G1762051


Basic Information

Item Value
gene id G1762051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 64660473 ~ 64662434 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2018606
atgctgtttaatcagcttttttttgttgtccgtatggaacatttcagtaTATTTCCAATCCATTGTAATGCACTTTTAATTACATGGGCGCTTATTGACATTTTGATTGGCATCGAGTAGCAGTTCattcagatcagatcagatcagacatgcttcaaatcaaatcaaatcaaagtttatttgtcacgtgcgccgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgcttaatacaacaggtgtagtagacctcacagtgaaatgcttaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatactacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatactacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatactacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatactacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctgacagtgaaatgcttaatacaacaggtgtagtagacctcacagtgaaatgcttaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgcttaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgcttacttacaggctctaaccaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2018606 True 1506 lncRNA 0.40 3 64660473 64662434

Neighbor

gene id symbol gene type direction distance location
LOC110509409 LOC106593257 coding downstream 12668 64590607 ~ 64647805 (-)
LOC118942817 LOC106608410 coding downstream 127103 64525897 ~ 64533370 (-)
cnga1b cnga1 coding downstream 142435 64483522 ~ 64518038 (-)
nfxl1 nfxl1 coding downstream 179486 64384916 ~ 64480987 (-)
LOC118942981 NA coding downstream 272665 64386561 ~ 64387808 (-)
LOC118942818 LOC106608414 coding upstream 51388 64663711 ~ 64723784 (-)
LOC118942984 LOC106592811 coding upstream 114132 64776566 ~ 64790358 (-)
LOC118942819 LOC106595717 coding upstream 261055 64923489 ~ 64930766 (-)
G1761976 NA non-coding downstream 22513 64637253 ~ 64637960 (-)
G1761975 NA non-coding downstream 22808 64635672 ~ 64637665 (-)
G1761974 NA non-coding downstream 25102 64634935 ~ 64635371 (-)
G1761963 NA non-coding downstream 46646 64613066 ~ 64613827 (-)
G1762063 NA non-coding upstream 17123 64679557 ~ 64681616 (-)
G1762093 NA non-coding upstream 105096 64767530 ~ 64771665 (-)
G1762091 NA non-coding upstream 109821 64772255 ~ 64772569 (-)
G1762092 NA non-coding upstream 110430 64772864 ~ 64773751 (-)
G1761826 NA other downstream 242421 64417310 ~ 64418052 (-)
LOC110517683 LOC106592125 other downstream 436985 64205352 ~ 64223639 (-)
LOC110498011 LOC106608403 other downstream 828079 63823210 ~ 63832447 (-)
LOC118942979 NA other downstream 1030626 63542492 ~ 63629859 (-)
G1762080 NA other upstream 86070 64748504 ~ 64749274 (-)
G1762085 NA other upstream 91273 64753707 ~ 64754499 (-)
G1762162 NA other upstream 194074 64856508 ~ 64857185 (-)

Expression


Co-expression Network