klf5b (LOC106586047)


Basic Information

Item Value
gene id klf5b
gene name LOC106586047
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 1420358 ~ 1428026 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578621.2
caatacaaGCCCAGCTCCGCCCACCCTGCTATCATGCAGTTGTGTAATTTGAGAAGCACATACGCAAAACAGATAGCATATGCAGAATTTGACAGCTGCCTGGCTTGAGCTATTTGTTCAAATCAGAACTATTCCTATGATAAATTATTCATTTTGCCCAATTTCGCGGGCTACTGGACTTAACATTATCAGCGTTTATGGCCACTGACTTGTTAACGAATAATGTTTGGTTTGCTCTGGATCAGGACGCGCTCGACAACCATAAACTCGCCGCACCACCAATGGCACGcgggatgagaagaggaggaggaggagaagaagaagaaggagaaggtcAGGGACATGGACAAGTCCTCTACAACATGAGGAATACAATCAGTGGCAGCTCTTCATTCCACGACTACAATCTGGGTAAATCTGAGATGGACAAATATCTGTCCCCTTATCCTCAGGAAGTACCAGACTCCAGACAGACATCTTTCACAGAGGACCTTAGTTCCCCATACAGCATCAACATGAGCCTTCTCTTCCCTGACATCACTTACCTGAGCCCGGACATATGTCGGCCTATGAGACCCATCAAGACAgagcctctctcccactccctcatgCACCCCAGTTGCCACGGCAACCTTGGTCCAACAACCCTTCTAGAACACCCTGGGCTTTATGGTGCTTCAACAGACACAGGAAGTAGCATGTTCATCAAACAGGAAATGCACACCCTGGACTTCCCAGATGTTCCGTTGTTCCAGCTATTGAACTCTGAGCTAGAGCAGCTGGTGCCTAGTCGTCCAGTGAACTCAGACCTCCACAGCGGGGTCCCCGTGTCCGCCTTGTCATTCCCTTTCAGCAACGTCCACTTATCATCCCCCCAGAGTGCTGTCAAATCTATGGGATGCCCACAAAATGGTGGCTATACTCTGCAAACCCAGTTCGCAAGCCATTCGCAGCAGCGACCAGCCTATCTTCCTCTGTCCCCGCCCAACTCCAAGCCAGGGAGCCCGGACAGAGGGAAAGAGCTGATCCAGAATCTGTTTCTGCCTCCATCCTATGCAGCAAGGATTGCCTCGAATCTGAGTCCTGGTCTTATGCCAGTCCAAAGCTCAGGTCTAGGACTTGTTCAGAGTCCAGGTCTTGGACAAGGCCAAAGTTCTAGACTTGGAGCAGGCCTGAGCCCCGGTGTTGGGCCAGTGTCCCCAGCGTTGGCCCAGACAGGTCCGGGGAAGTGTAACCGCAGGAATAACCCtgacctggagaggaggaggatacatCACTGTGACTTTTCTGCATGTAAGAAAGTCTACACCAAGTCCTCCCATTTAAAGGCCCATTTACGGACACATACAGGAGAGAAGCCATACCAATGCTCCTGGGAGGGGTGCGAGTGGTGCTTCGCTCGTTCCGACGAGCTGACTCGCCACTTCAGGAAACACACAGGGGCCAAGCCCTtccagtgtggtgtgtgtaaccGCTGTTTCTCCCGGTCTGACCACCTGGCTCTACACACGAAGAAGCACCAGAGATAGGGAAACCTACAtaaatcatatttttttattaGATCTAATTCAAATGAAACATTAGATTTAAGTTAATCTCAACACAATACAATTGTGACTGCAACATGGGTGTAGATTTTCCATGTATTTATTTTAGTGTATACTGCCATAGTTAGATTTTTTAGGAAGAGCTCAAAGGTGGATTGAGTCAAGCTATAATGACAAACGAGCTCCTTTTAGTATCTCTATGGTTTATCTACAGCAGTTTCCCAAACCTCTGCTCAAGTACCCCCAGCCATTCCACGTATTTGATCTATTCCGGTACTAGGACATCTGATTCAACCAATCATGTTTGATGATGAGTTGaccagttgaatcaggtgtgctagtacTGGAATATATCGAACAAGTGTAACAGTAGGGGGTACTCAATGAGAGGTTTAGAAAATGTAAACCCAGATCTACTGTATCATCGCTTCCTTTTCTACTGAGTATTGGCACTGAAAGACAATATTTGACAATGTATTGCTATTGACATTTAGGTATAACTACCTTTCATTGCTGTAGACCATGTACAAAGGGAAGTCGAAGTATTTTTAAATACAAATTGTTAAAAAATAATATCATGCACTATACTGATTTTCTAAGTGCCTTTTAAAGCTAGactccttagttgctacatccatttttggactcatAAATGAATGACATATAACCATTGATTCTTGAGGtgtataacttataaatgcctcatgagcttagttcaacttgttttactccaatgtttgtaaacagcATAAATGtgaaacactgtatagcctccaaacatggttaaaactatacatTTGATGTCATGAATGGTCTGTCCTTAcatctctgtctatgaatttgagtggttacatttccaaTCCCTTCGATTTTTAGCAAAACGAGCAGGAgtacgctttgttattgtttaatTAAGGATTCTACCTGTAATGTTTTATAAATTAATTAAAGATGACGTAAAAGACCA
>TU2020381
gaggaggagaagaagaagaaggagaaggtcAGGGACATGGACAAGTCCTCTACAACATGAGGAATACAATCAGTGGCAGCTCTTCATTCCACGACTACAATCTGGGTAAATCTGAGATGGACAAATATCTGTCCCCTTATCCTCAGGAAGTACCAGACTCCAGACAGACATCTTTCACAGAGGACCTTAGTTCCCCATACAGCATCAACATGAGCCTTCTCTTCCCTGACATCACTTACCTGAGCCCGGACATATGTCGGCCTATGAGACCCATCAAGACAgagcctctctcccactccctcatgCACCCCAGTTGCCACGGCAACCTTGGTCCAACAACCCTTCTAGAACACCCTGGGCTTTATGGTGCTTCAACAGACACAGGAAGTAGCATGTTCATCAAACAGGAAATGCACACCCTGGACTTCCCAGATGTTCCGTTGTTCCAGCTATTGAACTCTGAGCTAGAGCAGCTGGTGCCTAGTCGTCCAGTGAACTCAGACCTCCACAGCGGGGTCCCCGTGTCCGCCTTGTCATTCCCTTTCAGCAACGTCCACTTATCATCCCCCCAGAGTGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578621.2 False 2514 mRNA 0.45 4 1420358 1428026
TU2020381 True 578 TUCP 0.51 2 1424721 1427720

