G1758746



Basic Information


Item Value
gene id G1758746
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 60216582 ~ 60216977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2013901
aataagttgggtgaatttttgttgtccttaagagaCTGcgttgagccattttgccacaactttggaagtatgcttggggtcattgtccatttgaaagacaagctttaacttcctaactgatgtcttgagatgttgcatcaatatatcccCATAATTGCCCTAcctcatgatggcatctattttttattaaagtgcaccagtccctcctgcagcaaagcacccccacaacatgatgctgccacccccg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2013901 True 247 lncRNA 0.43 2 60216582 60216977
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110500788 LOC106608498 coding upstream 86947 60125015 ~ 60129635 (+)
LOC118942961 LOC106608493 coding upstream 106208 60089893 ~ 60110374 (+)
LOC118942813 LOC106608496 coding upstream 126432 60086040 ~ 60090150 (+)
LOC110500904 NA coding upstream 133544 60005761 ~ 60123961 (+)
LOC110500789 LOC106608496 coding upstream 160979 60036086 ~ 60055603 (+)
LOC110500950 LOC106608479 coding downstream 40204 60257181 ~ 60272808 (+)
LOC118942814 LOC106578145 coding downstream 67648 60284625 ~ 60307905 (+)
LOC118943030 NA coding downstream 102626 60319603 ~ 60319710 (+)
LOC110500797 4f2 coding downstream 396413 60613390 ~ 60629257 (+)
LOC110500798 LOC106608478 coding downstream 415435 60632412 ~ 60654106 (+)
G1758666 NA non-coding upstream 28965 60130890 ~ 60187617 (+)
G1758673 NA non-coding upstream 195291 60016248 ~ 60021291 (+)
G1758665 NA non-coding upstream 210916 60005433 ~ 60005666 (+)
G1758784 NA non-coding downstream 95254 60312231 ~ 60313527 (+)
G1758782 NA non-coding downstream 96696 60313673 ~ 60314671 (+)
G1758802 NA non-coding downstream 100501 60317478 ~ 60329254 (+)
G1758788 NA non-coding downstream 127445 60344422 ~ 60345077 (+)
G1758818 NA non-coding downstream 134669 60351646 ~ 60353092 (+)
G1757578 NA other upstream 1530059 58683137 ~ 58686523 (+)
rwdd rwdd4 other upstream 1806503 58405236 ~ 58411726 (+)
G1756789 NA other upstream 2288338 57926480 ~ 57928244 (+)
G1755570 NA other upstream 3422008 56793731 ~ 56794574 (+)
G1755158 NA other upstream 3828960 56386407 ~ 56387622 (+)
G1758801 NA other downstream 105238 60322215 ~ 60326620 (+)
G1758786 NA other downstream 141853 60358349 ~ 60359351 (+)
G1759168 LOC101154678 other downstream 505181 60722158 ~ 60722472 (+)
G1759267 NA other downstream 593225 60810202 ~ 60810620 (+)

Expression


G1758746 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
End of interactive chart.

G1758746 Expression in each Bioproject

Bar chart with 11 bars.
G1758746 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network