LOC110502045 (LOC106581954)



Basic Information


Item Value
gene id LOC110502045
gene name LOC106581954
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 9116497 ~ 9122873 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036958651.1
acctggcaccattcctacagtgaagcatggtgacaGCATAatgggtggaggcagcatcatgcaggGGCTTAGGCTGGGACTGCTGATTCTGCTGTGCTGCCTTGCACTGTTTCCAGCACCTGTCCAGGGGGACAAGGTCCTGGTGATGCCTGTAGACGGGAGCCACTGGCTGAGCATGAAGCTGCTGGTGAAGGAGCTGGCGGCCAGAAGCCATGAGATGGTTGTGCTGGTCCCTGACACATCCATCCTCATCCAGGGCTCTGACTACTACAGGACTGAGACCTTCAGGGTCCCCTACAGCAAGGCACAGCTGGACGAGAACGTCAACAAACTGAAGGACGCTGCATTCATCAAGGCCCCGGATGTAATGGACATATTCGTGAACGTGCAGCACCTGGTTCACTTCACCACCATGCAGGTGAAAGGCTGTGAGGGTCTGCTGTATGACGAGCCCCTGATGCAGCAACTGAGAGGAGAAATACTTCAGTTGATGCTGACTGACCCCTTTCTACCCTGTGGCTCCATCATCGCTGACTCCTTCAACAGCCCAGCGGTGTACTTCTTGAGGGGGATCCCCTGTGGGCTGGATGAGAAGGCTGCCCAGTGCCCCACTCCCCCCTCCTATGTACCACGCTTCCACTCAGGCAACACTGACCACATGGATTTCCTAGGGAGGGTTAAGAACATGCTCATGTACAGTCTGGAGAGCTACCTGTGTACGGTGATGTTTGCCAGCTTTGACGAGCTGACCAGCAGGTACCTGGAGAAGGACATGACGTACAGGGAACTTCTGGGTCACGGGGCGATCTGGCTGCTGAGGTATGACTACTCCTTTGAGTATCCCAAACCCAGGATGCCCAACATGGTCAACATTGGCGGCATCAACTGTGGTACAATAGCTCCACTTCCAGCGGACCTGCAGGAGTTTGTGGATGAGTCAGGAGAGGATGGCTTCGTGGTCTTCACCCTGGGCTCTATGATCTCTCAGATGCCTGAGGAGAAAGCCAAGCAGTTCTTTGATGCCTTCAGCAAGATCCCTCAGAGGGTGGTGTGGAGGTACACAGGAGTGGTGCCTGAGAACGCTCCAGACAACGTCAGATTGATGAAGTGGCTTCCTCAGAATGATCTGCTGGGCCACCCCAAGGTCAAGGCCTTCATCACCCATGGAGAAACCCACGGTATCTACGAGGGGATCTGTAACAGTGTTCCCATGGTGATGCTGCCGTTGTTCGTGACCAGAGTGACaactgtgacgaccctcccactctgtctgccgtattctgtctttgttcttgtttccttattaggatgcctgTGGACGGAgtcgggagggtcgtcagcttcatgggaaacacctgggccaggtgtctcccaggataaatagacctcttccacattcatggaagagactctctccatgcagacacttttatggattttgttgtgtttcttggtggtttttGGGTTGTTTGCTTTAGcatctttcaacaccctgcattatcacattcatgcatgcaaaacactcacttacactactgattactgattacacacaccattgtatattttccgttgctttagttaa

Function


NR:

description
UDP-glucuronosyltransferase-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036958651.1 True 1585 mRNA 0.53 4 9116497 9122873

Neighbor


gene id symbol gene type direction distance location
LOC118943577 LOC106581954 coding upstream 2309 9105504 ~ 9114188 (+)
LOC110501343 LOC106581954 coding upstream 12955 9094694 ~ 9103542 (+)
LOC110501341 dcaf6 coding upstream 74020 8968202 ~ 9042477 (+)
LOC110501340 LOC106581959 coding upstream 158866 8953576 ~ 8957631 (+)
LOC118943731 NA coding upstream 161746 8954570 ~ 8954751 (+)
prmt2 prmt2 coding downstream 4496 9127369 ~ 9137539 (+)
usp9 LOC106581949 coding downstream 87637 9210510 ~ 9288763 (+)
ddx3xa ddx3x coding downstream 172449 9295322 ~ 9316832 (+)
LOC110501352 gpr34 coding downstream 261428 9384301 ~ 9387652 (+)
LOC110501354 NA coding downstream 274659 9397532 ~ 9399287 (+)
G1772585 NA non-coding upstream 24987 9091148 ~ 9091510 (+)
G1772584 NA non-coding upstream 26173 9090051 ~ 9090324 (+)
G1772580 NA non-coding upstream 35469 9080826 ~ 9081028 (+)
G1772575 NA non-coding upstream 42874 9073335 ~ 9073623 (+)
G1772572 NA non-coding upstream 47599 9068560 ~ 9068898 (+)
G1772558 NA non-coding downstream 776 9123649 ~ 9126330 (+)
G1772598 NA non-coding downstream 34087 9156960 ~ 9160873 (+)
G1772626 LOC106586796 non-coding downstream 167446 9290319 ~ 9347754 (+)
G1772836 NA non-coding downstream 450416 9573289 ~ 9600929 (+)
G1772554 gpr161 other upstream 60095 9055705 ~ 9056402 (+)
LOC110501322 LOC106581983 other upstream 708792 8358225 ~ 8410070 (+)
G1771580 NA other upstream 1348989 7767065 ~ 7767508 (+)
LOC110501294 LOC106582012 other upstream 1644006 7453053 ~ 7472601 (+)
G1771131 LOC106581993 other upstream 1790477 7323635 ~ 7326020 (+)
G1775959 NA other downstream 2389092 11511965 ~ 11516413 (+)
G1775962 LOC100286503 other downstream 2397850 11520723 ~ 11522390 (+)
LOC110501387 LOC106581925 other downstream 2729598 11852404 ~ 11863661 (+)
G1776230 NA other downstream 2908408 12031281 ~ 12032340 (+)

Expression


LOC110502045(LOC106581954) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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LOC110502045(LOC106581954) Expression in each Bioproject

Bar chart with 19 bars.
LOC110502045(LOC106581954) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network