G1762085


Basic Information

Item Value
gene id G1762085
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 64753707 ~ 64754499 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2018643
tctctctccgtgcaGAGCTGGATGGCTCCCAGGAAGGGTCTTCCAGATGCCGTGACTTATATTTCCTCTTCCCACCCGGCTTGTCGGAGCGTGGGGAATGTCGGGAATGCTGTCTGTGTACAGAGAGATGGGACAGGGAGCTGGAGGAAGAGAGGCTGTCAGAGGACCGGGAATGCCGGTGTTCCCCAGGAGATTCTGGTCCTCGCTGGCTACTCCGGGATAAGGACGGGGAATGGGATAGGACGCTGTTTTCCGGACTAAAGAATATTCCCGTGTTAGAATATTGGGACCTGGCTGGTTCATATggaatcctttctctctctctacctctgctcctctcacttcctccactggtctctctcctgtgctCTCTGCTGTGTTGTCTGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTTCCTTTCTCCCGTCTCCTTTTCTCCCGCTCTCTCGCCCGTCTCTTCCGGCGCCGTTCCTGGCTGCTGTCGTCGCTCCGTACGGACACGGGGCTCCGTGCTGACCAGCTCCGTTCAGAACTCCTGGACCGACCGGACCGCGACCAAACGCTCGCTGACCGATGTCTGCTTCTGGACCGCGATCCTGAACACGACCGCTCTCGGTGTctgccctcccttctctcccctagAGGGGAATAGAGCAGTCTCTCTtctacctgctctctctctctgtctagatgTCTTACTCCCAG
>TU2018644
tctctctccgtgcaGAGCTGGATGGCTCCCAGGAAGGGTCTTCCAGATGCCGTGACTTATATTTCCTCTTCCCACCCGGCTTGTCGGAGCGTGGGGAATGTCGGGAATGCTGTCTGTGTACAGAGAGATGGGACAGGGAGCTGGAGGAAGAGAGGCTGTCAGAGGACCGGGAATGCCGGTGTTCCCCAGGAGATTCTGGTCCTCGCTGGCTACTCCGGGATAAGGACGGGGAATGGGATAGGACGCTGTTTTCCGGACTAAAGAATATTCCCGTGTTAGAATATTGGGACCTGGCTGGTTCATATggaatcctttctctctctctacctctgctcctctcacttcctccactggtctctctcctgtgctCTCTGCTGTGTTGTCTGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTTCCTTTCTCCCGTCTCCTTTTCTCCCGCTCTCTCGCCCGTCTCTTCCGGCGCCGTTCCTGGCTGCTGTCGTCGCTCCGTACGGACACGGGGCTCCGTGCTGACCAGCTCCGTTCAGAACTCCTGGACCGACCGGACCGCGACCAAACGCTCGCTGACCGATGTCTGCTTCTGGACCGCGATCCTGAACACGACCGCTCTCGGTGTctgccctcccttctctcccctagAGGGGAATAGAGCAGTCTCTCTtctacctgctctctctctctgt

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase Topors

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2018643 False 793 TUCP 0.59 1 64753707 64754499
TU2018644 True 774 TUCP 0.59 1 64753726 64754499

Neighbor

gene id symbol gene type direction distance location
LOC118942818 LOC106608414 coding downstream 29923 64663711 ~ 64723784 (-)
LOC110509409 LOC106593257 coding downstream 105902 64590607 ~ 64647805 (-)
LOC118942817 LOC106608410 coding downstream 220337 64525897 ~ 64533370 (-)
cnga1b cnga1 coding downstream 235669 64483522 ~ 64518038 (-)
LOC118942981 NA coding downstream 365899 64386561 ~ 64387808 (-)
LOC118942984 LOC106592811 coding upstream 22067 64776566 ~ 64790358 (-)
LOC118942819 LOC106595717 coding upstream 168990 64923489 ~ 64930766 (-)
G1762063 NA non-coding downstream 72091 64679557 ~ 64681616 (-)
G1762051 NA non-coding downstream 91273 64660473 ~ 64662434 (-)
G1761976 NA non-coding downstream 115747 64637253 ~ 64637960 (-)
G1761975 NA non-coding downstream 116042 64635672 ~ 64637665 (-)
G1762093 NA non-coding upstream 13031 64767530 ~ 64771665 (-)
G1762091 NA non-coding upstream 17756 64772255 ~ 64772569 (-)
G1762092 NA non-coding upstream 18365 64772864 ~ 64773751 (-)
G1762094 NA non-coding upstream 20520 64775019 ~ 64775827 (-)
G1762099 NA non-coding upstream 37638 64792137 ~ 64792374 (-)
G1762080 NA other downstream 4433 64748504 ~ 64749274 (-)
G1761826 NA other downstream 335655 64417310 ~ 64418052 (-)
LOC110517683 LOC106592125 other downstream 530219 64205352 ~ 64223639 (-)
LOC110498011 LOC106608403 other downstream 921313 63823210 ~ 63832447 (-)
G1762162 NA other upstream 102009 64856508 ~ 64857185 (-)

Expression


Co-expression Network