LOC110501321 (fhl2)


Basic Information

Item Value
gene id LOC110501321
gene name fhl2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 8294881 ~ 8310469 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958618.1
TGAGAagtgtagaggagaggggtgtgCAGTGTCATGTGCTTGGGACACTGGGGACTTCCACGAGAGGCAGCCGGACACAAACCACTGGTCAGCAAAGCGAGACAGGCCAGGCACAGAGAGGCATAACCAGGAGTCTTATCAGGGGCTGAACTGCTAACAGCTGCAGAGCGTTAGCGGGGTGGGATTCCCGGTGCCAAGATGACGGAGCGCTATGATTGCCACTACTGTAAGGAATCCCTGTTTGGTAAGAAGTACGTCCTGAGAGAGGAGAACCCATACTGTGTCAAATGCTACGAGAGCCTGTACTCCAACACCTGTGAGGACTGCAAGAAACCCATTGGCTGCAACACCAGGGACCTGTCCTACAAGGACCGCCACTGGCACGAGGAGTGTTTCCAGTGCTTCCAGTGTAAACGCTCTCTGGTGGACAAGCCCTTCTCCACCAAGGATGACCAGCTGCTCTGCACTGAGTGCTACTCCAATGAGTACTCTTCCAAGTGCCACGAGTGCAAGAAGACCATCATGCCTGGCTCCAGGAAGATGGAGCATAAGGGTAACAGCTGGCATGAGACCTGCTTCACCTGCCAGCGTTGCCAGCAGCCCATCGGCACCAAGAGCTTCATCCCCAAGGAGAACCAAAACTTCTGTGTGCCCTGCTACGAGAAACAGTTTGCCATGCAGTGTGTGCATTGCAAGAAACCAATCACTACTGGTGGGGTGACCTATCGCGACCAGCCCTGGCATAAGGACTGCTTCCTGTGCACCGGCTGCAAGCAGCAGCTGTCAGGCCAGCGGTTCACCTCCCGTGATGACTTTGCATACTGCCTCAACTGTTTCTGCAACCTGTACGCTAAGAAGTGTGCCTCCTGCACCACCCCAATCAGTGgtCTGGGTGGAAGTAAGTACATCTCCTTTGAAGAGCGTCAGTGGCACCATGACTGCTTCAACTGTAGGAAGTGCTCCGTCTCCCTGGTGGGCCGGGGTTTCCTCACTGAGCGTGATGACATCCTGTGCCCTGAGTGTGGCAAAGACATCTGATTGGCAGGCAGCGAGTGGCCGACAAATCTGATTAGATAGCAATGAAACAACCAGGAGGAATGTtttaaaataatacatttgaaaaaatcaGCCAGGAACCGTAAAAATGAGTCCCAACAACAACCCGTCATAGCACaactggaaatatatatatatatatcacaataGCACAATATACTATCAGGCTACTAACCCAATATGCTCTTTGAGTTCTAAAATAGACATTTGTCAAACATAGGTTTTTGTGTCATTGGTCTTAGATTTGTTGGTGTGCAACAGCAAATATTGCTTTCTGTGAACCCTGGCTTGATATCCAATATCAGTTTGAGGTATTGCGCAAGAATATCTGCTGTCCTAATCTATTATATGCTGTTAAGATTCACATATTCTGAGTTTATGTATTTAGAAAGGAAAGTCCACCCAAATCACACAATTACTGCAGTCTATGGAAACAAATATGTAATTCTGTAATTTGGGTGGACTATCACTTTACGTTTTGAAAGGCTATTTTGTGGTGTGTATGAAGGAGAACACATTTCTAAGTAAATGAGCTCCAAAGTAAACTAACACAAAGGAACAGATTTTACCGGGCTTTTACACTGGTGCAAAGTTTAATGTTATTCAGATGGGAATAAAACATAAAAGCTACAACTAAAGAAAAATACTAAATGTTAATAACAGAAGTGTAAACATTGACAGTTTGATAAGCTCAATTTATCATGCCCAATAAATAGCAAGTATACATTTAAGGCTGGTGGAAATGCCTGGTAACACTGACTCTAAGTGCTTATAAACGTGAGAGACGACACAGCACTGTCTGTATAAGTAATTTTCCAAGGGCACCGATGAAAAGTCTGTATTTGAAATCCAAATAAAGAACTACTAAAAGACC
