G1762162


Basic Information

Item Value
gene id G1762162
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 64856508 ~ 64857185 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2018731
TCGAAGGTGTTTCAGGGTTCAGTCTGTCCGACATCAACTCAGAGTTCTCATCCGAGACAAACACCTGGTTCCTTCCtgcttcatcctcttcctcttctaaCAGGGCAGGACAGTCACTCTCGTCTTCATCCATCTCTTCTGCTTCCTCGCCTTCAACTCCTTGCTCGttctcatcatcatcctcctttctacattcctcctcttcctctccattcCGCTCCCCCTCTTCTTCAGTCTGGGTACTGTGGGAGGTTTTTGATTGGCCATCTCTTTCCCTAGCCGCGCTCTCATCGGCTGTTACCTCGACGTGACCGGCGACAGTTCCGAACGGTTCCGAGGGGCAGGACTCCTCCGCTATGGTAACTATGGAAATGCtgaccacctccccctcctctctgccaataaactcctcaccacctccctttctcctttcttccccagaggaagatgaagagatgaaggaagagagggaggagattgaagagatggaggaggaagagggggtgcTGCCTAGCAGCGATACCCCCATAGAGTCTCCCCTCCCTGGCA
>TU2018734
ccaggtatttccaaagggtttaCATACTTTTCCTTGCCTCTGTACGTCACAATGGGATACCGGACTATCCCGTCTCTGGACTCTGAATTAGAGGGGAGAGGTGTGTTCTTACCTTGATGTTGAGGAGTGTCGAAGGTGTTTCAGGGTTCAGTCTGTCCGACATCAACTCAGAGTTCTCATCCGAGACAAACACCTGGTTCCTTCCtgcttcatcctcttcctcttctaaCAGGGCAGGACAGTCACTCTCGTCTTCATCCATCTCTTCTGCTTCCTCGCCTTCAACTCCTTGCTCGttctcatcatcatcctcctttctacattcctcctcttcctctccattcCGCTCCCCCTCTTCTTCAGTCTGGGTACTGTGGGAGGTTTTTGATTGGCCATCTCTTTCCCTAGCCGCGCTCTCATCGGCTGTTACCTCGACGTGACCGGCGACAGTTCCGAACGGTTCCGAGGGGCAGGACTCCTCCGCTATGGTAACTATGGAAATGCtgaccacctccccctcctctctgccaataaactcctcaccacctccctttctcctttcttccccagaggaagatgaagagatgaaggaagagagggaggagattgaagagatggaggaggaagagggggtgcTGCCTAGCAGCGATACCCCCATAGAGTCTCCCCTCCCTGGCA
>TU2018732
TCGAAGGTGTTTCAGGGTTCAGTCTGTCCGACATCAACTCAGAGTTCTCATCCGAGACAAACACCTGGTTCCTTCCtgcttcatcctcttcctcttctaaCAGGGCAGGACAGTCACTCTCGTCTTCATCCATCTCTTCTGCTTCCTCGCCTTCAACTCCTTGCTCGttctcatcatcatcctcctttctacattcctcctcttcctctccattcCGCTCCCCCTCTTCTTCAGTCTGGGTACTGTGGGAGGTTTTTGATTGGCCATCTCTTTCCCTAGCCGCGCTCTCATCGGCTGTTACCTCGACGTGACCGGCGACAGTTCCGAACGGTTCCGAGGGGCAGGACTCCTCCGCTATGGTAACTATGGAA

Function

NR:

description
F-box/WD repeat-containing protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2018731 False 549 lncRNA 0.54 1 64856508 64857056
TU2018734 False 678 TUCP 0.53 1 64856508 64857185
TU2018732 True 371 lncRNA 0.53 1 64856686 64857056

Neighbor

gene id symbol gene type direction distance location
LOC118942984 LOC106592811 coding downstream 66150 64776566 ~ 64790358 (-)
LOC118942818 LOC106608414 coding downstream 132724 64663711 ~ 64723784 (-)
LOC110509409 LOC106593257 coding downstream 208703 64590607 ~ 64647805 (-)
LOC118942817 LOC106608410 coding downstream 323138 64525897 ~ 64533370 (-)
cnga1b cnga1 coding downstream 338470 64483522 ~ 64518038 (-)
LOC118942819 LOC106595717 coding upstream 66433 64923489 ~ 64930766 (-)
G1762160 NA non-coding downstream 1028 64855203 ~ 64855480 (-)
G1762159 NA non-coding downstream 1310 64854940 ~ 64855198 (-)
G1762125 NA non-coding downstream 2929 64853048 ~ 64853579 (-)
G1762121 NA non-coding downstream 10492 64845498 ~ 64846016 (-)
G1762118 NA non-coding downstream 12839 64843054 ~ 64843669 (-)
G1762164 NA non-coding upstream 2752 64859808 ~ 64860137 (-)
G1762167 NA non-coding upstream 8637 64865693 ~ 64865999 (-)
G1762170 NA non-coding upstream 16827 64873883 ~ 64875504 (-)
G1762171 NA non-coding upstream 20295 64877351 ~ 64877594 (-)
G1762175 NA non-coding upstream 25184 64882240 ~ 64882459 (-)
G1762085 NA other downstream 102009 64753707 ~ 64754499 (-)
G1762080 NA other downstream 107234 64748504 ~ 64749274 (-)
G1761826 NA other downstream 438456 64417310 ~ 64418052 (-)
LOC110517683 LOC106592125 other downstream 633020 64205352 ~ 64223639 (-)

Expression


Co-expression Network