XLOC_036829


Basic Information

Item Value
gene id XLOC_036829
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 54061697 ~ 54068296 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072569
gtgtgtgtgtgtgtgtatgtgtgtgtgtatatgtgtgtgtgtatatgtgtgtgtgtgtgtgtgtgtgtatatgtgtgtgtgtatatgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatttgtgtgtgtgtgtgtgtgtatatgtgtgtgtgtgtgtgtgtgtgtgagtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatgtgtgtgtgtatatgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagcatctCACCGTCTCCAGGAATGATGCGCAGTGTGACGCTGTTTCCCGCCTCTTTGATCAGGTTGACGATGTCGGAGTGTGATTTGTTGGTGATGGAGCAGCTGTTGACCGCCAGGATTCGGTCTCCCACCTTCAGCTTCCCGCAGCGGTCGGCCGGACTGCACTCGATGATCCGTCCGATCTTATGAGGCATCGACACGCAGGAGTTTCCGGCTGAAGCAGCAGATCACAGCATTAACAGCAGAAACAGCTGAACAGCTCACACTGCACATGCAGACTGAgcctctgcaccactgctgcattagaaacattcAGAGGGAACCCAAACCCAAACACCAACACTGACAGATATTCCTCTTCACATGGCAAACGTGCATGAGTCTGTGTACTACAGCATTTCTCAACCATAAGGGACGTAAGTGACTCACCAAGTGTAGTAGCCACGTCAGGCCGTGACACAGACGACACGATGACGAAGCCGAACCCCTCGTTCTCCGCGCGCTGGATCTCCACGTCGTAGGGCAGCAGGGTGGCAGGGGCTGGGGCCACTACAGTGCTACCGCTACCGCCGCCGCCGCCACTGCCGATGCCACTGGTGCTGCCGGAGCCCGAGCTCACGGTGTTCAGAGAGTTCTGGCTGCCCTGCGGAGTGCGCTTCTCCTCGGTCAGAGACGGCGCCTGCGTGCTGCTGTGATGAGACGAGGCCGGGGACGGCGGGACGTCCATCTCTCCCTTATACCCTACAGAGAACACAGAACACCGCGGTGAACCACAGAGGACGGGCATAGACTCCAGAGCtgtggtcagtgtgtgtgtgtgtggtcagtctggtgtgtgtgtatgagcttTACCTCCATACGGGGTCTTGCGGCGCACAGTCAGGTTGACATGGCCCTGTTTGGCCGCCTGCTGCATGAGCTGCACCACCAGCTGATGAGACTTTCCCACCACCGCCGTCCCATCCACACAGATCAGCTCGTCCCCGGAGCGCAGCCGGCCGTCCTCATCCGCTGCCCCGTACTTCACGATGTGGCCGATGTAGATCTGCGCACAGAAGAGAAGAGATCAGCAAGTCAGACGCTACACAGAGCAGTTCAAAAAGTCCTTATGAGCAAAGGTAAATGGAGGTCTGTAATATCGCCTGGTTTAGAGCACACTGGAGCCAGGCCTGGGGTGGGGAACAGCGAGTCCCTGGAGGGCAGGTCTTTCTCCACAAAACACAACCAAACACAGGCCAAGGGAGAGACGAGGGACTGTCCTCCTGTAGACCCACCACCCGCAGATGGAGCCATAAAGGTCGGAGCATTGAGaaacaggcaatggtcaaagACTGGGAGCTTCCTCCAGTGAATGAGAGGGTCACCTACATGTGCCTTTGGGTCAGGGATAGGTCTCTCACTATAGGTTCTGCGTATCGGCCAAACAGCCGTGTAGAGTTCCCAGCCTTCTTGGAGTCTTTGAAGTGCTGGACGGTGCTTCAACTGGGGGTCTTCAAAGCCCCCGTGAACAATATCAGTGATATCTGGAGAGGTGTGATTGGGAGGAGCTGCCTCCCTGATAAAACCCAATAGTGAATCTCTGTTAGACACAGTTTGTCCAGAACAAACACCATATTTTAGAATAAGCGTGTCCATCAGTGGACAATGTTTTCCCAGCGGAGAGAACAGCGCATAAATCCCACAGATGCTCACCTCTGCACACTTGTAGAAACTGTAAAGGAAAAAATGTGTTGAGGGGATgggtttgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgagtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgcgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtttgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtatgtgcgtttgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgcgtttgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtttgtgtgtgtgtgtaactcacTGGTTCTCCTGGTTCATTTCCCCCCAGGATCCGGAAGCCGAAGCCGGTGTCTTTCCTCCAAAGGAAGATGTCTTGTTCTTGGGAGTCTGGCACTGGAAGGAAATCAGATTGCTGGAGATGAAAGTTGAGCACATGACACTGATTTCCCCGTGAGGATCAGTAGCGTTATGTTGGCTGGCAGTGGTGCGTGCTGACTGCTGTAATGCTCTGTCTGCATGTGTAAAGTTGCAGCGGGTCAGAGGGAAAGTATTATTCTCGTTACTCTATTATTAGTCCAGCAGTGATAACGAGATCTCTCCACACACTGAGGCACGGCTGATCTGCGGCCAGCACTgctgctgtgagtgtgtgttattgtgtgtcaGACGCTGCGTTTAATCTCCTGTTGGTCTCAGAGGTCTGGATCTGCCAAGCTGGACCCGTGTGGAGCGTTTAACAGGCCGGCGGGATCTGGCACTGAGCAGGGGAGAGCAATCTGCTGCCGACCGGCCCATACATACGACATCAGCTCAGACTAGCTCTGCCGTACACCGCTAATGCTACACACCGCTAATGCTACACACCGCTAATGCTACACACCACTAATGCTGTATACTGCAAATGCTGGACACCACTAATACTGAGACCAGAGAGCTGTCTGACCGGGCGGTGTATTACAGCTACTAAAACCGTAAATCATGTTTAGTTTCATAGACGGAGCGATCGTCCTGCTTCAGCAGACCTCAGTGTGTCAACAGGAGCCCCGGCTAGTGTCTGgactcatctgtgtgtgtttatgtgtctaATACACCGGTCAGCACTCACTGCCACACCACAGGCCCAGCTCAGAGTCTGCTTCAGCACTGTCCTGAAGAGCGCCCTGCACCCTGACTGagctccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgcatgtgtgtgtgcgtgcgtgcgtgtgtgtgtgcgtgtgtgtgtgcgtgcgtgtgtgtgtgtgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgtgtgcgtgtgtgtgtgtgcgtgtgtgcatgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtacagcagCAGGATGTGTTGATTTGTGTGTGAACGCTCCCTCTGATCAGGACTCACAGCGGCTCTCGTACATGCTCCTGGACTGCGCCCAGATCTTGAAGGGGTCCGGCTTCCTCTGCAGCGTCCCGTTGGGTCCGGGGCCCTCAAAGGCTGGCAGGACGGGCAGCGGCTGGGTGGGTGGCGGGGGGACGGAGGGCGGCTCCTGGGGGCCCGAGGGCTCCTGACGGCCaggagagtctgtgtgtgtgctgcggTGACTACACACACTGTGCTGAGAGCTGCCCTGACTGTCCTTACGCTCCAACtgctgacatacacacacacacacacacacacacacacacacacacacagaaagattaATTTAAAGTGTTGAGCTGGTGAAGAGGTGAAAGAGAAATGATTTAGCACTGGAAGCGGTACATcacattaaattaatattatctgTGGTGTTTATAAAGCAgagctgcgcacacacacacacaaacacacaccatacACTACACTAACTCAGCTCAGTGTTCAGGTCAACCTCAGCTAAAGTCATCTTACCAGGATTTTGGGACTCCTCTTGGGCTGCAGGACCCCTGAGAGACGACAGAGATATGAGAAATCATCAgctcacatcacacacacacacacatacacacacacacacacacacacacatacacacacacacaggtatacacgtacacacccacacacacacacacacacacacacacacacacacagccacacagcCACACTCTCATAAACACGCACAGATaaactctcacaaacacacacacacacacacacagccacactctcataaacacgcacacatacactctcacaaacacacacacacacacacacactcagctgtTTCCGTGTGTTCTCTGGGTTTGTTTCCATGGCGATGCTCAGATTATGGCGGGCTGTGGGCCGGAGCGCTGCTGTACAGACACTCAGTGTTTATTATCTGCCTCTGGACTCATTATGGAGGCGTATTTCTGCTCCAGATAAACACACACGTGTTCATGTCCATCTTTCAGAAGTTTCTGCAGATGCACCATTATTCGGTTCAGTATGTTGACTTTTAGCAGAGTAAATATATAAACCCAcagcagtgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgacatgtAAACAGCTGCCTTTTTATATCCAGTAAATCAGCTGTACACGCTTACACTGTTATACAACTGATCCTCAGGTAAAAGCAGATCCTTCATGCGCTCCTGGCTGTGTGCTGAATGTtaaatcagcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcacacaccggACACTTCATTTCCACGACAACTTCATTTCAACAAGAGCAGCAGACTGTTTTAAACACATCTGTTCATCCCTCACCTCTCCAACACAGGAGGATGTCTTGAGCAGAGCTGCAGATCACGACTGATATTAACCCTTACTCTACCTCAGCTGTCGGTCCAGTGGCGTGCAGCAGGGGGCGGTATACTCTCTAGGGTTAACTCGTGAGtagggccaaacagaatctgaggactttttttttgctattttagtgcagaattttgttaaacatctgtggatttatgcggaatgactttgggagcatcataactaaaacctttatATGTGGATAAAATAAAGATCTGTGTAATTCTGCACGCGCAGACTCCGTGTGTGCCGACATTACCTACACGTTCTGCTGCAGATATTCAGTGTATTGTACATATAAGATGCAAGAGTTATACATCAGCTGTCCATATTCATTACCTTCAGTTTACCCCGATGGTAAAATAGTTGAAATCTCTACAATTGCTGAAGGCCTGCCATCATTCCTGCTCATTTCACCCTGGAAATGCTGATAAGGAGTTTGATTCTGATACTGGAATAGAGGGCTGTCTACCCAATCAGAGAGGGGACAGCAACCTGACGATCACACAGACTGGACCAATCAGGGCAGAGTAGGCTGAGGTTTAGGAGAGAACAGACTCAGCTGACGCTGCAGTGAGCTGAACTGTCTAACGCTCTATTCCTCCACCACTGCAGACAGACACTTTCAGACAGCAGGGCTCACCTCTCTGCACCAGCATGGTGACCTCTCCTCCGCGTGGGCATTTACTGAGCAGATCCACCACCTGGTTGTGGCTCAGGCCCTGCACGCTCCTCTTGTTCACCTCCAGCAGGATATCGCCCTCCTTCAGCCCTCGGCATCGTGGGTAATCCACAATCTGCTTCACTTTCTGTCCTCCGCCAATCAGGCTGTCTGCGATGGTGAAGCCGAAGCCTTTGTCGCCCTTCTCGATGTGTACGGTGATGAGCTCCGGCTGGGTGGCGATGGCTGAGGCGAGGGTCACCACATCGCTGGAGTAGGCCAGGCAGCTGTCCGCCGTCACCAGGAGAGTGTCCTCCGGCACGGCGCTGTACGGGACGGGTTCCAGACCCGGAGCCACACCCACCGACCCCACGCCGGGTGCCATCTGAACCGCCAGCCCGGGCAGAGGCTCGAAGCCCTCCTGACTGTTGACGATGATGGGCTCCTTGTCCAGGATGGCCACTGAGGTCACCAGACTGGTGTTAGGGTCATCGGGGTCAAAGGGCAGAGGGTATCCGCGACACAGCTCCAGCTGGACCATGGAGCCGATGGGGATGGACTGGAATATCTTCACCACCTGAGCGTGAGTGTATCCCAACACGATCGTGTCGTTCACACTGACAATGACGTCACCTGAGGGATGAAGCACACCTGAGTTAGGAGTGCGAGCATGTCTGATGTGGGGTGGAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072569 True 6600 lncRNA 0.52 1 54061697 54068296