Neighbor

gene id symbol gene type direction distance location
uchl3 uchl3 coding downstream 548873 858239 ~ 871485 (-)
LOC110501241 lmo7 coding downstream 567100 715056 ~ 853258 (-)
acod1 acod1 coding downstream 798418 617941 ~ 621940 (-)
cln5 cln5 coding downstream 804446 610227 ~ 615912 (-)
scel scel coding downstream 1160234 232766 ~ 260124 (-)
LOC118943628 NA coding upstream 97921 1525947 ~ 1531974 (-)
gpr18 gpr18 coding upstream 579928 2007954 ~ 2013062 (-)
gpr183a ebi2 coding upstream 588042 2016068 ~ 2042770 (-)
LOC110501251 NA coding upstream 1014433 2442459 ~ 2466932 (-)
zic5 zic5 coding upstream 1056095 2484121 ~ 2489060 (-)
G1763635 NA non-coding downstream 4887 1414989 ~ 1415471 (-)
G1763633 NA non-coding downstream 6690 1413390 ~ 1413668 (-)
G1763631 NA non-coding downstream 7914 1407531 ~ 1412444 (-)
G1763632 NA non-coding downstream 20383 1399589 ~ 1399975 (-)
G1763629 NA non-coding downstream 22332 1397763 ~ 1398026 (-)
G1763668 NA non-coding upstream 39416 1467442 ~ 1467824 (-)
G1763785 NA non-coding upstream 120626 1548652 ~ 1548972 (-)
G1763790 NA non-coding upstream 122631 1550657 ~ 1550876 (-)
G1763791 NA non-coding upstream 127147 1555173 ~ 1555401 (-)
G1763816 NA non-coding upstream 133987 1562013 ~ 1563363 (-)
G1763459 NA other downstream 200641 1218802 ~ 1219717 (-)
G1762219 LOC106593246 other downstream 1315001 86357 ~ 105357 (-)
G1766126 NA other upstream 1897695 3325721 ~ 3326343 (-)
fgf14 fgf14 other upstream 2019405 3447431 ~ 3774567 (-)
G1769281 NA other upstream 4372735 5800761 ~ 5825307 (-)
G1769618 NA other upstream 4532124 5960150 ~ 5960815 (-)
G1771092 NA other upstream 5823758 7251784 ~ 7256717 (-)

Expression

klf5b(LOC106586047) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 80.
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klf5b(LOC106586047) Expression in each Bioproject

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klf5b(LOC106586047) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network