>XM_021578798.2
agtgagtgtgtgtgtatttatagcCCATTGAAAAAGAAAAGAGACCCCTGTCccctcctacccctctcctcacccACTCCCCAATTAGTCGTCTATTGGTGGGGTAATCCAATCAGGAGTGACTACAGCTCGCCCTCCGTCGCCCGTCTCAGTCTGAGCAGACTCCTCAAAGGCACACACCCTCCACAGACAGAAAGGTTAGCGGGGTGGGATTCCCGGTGCCAAGATGACGGAGCGCTATGATTGCCACTACTGTAAGGAATCCCTGTTTGGTAAGAAGTACGTCCTGAGAGAGGAGAACCCATACTGTGTCAAATGCTACGAGAGCCTGTACTCCAACACCTGTGAGGACTGCAAGAAACCCATTGGCTGCAACACCAGGGACCTGTCCTACAAGGACCGCCACTGGCACGAGGAGTGTTTCCAGTGCTTCCAGTGTAAACGCTCTCTGGTGGACAAGCCCTTCTCCACCAAGGATGACCAGCTGCTCTGCACTGAGTGCTACTCCAATGAGTACTCTTCCAAGTGCCACGAGTGCAAGAAGACCATCATGCCTGGCTCCAGGAAGATGGAGCATAAGGGTAACAGCTGGCATGAGACCTGCTTCACCTGCCAGCGTTGCCAGCAGCCCATCGGCACCAAGAGCTTCATCCCCAAGGAGAACCAAAACTTCTGTGTGCCCTGCTACGAGAAACAGTTTGCCATGCAGTGTGTGCATTGCAAGAAACCAATCACTACTGGTGGGGTGACCTATCGCGACCAGCCCTGGCATAAGGACTGCTTCCTGTGCACCGGCTGCAAGCAGCAGCTGTCAGGCCAGCGGTTCACCTCCCGTGATGACTTTGCATACTGCCTCAACTGTTTCTGCAACCTGTACGCTAAGAAGTGTGCCTCCTGCACCACCCCAATCAGTGgtCTGGGTGGAAGTAAGTACATCTCCTTTGAAGAGCGTCAGTGGCACCATGACTGCTTCAACTGTAGGAAGTGCTCCGTCTCCCTGGTGGGCCGGGGTTTCCTCACTGAGCGTGATGACATCCTGTGCCCTGAGTGTGGCAAAGACATCTGATTGGCAGGCAGCGAGTGGCCGACAAATCTGATTAGATAGCAATGAAACAACCAGGAGGAATGTtttaaaataatacatttgaaaaaatcaGCCAGGAACCGTAAAAATGAGTCCCAACAACAACCCGTCATAGCACaactggaaatatatatatatatatcacaataGCACAATATACTATCAGGCTACTAACCCAATATGCTCTTTGAGTTCTAAAATAGACATTTGTCAAACATAGGTTTTTGTGTCATTGGTCTTAGATTTGTTGGTGTGCAACAGCAAATATTGCTTTCTGTGAACCCTGGCTTGATATCCAATATCAGTTTGAGGTATTGCGCAAGAATATCTGCTGTCCTAATCTATTATATGCTGTTAAGATTCACATATTCTGAGTTTATGTATTTAGAAAGGAAAGTCCACCCAAATCACACAATTACTGCAGTCTATGGAAACAAATATGTAATTCTGTAATTTGGGTGGACTATCACTTTACGTTTTGAAAGGCTATTTTGTGGTGTGTATGAAGGAGAACACATTTCTAAGTAAATGAGCTCCAAAGTAAACTAACACAAAGGAACAGATTTTACCGGGCTTTTACACTGGTGCAAAGTTTAATGTTATTCAGATGGGAATAAAACATAAAAGCTACAACTAAAGAAAAATACTAAATGTTAATAACAGAAGTGTAAACATTGACAGTTTGATAAGCTCAATTTATCATGCCCAATAAATAGCAAGTATACATTTAAGGCTGGTGGAAATGCCTGGTAACACTGACTCTAAGTGCTTATAAACGTGAGAGACGACACAGCACTGTCTGTATAAGTAATTTTCCAAGGGCACCGATGAAAAGTCTGTATTTGAAATCCAAATAAAGAACTACTAAAAGACC

