G1758154 (LOC100194703)



Basic Information


Item Value
gene id G1758154
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59306126 ~ 59306385 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2013140
ggataaagtcattttctctgataaatctcctttccgattgtttggggcatccggaataaagcttgtccggagaagacaaggtgagcgctaccttcggtcctgtgtcatgccaacactaaagcatcctgagaccattcatgtgtggggttgcttctcagccaagggagtgggctcactcacaattttgcctaagaacacagccatgaataaagaatggcaccaacacatcctccgagagcaacttctcccaaccatccagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2013140 True 260 lncRNA 0.48 1 59306126 59306385

Neighbor


gene id symbol gene type direction distance location
LOC110500775 dmrta1 coding downstream 22001 59282169 ~ 59284125 (-)
LOC110500776 glu2b coding downstream 25464 58961261 ~ 59280662 (-)
LOC110500778 LOC106608531 coding downstream 793726 58508576 ~ 58512400 (-)
LOC110500779 LOC106608532 coding downstream 797646 58499259 ~ 58508480 (-)
LOC110500784 ing2 coding downstream 862180 58441167 ~ 58443946 (-)
LOC110500772 rbpms coding upstream 69011 59375396 ~ 59440544 (-)
dctn6 LOC106608510 coding upstream 148330 59454715 ~ 59460683 (-)
trnay-gua-65 NA coding upstream 294136 59600521 ~ 59600607 (-)
trnay-gua-66 NA coding upstream 294814 59601199 ~ 59601285 (-)
trnay-gua-67 NA coding upstream 295490 59601875 ~ 59601961 (-)
G1758138 NA non-coding downstream 14215 59291576 ~ 59291911 (-)
G1758136 NA non-coding downstream 15897 59289983 ~ 59290229 (-)
G1758123 NA non-coding downstream 41613 59264169 ~ 59264513 (-)
G1758111 NA non-coding downstream 77781 59227951 ~ 59228345 (-)
G1758105 NA non-coding downstream 89540 59216085 ~ 59216586 (-)
G1758156 NA non-coding upstream 278 59306663 ~ 59306968 (-)
G1758194 NA non-coding upstream 34059 59340444 ~ 59340811 (-)
G1758177 NA non-coding upstream 37437 59343822 ~ 59348149 (-)
G1758201 NA non-coding upstream 46424 59352809 ~ 59354149 (-)
G1758203 NA non-coding upstream 47971 59354356 ~ 59355198 (-)
G1758095 NA other downstream 110636 59192432 ~ 59195490 (-)
G1757692 NA other downstream 500301 58800174 ~ 58805825 (-)
G1757130 NA other downstream 1263069 58042650 ~ 58043057 (-)
G1757074 NA other downstream 1396992 57908139 ~ 57909134 (-)
G1757073 NA other downstream 1403533 57902086 ~ 57902593 (-)
G1758845 NA other upstream 717382 60023767 ~ 60024903 (-)
G1758890 NA other upstream 816157 60122542 ~ 60123364 (-)
G1758915 NA other upstream 882025 60188410 ~ 60225587 (-)
LOC118942962 LOC106608456 other upstream 1052445 60352810 ~ 60370197 (-)
G1759103 NA other upstream 1222002 60528387 ~ 60528790 (-)

Expression



Co-expression Network