G1757217


Basic Information

Item Value
gene id G1757217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 58250689 ~ 58254043 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2012057
AAGGACTACAAGCATGGGAATCCTAGCCTGattcccagatctgtttgggctGTCTTGCCTAACTCCTAGGTCATGCCTCATTGTCATGCGCAATAACATTCAGTGGTGTGACTATGAcctaggagttggcaagacatgtccaaacagatctgggactctAGACGTCTACAGCACAATCAAAACATAAGGCATTTGTGCTTTAATATCCTGGCATTTGACATTACGATCTTTTGTGGCGAAACATGGCAAATGTCACCTATCTCTCCAGTGGTCCCAAACAGATCCATGCACCTTTGTTGTGGGGTGACCTTTCTTTCGGAgcaatggaataatggaatgatgtaataatggaatgatgtaataatggaatgatggaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatgtaataatggaatgatggaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatggaataatggaataatagaatgatggaataatggaatgatggaataatggaatgatggaataatggaataatagaatgatggaataatagaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatggaataatggaatgatggaataatggaatgatggaataatagaatgatggaataatggaatgatggaataatagaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatggaata
>TU2012056
AAGGACTACAAGCATGGGAATCCTAGCCTGattcccagatctgtttgggctGTCTTGCCTAACTCCTAGGTCATGCCTCATTGTCATGCGCAATAACATTCAGTGGTGTGACTATGAcctaggagttggcaagacatgtccaaacagatctgggactctAGACGTCTACAGCACAATCAAAACATAAGGCATTTGTGCTTTAATATCCTGGCATTTGACATTACGATCTTTTGTGGCGAAACATGGCAAATGTCACCTATCTCTCCAGTGGTCCCAAACAGATCCATGCACCTTTGTTGTGGGGTGACCTTTCTTTCGGAgcaatggaataatggaatgatgtaataatggaatgatgtaataatggaatgatggaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatgtaataatggaatgatggaatgatggaataatagaatgatgtaataatagaatgatggaataatagaatgatggaataatggaatgatggaataatagaatgatggaataatagaatgatgtaataatggaatgatggaataatagaatgatggaataatggaatgatggaataatggaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatggaataatggaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatgtaataatggaatgatggaataatggaatgatggaatgatggaatgatggaataatagaatgatgtaataatggaatgatggaataatggaatgatggaataatggaatgatggaataatggaatgatggaataatggaatgatggaataatagaatgatgtaataatggaatgatggaataatggaatgatggaataatggaatgatggaataatggaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatgtaataatggaatgatggaataatggaatgatggaataatggaatgatggaataatggaatgatggaataatagaatgatggaataatggaatgatggaataatggaatgatggaataatggaatgatggaataatagaatgatggaataatggaataatggaataatagaatgatggaataatagaatgatggaataatagaatgatggaataatggaatgatggaatgatggaataatggaatgatggaataatggaatgatggaataatagaatgatggaataatagaatgatggaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106576325

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2012057 False 827 lncRNA 0.35 2 58250689 58254043
TU2012056 True 1345 lncRNA 0.32 2 58252403 58254043

Neighbor

gene id symbol gene type direction distance location
LOC118942959 NA coding downstream 52439 58195260 ~ 58198250 (-)
LOC110500946 fbxo24 coding downstream 182356 58056547 ~ 58068333 (-)
LOC110500947 zmynd15 coding downstream 194606 58053125 ~ 58056083 (-)
LOC110500948 zmynd15 coding downstream 197705 58043656 ~ 58052984 (-)
paqr9 paqr9 coding downstream 210326 58036498 ~ 58040363 (-)
LOC118942958 NA coding upstream 118107 58372150 ~ 58378475 (-)
LOC110500784 ing2 coding upstream 187124 58441167 ~ 58443946 (-)
LOC110500779 LOC106608532 coding upstream 245216 58499259 ~ 58508480 (-)
LOC110500778 LOC106608531 coding upstream 254533 58508576 ~ 58512400 (-)
LOC110500776 glu2b coding upstream 707218 58961261 ~ 59280662 (-)
G1757139 NA non-coding downstream 70234 58179911 ~ 58180455 (-)
G1757169 NA non-coding downstream 139663 58110315 ~ 58111026 (-)
G1757162 NA non-coding downstream 145884 58103826 ~ 58104805 (-)
G1757130 NA non-coding downstream 207632 58042650 ~ 58043057 (-)
LOC118942957 NA non-coding downstream 218275 58029260 ~ 58035943 (-)
G1757235 NA non-coding upstream 38942 58292985 ~ 58293391 (-)
G1757246 NA non-coding upstream 67431 58321474 ~ 58322027 (-)
G1757249 NA non-coding upstream 69673 58323716 ~ 58327952 (-)
G1757279 NA non-coding upstream 137649 58391692 ~ 58392526 (-)
G1757378 NA non-coding upstream 155910 58409953 ~ 58411684 (-)
G1757074 NA other downstream 341555 57908139 ~ 57909134 (-)
G1757073 NA other downstream 348096 57902086 ~ 57902593 (-)
G1755322 NA other downstream 1843371 56406582 ~ 56407318 (-)
G1755310 NA other downstream 1860123 56390057 ~ 56390566 (-)
G1757692 NA other upstream 546131 58800174 ~ 58805825 (-)
G1758095 NA other upstream 938389 59192432 ~ 59195490 (-)
G1758845 NA other upstream 1769724 60023767 ~ 60024903 (-)
G1758890 NA other upstream 1868499 60122542 ~ 60123364 (-)
G1758915 NA other upstream 1934367 60188410 ~ 60225587 (-)

Expression


Co-expression Network