Function

symbol description
fhl2 Enables identical protein binding activity. Involved in several processes, including negative regulation of apoptotic process; negative regulation of calcineurin-NFAT signaling cascade; and negative regulation of transcription by RNA polymerase II. Located in focal adhesion.

NR:

description
PREDICTED: four and a half LIM domains protein 2 isoform X1

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K14380 FHL2; four and a half LIM domains protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958618.1 False 1930 mRNA 0.46 6 8294881 8303491
XM_021578798.2 True 1958 mRNA 0.45 6 8294881 8310469

Neighbor

gene id symbol gene type direction distance location
mfsd9 mfsd9 coding downstream 121003 8162076 ~ 8173878 (-)
inpp4aa LOC106586779 coding downstream 135366 8100745 ~ 8159515 (-)
si:dkey-4e7.3 LOC106582031 coding downstream 202015 8083817 ~ 8092866 (-)
mrpl30 mrpl30 coding downstream 298021 7992285 ~ 7996860 (-)
arhgef7a LOC106582025 coding downstream 389786 7791322 ~ 7905095 (-)
LOC110502043 LOC106581982 coding upstream 133138 8443607 ~ 8492893 (-)
LOC110501323 LOC106581977 coding upstream 314346 8624815 ~ 8684792 (-)
LOC110501325 LOC106581976 coding upstream 426706 8737175 ~ 8758540 (-)
LOC110502107 grk1 coding upstream 453555 8763292 ~ 8768047 (-)
LOC110501327 LOC106581971 coding upstream 459699 8770168 ~ 8783060 (-)
G1773604 NA non-coding downstream 128919 8164485 ~ 8165962 (-)
G1772031 NA non-coding downstream 134607 8159991 ~ 8160274 (-)
G1772025 NA non-coding downstream 141145 8152472 ~ 8153736 (-)
G1771999 NA non-coding downstream 201255 8093367 ~ 8093626 (-)
G1771995 NA non-coding downstream 212952 8081311 ~ 8081929 (-)
G1773693 NA non-coding upstream 13478 8323947 ~ 8328947 (-)
G1773708 NA non-coding upstream 51369 8361838 ~ 8413228 (-)
G1773716 NA non-coding upstream 65908 8376377 ~ 8378144 (-)
G1773710 NA non-coding upstream 98027 8408496 ~ 8458976 (-)
G1773773 NA non-coding upstream 169544 8480013 ~ 8482406 (-)
G1771426 LOC106582012 other downstream 830189 7462213 ~ 7464692 (-)
G1771092 NA other downstream 1038164 7251784 ~ 7256717 (-)
G1769618 NA other downstream 2334066 5960150 ~ 5960815 (-)
G1769281 NA other downstream 2469574 5800761 ~ 5825307 (-)
fgf14 fgf14 other downstream 4520872 3447431 ~ 3774567 (-)
gpr161a gpr161 other upstream 748507 9044945 ~ 9063520 (-)
G1774133 NA other upstream 791283 9101752 ~ 9123249 (-)

Expression


Co-expression Network