Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110501285 |
| gene name | LOC106581661 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 5963937 ~ 5968545 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C-X-C chemokine receptor type 1-like |
| id | name | namespace |
|---|---|---|
| GO:0019221 | cytokine-mediated signaling pathway | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021578731.2 | False | 1676 | mRNA | 0.50 | 4 | 5963937 | 5968545 |
| XM_036958566.1 | True | 1591 | mRNA | 0.51 | 3 | 5963937 | 5968545 |
5,959,000
5,960,000
5,961,000
5,962,000
5,963,000
5,964,000
5,965,000
5,966,000
5,967,000
5,968,000
5,969,000
5,970,000
5,971,000
5,972,000
NC_048586.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501283 | LOC106581680 | coding | downstream | 63551 | 5805613 ~ 5900386 (-) |
| LOC110501282 | LOC106581679 | coding | downstream | 175269 | 5741280 ~ 5788668 (-) |
| LOC110501280 | LOC106581675 | coding | downstream | 351654 | 5437037 ~ 5612283 (-) |
| pcbp3 | LOC106581674 | coding | downstream | 546038 | 5244401 ~ 5417899 (-) |
| lrrc3 | LOC106581660 | coding | downstream | 737578 | 5224562 ~ 5226359 (-) |
| nabp1a | LOC106581684 | coding | upstream | 1869 | 5970414 ~ 5995011 (-) |
| trnas-cga-33 | NA | coding | upstream | 27021 | 5995566 ~ 5995647 (-) |
| LOC110502106 | NA | coding | upstream | 41286 | 6003661 ~ 6014297 (-) |
| LOC110501287 | LOC106581685 | coding | upstream | 50133 | 6018678 ~ 6042189 (-) |
| LOC110501288 | LOC106581686 | coding | upstream | 113835 | 6082380 ~ 6226566 (-) |
| G1769613 | NA | non-coding | downstream | 1641 | 5961640 ~ 5962296 (-) |
| G1769614 | NA | non-coding | downstream | 2490 | 5961028 ~ 5961447 (-) |
| G1769609 | NA | non-coding | downstream | 5122 | 5958597 ~ 5958815 (-) |
| G1769607 | NA | non-coding | downstream | 7167 | 5956528 ~ 5956770 (-) |
| G1769604 | NA | non-coding | downstream | 11798 | 5951923 ~ 5952139 (-) |
| G1769650 | NA | non-coding | upstream | 89389 | 6057934 ~ 6058153 (-) |
| G1769579 | NA | non-coding | upstream | 119815 | 6088360 ~ 6102892 (-) |
| G1769689 | NA | non-coding | upstream | 170115 | 6138660 ~ 6176150 (-) |
| G1769618 | NA | other | downstream | 3122 | 5960150 ~ 5960815 (-) |
| G1769281 | NA | other | downstream | 138630 | 5800761 ~ 5825307 (-) |
| fgf14 | fgf14 | other | downstream | 2189928 | 3447431 ~ 3774567 (-) |
| G1766126 | NA | other | downstream | 2637594 | 3325721 ~ 3326343 (-) |
| klf5b | LOC106586047 | other | downstream | 4536217 | 1420358 ~ 1428026 (-) |
| G1771092 | NA | other | upstream | 1283239 | 7251784 ~ 7256717 (-) |
| G1771426 | LOC106582012 | other | upstream | 1493668 | 7462213 ~ 7464692 (-) |
| LOC110501323 | LOC106581977 | other | upstream | 2656477 | 8624815 ~ 8684792 (-) |
| LOC110501325 | LOC106581976 | other | upstream | 2768634 | 8737175 ~ 8758540 (-) |
| LOC110502107 | grk1 | other | upstream | 2794747 | 8763292 ~ 8768047 (-) |
