XLOC_036833


Basic Information

Item Value
gene id XLOC_036833
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 54167053 ~ 54168171 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072571
CAGAGACACGTTAGAGTCATCGAAGACACACCAGAGACACGTTAGAGTCATCAAAGACACACCAGAGACACGTTGGAGACACCAGAGACACATTAGAGACACCAGAGAGTCATCAGAGACCCATTAGAGACATTGGAGACACACCATAGACACGTTGGAGACACCAGAGAGACATGAGAGATATCAGAGAGTCATCATTGGAGACATACCACAGACACGTTGGAGACACCAGAGACACATTAGAGACAGCAGACACACATCAGAGACAGGAGGACAGCATCTCCACACGCTCACCTGACTGGAATGGACAGAAGAGCCGCCGACTGCTGTTCAGAGAAACCTGAAAACATGCAGACGCATGAGAAACACAAATAGCTTTGAGTCACgcattactgtgtgtgtgtgtgtgtgtgtgagtctgacCTGCACACACATCTGAGGGTGTTTGTCCACTGCCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072571 True 458 lncRNA 0.49 5 54167053 54168171

Neighbor

gene id symbol gene type direction distance location
XLOC_036832 NA coding downstream 53285 54112029 ~ 54113768 (-)
XLOC_036831 rho coding downstream 89313 54076195 ~ 54077740 (-)
XLOC_036830 NA coding downstream 91954 54070161 ~ 54075099 (-)
XLOC_036829 NA coding downstream 98757 54061697 ~ 54068296 (-)
XLOC_036828 SLC35E2B coding downstream 175869 53979248 ~ 53991184 (-)
XLOC_036834 mbd4 coding upstream 43690 54211861 ~ 54216600 (-)
XLOC_036835 trh coding upstream 52380 54220551 ~ 54223316 (-)
XLOC_036836 exorh coding upstream 134529 54302700 ~ 54304381 (-)
XLOC_036824 CABZ01090219.1 non-coding downstream 315468 53841302 ~ 53851585 (-)
XLOC_036822 NA non-coding downstream 385201 53781481 ~ 53781852 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location