G1757378



Basic Information


Item Value
gene id G1757378
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 58409953 ~ 58411684 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2012255
ctccAGCACATCTCTAAATTAAAGGGACACAGTATCACATATTCAGTCGTGTCCTtcattacatgttgagtttatgtTCCACACCACTGTACATCAGATACACTGAGGATCCTAAAGTCATACAGCCATACGTTGACAGTCCTGGTAAAGCACGTTTTACAGCTCTGATGCCTAGCAACTGAACCGGTCTCAAAGTGGACAGATTTTCAATTCCCTGGCAGTGATGACAGTACATGGAAGTCTGGCTCATGGTAACAAGAGGTCCAGATCCTTCCACTTTGACAAGCATACAGTACTAGTGAAAACAGATGACACTGCCACCCCTTCACCATTCTCTCACCTCGACCTATTCCCGACGGCACAAATACTAGCACACACCCGTACAAGCTTTCGTTGTTTCAATGCAGCTCACAACTCGCAATCCACCGTCATCACCACCGTTAAAACCAAAATTAGTCACACATTTGGGGTCTCCTCCAAGCAAATGAAAAcagttcataaaaataaaaaagccacATTTTAAACTCCTTCCGATATGACACTAAACCACCTGTATGTGTGACGCCCTCTCAACACGACAGCTTTGACAACTATTGATTCTGTTCAGGTGTAGAGGGACCCCGTCTTCCCTTGGAGCGAAAAAGCGGCCATCTTAGGTGTGGTGTCTTGGGGCAGACTGGAAGGAGTCTACGGAGCAGCGGCCAGGTCAGGTGGTCTGAGTGAGGTCGGGAGACTTCACTTCCTGGTAAAAGCAGTACCAGagacctctccacctcctccacggCATTCTAGTCTTCCTCTTTACCGCCTGTTCTGCTCAACTGCTTGATGACGTCGACCCAGTCCCAGCCTCTGGGGAGCTCCCCCTT

Function


NR:

description
RWD domain-containing protein 4

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2012255 True 869 lncRNA 0.48 2 58409953 58411684

Neighbor


gene id symbol gene type direction distance location
adam19a LOC106608525 coding downstream 18928 58169191 ~ 58391025 (-)
LOC118942958 NA coding downstream 31478 58372150 ~ 58378475 (-)
LOC118942959 NA coding downstream 211703 58195260 ~ 58198250 (-)
LOC110500946 fbxo24 coding downstream 341620 58056547 ~ 58068333 (-)
LOC110500947 zmynd15 coding downstream 353870 58053125 ~ 58056083 (-)
LOC110500784 ing2 coding upstream 29483 58441167 ~ 58443946 (-)
LOC110500779 LOC106608532 coding upstream 87575 58499259 ~ 58508480 (-)
LOC110500778 LOC106608531 coding upstream 96892 58508576 ~ 58512400 (-)
LOC110500776 glu2b coding upstream 549577 58961261 ~ 59280662 (-)
LOC110500775 dmrta1 coding upstream 870485 59282169 ~ 59284125 (-)
G1757279 NA non-coding downstream 17427 58391692 ~ 58392526 (-)
G1757249 NA non-coding downstream 82001 58323716 ~ 58327952 (-)
G1757246 NA non-coding downstream 87926 58321474 ~ 58322027 (-)
G1757235 NA non-coding downstream 116562 58292985 ~ 58293391 (-)
G1757217 NA non-coding downstream 155910 58250689 ~ 58254043 (-)
G1757386 LOC106608527 non-coding upstream 4251 58415935 ~ 58416155 (-)
G1757391 LOC106608527 non-coding upstream 13221 58424905 ~ 58425222 (-)
G1757421 NA non-coding upstream 66219 58477903 ~ 58478581 (-)
G1757440 NA non-coding upstream 118054 58529738 ~ 58529956 (-)
G1757441 NA non-coding upstream 118370 58530054 ~ 58530286 (-)
G1757130 NA other downstream 366896 58042650 ~ 58043057 (-)
G1757074 NA other downstream 500819 57908139 ~ 57909134 (-)
G1757073 NA other downstream 507360 57902086 ~ 57902593 (-)
G1755322 NA other downstream 2002635 56406582 ~ 56407318 (-)
G1755310 NA other downstream 2019387 56390057 ~ 56390566 (-)
G1757692 NA other upstream 388490 58800174 ~ 58805825 (-)
G1758095 NA other upstream 780748 59192432 ~ 59195490 (-)
G1758845 NA other upstream 1612083 60023767 ~ 60024903 (-)
G1758890 NA other upstream 1710858 60122542 ~ 60123364 (-)
G1758915 NA other upstream 1776726 60188410 ~ 60225587 (-)

Expression



Co-expression Network