G1758445



Basic Information


Item Value
gene id G1758445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59699294 ~ 59704011 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2013495
attgtgagttcaagtattgttttagggtacctgaaagtggagggatgaagtggaagtgtgcagttaaccaagtgatttaggaatcgaaaccatcctctgctatccaGTTTGCTTTTAGCAATGAAGTGCAAACAGAAGAGAAAAGCTGGGCACATAacacagaggttgatggatcgaagctAACCAATTCTACTTTTAGAAATGAAGtgtaaacagggattttttttttaaatttgagaatttcatgtgcatgtctctgtgccctccgtgattctttttttattactgcttctatcaatccatataggtcatgctgatcacagagagacacagtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2013495 True 335 lncRNA 0.39 2 59699294 59704011

Neighbor


gene id symbol gene type direction distance location
trnar-ucu-105 NA coding downstream 1084 59698138 ~ 59698210 (-)
trnar-ucu-104 NA coding downstream 2088 59697134 ~ 59697206 (-)
trnar-ucu-103 NA coding downstream 3823 59695399 ~ 59695471 (-)
trnar-ucu-102 NA coding downstream 4463 59694759 ~ 59694831 (-)
trnar-ucu-101 NA coding downstream 5103 59694119 ~ 59694191 (-)
trnar-ucu-110 NA coding upstream 245 59704256 ~ 59704328 (-)
trnar-ucu-111 NA coding upstream 1248 59705259 ~ 59705331 (-)
trnar-ucu-112 NA coding upstream 2251 59706262 ~ 59706334 (-)
trnar-ucu-113 NA coding upstream 3254 59707265 ~ 59707337 (-)
trnar-ucu-114 NA coding upstream 4257 59708268 ~ 59708340 (-)
G1758412 NA non-coding downstream 13961 59674010 ~ 59685333 (-)
G1758417 NA non-coding downstream 47625 59612668 ~ 59651669 (-)
G1758428 NA non-coding downstream 61576 59634583 ~ 59637718 (-)
G1758424 NA non-coding downstream 76994 59619228 ~ 59622300 (-)
G1758364 NA non-coding downstream 166076 59516262 ~ 59533218 (-)
trnar-ucu-120 NA non-coding upstream 33130 59737141 ~ 59737451 (-)
G1758587 NA non-coding upstream 157946 59861957 ~ 59862860 (-)
G1758592 NA non-coding upstream 177316 59881327 ~ 59881710 (-)
G1758594 NA non-coding upstream 181257 59885268 ~ 59885664 (-)
G1758602 NA non-coding upstream 208938 59912949 ~ 59913181 (-)
G1758095 NA other downstream 503804 59192432 ~ 59195490 (-)
G1757692 NA other downstream 893469 58800174 ~ 58805825 (-)
G1757130 NA other downstream 1656237 58042650 ~ 58043057 (-)
G1757074 NA other downstream 1790160 57908139 ~ 57909134 (-)
G1757073 NA other downstream 1796701 57902086 ~ 57902593 (-)
G1758845 NA other upstream 319756 60023767 ~ 60024903 (-)
G1758890 NA other upstream 418531 60122542 ~ 60123364 (-)
G1758915 NA other upstream 484399 60188410 ~ 60225587 (-)
LOC118942962 LOC106608456 other upstream 654819 60352810 ~ 60370197 (-)
G1759103 NA other upstream 824376 60528387 ~ 60528790 (-)

Expression



Co-expression Network