G1758900



Basic Information


Item Value
gene id G1758900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 60142817 ~ 60149889 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2014106
cttctgctgaACTTATGACCATCTAGGTTATGGCGTTAGGAAGCATGTGTcacccttcgatagctcagttggtagagcggaggactgtagctgAAATTGTgggaatccttaggtcgctgattCAAATCCTGCTCGAAAGATTGCAtattttcttgtggcttacgccaactttttgacagcagtgcactttgacatgtgcttgacaaacaaGTGATCATTCCTTGAGAgctgaaatcttcacttgttgaccttcaataggaatgttggtagagcagcagagagtactTGAAATTGCAGCAATCTTAAGGTCACTGGTTCACACGAggttaactttttctgcagttgtgccaaaatgTTTATGTTTACCCAAAAGCAATtcattccctgaccgggaatcgattcCGTGGTGCAGCAGTCAGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2014106 True 421 lncRNA 0.44 2 60142817 60149889

Neighbor


gene id symbol gene type direction distance location
trnay-gua-294 NA coding downstream 297 60142434 ~ 60142520 (-)
trnay-gua-293 NA coding downstream 973 60141758 ~ 60141844 (-)
trnay-gua-292 NA coding downstream 1637 60141094 ~ 60150736 (-)
trnay-gua-291 NA coding downstream 2301 60140430 ~ 60140516 (-)
trnay-gua-290 NA coding downstream 3640 60139091 ~ 60139177 (-)
trnay-gua-305 NA coding upstream 1201 60151090 ~ 60151176 (-)
trnay-gua-306 NA coding upstream 1876 60151765 ~ 60151851 (-)
trnay-gua-307 NA coding upstream 2541 60152430 ~ 60152516 (-)
trnay-gua-308 NA coding upstream 3205 60153094 ~ 60153180 (-)
trnay-gua-309 NA coding upstream 3880 60153769 ~ 60153855 (-)
G1758894 NA non-coding downstream 10103 60128847 ~ 60132714 (-)
G1758849 NA non-coding downstream 34731 60042706 ~ 60108086 (-)
G1758854 NA non-coding downstream 50262 60088282 ~ 60092555 (-)
G1758844 NA non-coding downstream 108932 60019022 ~ 60033885 (-)
G1758652 NA non-coding downstream 147198 59995363 ~ 59995619 (-)
G1758922 NA non-coding upstream 48823 60198712 ~ 60199064 (-)
G1758923 NA non-coding upstream 50172 60200061 ~ 60202158 (-)
G1758927 NA non-coding upstream 55441 60205330 ~ 60242524 (-)
G1758930 NA non-coding upstream 63711 60213600 ~ 60213960 (-)
G1758979 NA non-coding upstream 166720 60316609 ~ 60329609 (-)
G1758890 NA other downstream 19453 60122542 ~ 60123364 (-)
G1758845 NA other downstream 117914 60023767 ~ 60024903 (-)
G1758095 NA other downstream 947327 59192432 ~ 59195490 (-)
G1757692 NA other downstream 1336992 58800174 ~ 58805825 (-)
G1757130 NA other downstream 2099760 58042650 ~ 58043057 (-)
G1758915 NA other upstream 38521 60188410 ~ 60225587 (-)
LOC118942962 LOC106608456 other upstream 208941 60352810 ~ 60370197 (-)
G1759103 NA other upstream 378498 60528387 ~ 60528790 (-)
G1759186 NA other upstream 502071 60651960 ~ 60652756 (-)
G1759503 NA other upstream 774507 60924396 ~ 60938917 (-)

Expression



Co-expression Network