XLOC_003691


Basic Information

Item Value
gene id XLOC_003691
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 42098047 ~ 42098291 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008427
CTGACACATGgaaatgtgtgtgtacatgttaaaatataataaaaaagaattgggggaaatttataataatttcagCAATATTATTGTGTTCATGTGAttaatttacaatacagtttgtaaagtaatattttctgtcttttagtagatctatttTAAGCCTATGAGAGACTTTGTttattaagtggatctaattaaaTTTCCAttgtaaacatcaaataaaatttaaatattattatttttgttta

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008427 True 245 lncRNA 0.22 1 42098047 42098291

Neighbor

gene id symbol gene type direction distance location
XLOC_003689 NA coding upstream 28383 42042559 ~ 42069664 (+)
XLOC_003690 NA coding upstream 43446 42053251 ~ 42054601 (+)
XLOC_003688 NA coding upstream 61058 42035787 ~ 42036989 (+)
XLOC_003687 NA coding upstream 79920 42014003 ~ 42018127 (+)
XLOC_003686 her15.1 coding upstream 113560 41981959 ~ 41984487 (+)
XLOC_003692 NA coding downstream 29124 42127415 ~ 42131907 (+)
XLOC_003693 CU138553.1 coding downstream 206798 42305089 ~ 42418374 (+)
XLOC_003694 dennd6aa coding downstream 324080 42422371 ~ 42459902 (+)
XLOC_003695 si:ch1073-165f9.2 coding downstream 376403 42474694 ~ 42477772 (+)
XLOC_003696 zgc:110286 coding downstream 379893 42478184 ~ 42481817 (+)
XLOC_003369 CR854846.2 misc upstream 25974965 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 29386051 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 29403784 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 29412448 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 29418019 12679732 ~ 12680028 (+)
XLOC_003684 NA non-coding upstream 163428 41933100 ~ 41934619 (+)
XLOC_003700 FP067440.1 non-coding downstream 473951 42572242 ~ 42572982 (+)
XLOC_003703 LO017916.1 non-coding downstream 527080 42625371 ~ 42625487 (+)
XLOC_003707 NA non-coding downstream 741559 42839850 ~ 42883298 (+)

Expression


Co-expression Network