminoacyl-peptide hydrolase).

Ensembl:

ensembl_id ENSDARG00000008703

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071879 True 2240 mRNA 0.53 23 53747925 53773539

Neighbor

gene id symbol gene type direction distance location
XLOC_036820 tlr9 coding downstream 12526 53730368 ~ 53735399 (-)
XLOC_036819 wnt5a coding downstream 67272 53670395 ~ 53680653 (-)
XLOC_036818 lrtm1 coding downstream 98631 53639625 ~ 53649294 (-)
XLOC_036817 parapinopsina coding downstream 199780 53544094 ~ 53548145 (-)
XLOC_036816 selenok coding downstream 205501 53537103 ~ 53542424 (-)
XLOC_036822 NA coding upstream 7942 53781481 ~ 53781852 (-)
XLOC_036823 BSN coding upstream 20483 53794022 ~ 53803429 (-)
XLOC_036824 CABZ01090219.1 coding upstream 67763 53841302 ~ 53851585 (-)
XLOC_036825 mib2 coding upstream 89206 53862745 ~ 53896982 (-)
XLOC_036826 ubiad1 coding upstream 144695 53918234 ~ 53926228 (-)
XLOC_036813 NA non-coding downstream 280222 53464218 ~ 53467703 (-)
XLOC_036812 CU914536.1 non-coding downstream 391029 53356779 ~ 53356896 (-)
XLOC_036807 NA non-coding downstream 812455 52933059 ~ 52935470 (-)
XLOC_036805 NA non-coding downstream 865149 52877822 ~ 52882776 (-)
XLOC_036801 NA non-coding downstream 1116441 52627507 ~ 52631484 (-)
XLOC_036829 NA non-coding upstream 288158 54061697 ~ 54068296 (-)
XLOC_036830 NA non-coding upstream 296622 54070161 ~ 54075099 (-)
XLOC_036832 NA non-coding upstream 338490 54112029 ~ 54113768 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000050_01023375_01033682 APEH coding CI01000050 null 1023375 ~ 1034169 (+)