Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110501389 |
| gene name | LOC106581923 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 11920770 ~ 11934545 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| NGFI-A-binding protein 1-like |
| id | description |
|---|---|
| K22388 | NAB; NGFI-A-binding protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021578924.2 | True | 2040 | mRNA | 0.58 | 8 | 11920770 | 11934545 |
11,910,000
11,912,000
11,914,000
11,916,000
11,918,000
11,920,000
11,922,000
11,924,000
11,926,000
11,928,000
11,930,000
11,932,000
11,934,000
11,936,000
11,938,000
11,940,000
NC_048586.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501387 | LOC106581925 | coding | upstream | 57109 | 11852404 ~ 11863661 (+) |
| zgc:103759 | LOC106581882 | coding | upstream | 85429 | 11829466 ~ 11835341 (+) |
| LOC110502108 | igfbp-2b2 | coding | upstream | 901698 | 10997396 ~ 11019072 (+) |
| slc4a3 | LOC106581928 | coding | upstream | 943489 | 10874131 ~ 10977284 (+) |
| LOC110501378 | LOC106581930 | coding | upstream | 1146366 | 10633629 ~ 10774404 (+) |
| LOC110501391 | gpm6b | coding | downstream | 25845 | 11960390 ~ 12013580 (+) |
| LOC110501392 | trappc2 | coding | downstream | 90931 | 12025476 ~ 12030798 (+) |
| LOC118943633 | NA | coding | downstream | 184036 | 12118581 ~ 12121181 (+) |
| LOC110501399 | LOC106581914 | coding | downstream | 276439 | 12202156 ~ 12270054 (+) |
| LOC110501400 | LOC106581913 | coding | downstream | 354133 | 12288678 ~ 12347640 (+) |
| G1776222 | NA | non-coding | upstream | 35027 | 11885537 ~ 11885743 (+) |
| G1776146 | NA | non-coding | upstream | 143967 | 11776521 ~ 11776803 (+) |
| G1776113 | NA | non-coding | upstream | 178442 | 11741850 ~ 11742328 (+) |
| G1776078 | NA | non-coding | upstream | 222276 | 11697956 ~ 11698494 (+) |
| G1776076 | NA | non-coding | upstream | 226324 | 11694217 ~ 11694446 (+) |
| G1776158 | NA | non-coding | downstream | 203 | 11934748 ~ 11935846 (+) |
| G1776156 | NA | non-coding | downstream | 1437 | 11935982 ~ 11937536 (+) |
| G1776265 | NA | non-coding | downstream | 6879 | 11941424 ~ 11941677 (+) |
| G1776277 | NA | non-coding | downstream | 22627 | 11957172 ~ 11957394 (+) |
| G1776279 | NA | non-coding | downstream | 25463 | 11960008 ~ 11960268 (+) |
| G1775962 | LOC100286503 | other | upstream | 398380 | 11520723 ~ 11522390 (+) |
| G1775959 | NA | other | upstream | 404357 | 11511965 ~ 11516413 (+) |
| LOC110501352 | gpr34 | other | upstream | 2534937 | 9384301 ~ 9387652 (+) |
| G1772556 | LOC106567841 | other | upstream | 2798313 | 9106015 ~ 9122457 (+) |
| G1776230 | NA | other | downstream | 96736 | 12031281 ~ 12032340 (+) |
| G1776709 | NA | other | downstream | 812129 | 12690062 ~ 12761001 (+) |
| LOC110501417 | LOC106581898 | other | downstream | 827392 | 12756352 ~ 12787590 (+) |
| G1779170 | NA | other | downstream | 2144952 | 14079497 ~ 14079739 (+) |
