Gene
RNA
| Item | Value |
|---|---|
| gene id | mitd1 |
| gene name | mitd1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 7993374 ~ 8006327 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mitd1 | Predicted to be involved in midbody abscission. Predicted to colocalize with midbody. Orthologous to human MITD1 (microtubule interacting and trafficking domain containing 1). |
| description |
|---|
| MIT domain-containing protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036958606.1 | False | 1291 | mRNA | 0.47 | 8 | 7993374 | 8006327 |
| XM_021578780.2 | True | 1622 | mRNA | 0.44 | 7 | 7996976 | 8006327 |
7,992,000
7,994,000
7,996,000
7,998,000
8,000,000
8,002,000
8,004,000
8,006,000
8,008,000
8,010,000
8,012,000
8,014,000
8,016,000
8,018,000
8,020,000
8,022,000
NC_048586.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501308 | txndc9 | coding | upstream | 1156 | 7988815 ~ 7992218 (+) |
| rev1 | rev1 | coding | upstream | 14888 | 7956370 ~ 7978486 (+) |
| aff3 | aff3 | coding | upstream | 38885 | 7912166 ~ 7954489 (+) |
| LOC118943576 | NA | coding | upstream | 477007 | 7515353 ~ 7516367 (+) |
| LOC110501295 | LOC106582015 | coding | upstream | 505074 | 7480701 ~ 7488300 (+) |
| cracdla | LOC106582029 | coding | downstream | 10585 | 8016912 ~ 8025026 (+) |
| creg2 | creg2 | coding | downstream | 19036 | 8025363 ~ 8027524 (+) |
| mgat4a | mgat4a | coding | downstream | 21589 | 8027916 ~ 8076547 (+) |
| tmem182a | LOC106581990 | coding | downstream | 176147 | 8182474 ~ 8189254 (+) |
| LOC110501318 | pou3f3 | coding | downstream | 248375 | 8254702 ~ 8258209 (+) |
| G1771658 | NA | non-coding | upstream | 45659 | 7921813 ~ 7947715 (+) |
| G1771660 | NA | non-coding | upstream | 101630 | 7891346 ~ 7891744 (+) |
| G1771651 | LOC106582025 | non-coding | upstream | 110320 | 7873683 ~ 7883054 (+) |
| G1771648 | NA | non-coding | upstream | 124822 | 7866073 ~ 7868552 (+) |
| G1771592 | NA | non-coding | upstream | 130116 | 7859886 ~ 7863258 (+) |
| G1771750 | NA | non-coding | downstream | 86872 | 8093199 ~ 8093423 (+) |
| G1771754 | NA | non-coding | downstream | 92996 | 8099323 ~ 8099767 (+) |
| G1771755 | NA | non-coding | downstream | 93474 | 8099801 ~ 8100018 (+) |
| G1772083 | NA | non-coding | downstream | 234242 | 8240569 ~ 8316560 (+) |
| LOC110501320 | LOC106581986 | non-coding | downstream | 259505 | 8265832 ~ 8283461 (+) |
| G1771580 | NA | other | upstream | 225866 | 7767065 ~ 7767508 (+) |
| LOC110501294 | LOC106582012 | other | upstream | 520883 | 7453053 ~ 7472601 (+) |
| G1771131 | LOC106581993 | other | upstream | 667354 | 7323635 ~ 7326020 (+) |
| G1770757 | NA | other | upstream | 710632 | 7234574 ~ 7282742 (+) |
| G1769469 | NA | other | upstream | 1931635 | 6061295 ~ 6061739 (+) |
| LOC110501322 | LOC106581983 | other | downstream | 351967 | 8358225 ~ 8410070 (+) |
| G1772554 | gpr161 | other | downstream | 1049378 | 9055705 ~ 9056402 (+) |
| G1772556 | LOC106567841 | other | downstream | 1099688 | 9106015 ~ 9122457 (+) |
| LOC110501352 | gpr34 | other | downstream | 1378033 | 9384301 ~ 9387652 (+) |
| G1775959 | NA | other | downstream | 3505638 | 11511965 ~ 11516413 (+) |