Neighbor

gene id symbol gene type direction distance location
XLOC_036828 SLC35E2B coding downstream 70513 53979248 ~ 53991184 (-)
XLOC_036827 cdk11b coding downstream 101348 53948194 ~ 53960349 (-)
XLOC_036826 ubiad1 coding downstream 135469 53918234 ~ 53926228 (-)
XLOC_036825 mib2 coding downstream 164715 53862745 ~ 53896982 (-)
XLOC_036824 CABZ01090219.1 coding downstream 210112 53841302 ~ 53851585 (-)
XLOC_036830 NA coding upstream 1865 54070161 ~ 54075099 (-)
XLOC_036831 rho coding upstream 7899 54076195 ~ 54077740 (-)
XLOC_036832 NA coding upstream 43733 54112029 ~ 54113768 (-)
XLOC_036833 NA coding upstream 98757 54167053 ~ 54168171 (-)
XLOC_036834 mbd4 coding upstream 143565 54211861 ~ 54216600 (-)
XLOC_036822 NA non-coding downstream 279845 53781481 ~ 53781852 (-)
XLOC_036813 NA non-coding downstream 593994 53464218 ~ 53467703 (-)
XLOC_036812 CU914536.1 non-coding downstream 704801 53356779 ~ 53356896 (-)
XLOC_036807 NA non-coding downstream 1126227 52933059 ~ 52935470 (-)

Expression


Co-expression Network