ifngr2b (LOC106581880)


Basic Information

Item Value
gene id ifngr2b
gene name LOC106581880
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 12830038 ~ 12836513 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578978.2
AGGGTTTAATGGATGAACCTGGAAACTCCCAATGCTGCCAAACtattttgggggggatttttCAGGCTTTGTGGGCGGGTTTTCCGGGGTTATTGGCCTAGCCCTAGAGTTTCCCTGGACTTGGCAACACCGCTTCCCGGTCGTAGCTGTGTTGAAGTGACGTGAACATAGTTTTTCTCAATTGCACGTAGGTTTCGCTATAATGCTAGTCACAATGTAGTGATGTATAAGGTTATGTTGCCGTCGCATATAGCTCACTGATCGAGTAAaatgtgtgtgaaatgtgttttgtcGTTTTGGGCACTCTGTCAAGTCATCAAACAAGcccaccCAGCTGATTCCTGCAGCCCTGTAGTCCAGATCAAACCCCAGGCAGGATTCCTGATGGTTAACATTGTGAAAAACTGTCTTTGGGAGGAACATGGGGACCATTGTCATTACGTGGTCAACTacggtagagagggggagaagctCAAAGAGTATGTCTCCAAATCCCCTGAGACCCTCCGAGGTCTGGAGATTGGGGGGAGGTACTGTGTACAGGTCCGCTATGTCTGTTACCACAACCCCTTTGGAACCTCTAGCCCCCTACAGTGTGTATCCATCCCAGAGTCAGAAAGGACAAGGCATATTAGGATTGTGGCTATCAGTGTGACCCTTACCATCCTGTTGGGATTCTTGGTAGTGGGCCTTGCGTTCATCTACAGGCACCATGAGAAAATTAAACAGTTCCTTCAACCCCCACTACAGCTACCAGACCACTATCGTGAGTACCTATCAGGGGACTTCCCCCAGCAGGCCCTGTCCATCACAAGAACAACCAGGGCCTGTGAAGAAAGCCACGATCTCATCTCCATCGCCTGCTGTGAAGAGGACCAGTCTGACAGAGAACAGGACTAATTCACCTACTGAACTGGAGTCATCCTCTGGCCCTTTAGATCATTACCCGTGATCCATTGATCCTGTGACTTCAGACAAGACATGAGCCTTTCACACTCACTGGGATTTTAAGATGAACTTGATAGCGTCAGTAAGTGAACTGTAGTAGGCCTATGACTGTTTACACTCTGAAGCCCTTGCTTGCATCAGCTACAAACATTGCGTTTGATCAAAAGATAACTATTTTACAAGAATCTGGGAACTTCTCTAGGCATGTTAGTatgctctgctgcagaggacagaGACAAGTGCATATGGCTCGCTAATTAGACCTACCCAGTAATGATTCATTTGATAATAACGTGTCATCAGGTCATCCAGCTTAAGACAGAACCACTTTATTAAAAAGTAATTTGACATGCGTCCTTGGGCCAGGACTTTCATGTAACATTTTGGCTGTTTAGTAATGGGATTACTATGTTCAACTGTGTATATCACACTATTTCTTCAGTTTTTTTTACTGAACATATTAGACAAGTACTAGTAGCAAGGTTAAGGCACATATTGTAATTTACTAATCAATTAAATTACAGTTTGAGGTATACATGGTCAAAAGTTGGCTGAGGGGCTGTATTAAAATGTGAAAACAGACATAGGACAAGTTCTTGAGATTTATCTATGCTTGCACTTTATATGAAAATTTACCTCTAGCAATATATTGATTGAATGTATTAACTTTTTTGTTGTGTTACGTTATGCTAAAACTGTTCAAGTCAAGGTGAAattggaaaagtgtgtgtgttacattgacTTTTGTTTTTGACTCTAAAAATGAATATTCTACATTGATGTGAAAGTGCCAGGGCTTTGACCCACAAATTATTTGATACAGGGTTTAAATAAATGAACACAGCCATTTTGA
>TU2035745
CGGTCGTAGCTGTGTTGAAGTGACGTGAACATAGTTTTTCTCAATTGCACGTAGGTTTCGCTATAATGCTAGTCACAATGTAGTGATGTATAAGGTTATGTTGCCGTCGCATATAGCTCACTGATCGAGTAAaatgtgtgtgaaatgtgttttgtcGTTTTGGGCACTCTGTCAAGTCATCAAACAAGGAGTATGTCTCCAAATCCCCTGAGACCCTCCGAGGTCTGGAGATTGGGGGGAGGTACTGTGTACAGGTCCGCTATGTCTGTTACCACAACCCCTTTGGAACCTCTAGCCCCCTACAGTGTGTATCCATCCCAGAGTCAGAAAGGACAAGGCATATTAGGATTGTGGCTATCAGTGTGACCCTTACCATCCTGTTGGGATTCTTGGTAGTGGGCCTTGCGTTCATCTACAGGCACCATGAGAAAATTAAACAGTTCCTTCAACCCCCACTACAGCTACCAGACCACTATCGTGAGTACCTATCAGGGGACTTCCCCCAGCAGGCCCTGTCCATCACAAGAACAACCAGGGCCTGTGAAGAAAGCCACGATCTCATCTCCATCGCCTGCTGTGAAGAGGACCAGTCTGACAGAGAACAGGACTAATTCACCTACTGAACTGGAGTCATCCTCTGGCCCTTTAGATCATTACCCGTGATCCATTGATCCTGTGACTTCAGACAAGACATGAGCCTTTCACACTCACTGGGATTTTAAGATGAACTTGATAGCGTCAGTAAGTGAACTGTAGTAGGCCTATGACTGTTTACACTCTGAAGCCCTTGCTTGCATCAGCTACAAACATTGCGTTTGATCAAAAGATAACTATTTTACAAGAATCTGGGAACTTCTCTAGGCATGTTAGTatgctctgctgcagaggacagaGACAAGTGCATATGGCTCGCTAATTAGACCTACCCAGTAATGATTCATTTGATAATAACGTGTCATCAGGTCATCCAGCTTAAGACAGAACCACTTTATTAAAAAGTAATTTGACATGCGTCCTTGGGCCAGGACTTTCATGTAACATTTTGGCTGTTTAGTAATGGGATTACTATGTTCAACTGTGTATATCACACTATTTCTTCAGTTTTTTTTACTGAACATATTAGACAAGTACTAGTAGCAAGGTTAAGGCACATATTGTAATTTACTAATCAATTAAATTACAGTTTGAGGTATACATGGTCAAAAGTTGGCTGAGGGGCTGTATTAAAATGTGAAAACAGACATAGGACAAGTTCTTGAGATTTATCTATGCTTGCACTTTATATGAAAATTTACCTCTAGCAATATATTGATTGAATGTATTAACTTTTTTGTTGTGTTACGTTATGCTAAAACTGTTCAAGTCAAGGTGAAattggaaaagtgtgtgtgttacattgacTTTTGTTTTTGACTCTAAAAATGAATATTCTACATTGATGTGAAAGTGCCAGGGCTTTGACCCACAAATTATTTGATACAGG

Function

NR:

description
uncharacterized protein LOC110501419

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578978.2 False 1801 mRNA 0.43 5 12830038 12836513
TU2035745 True 1483 lncRNA 0.41 4 12830067 12836376

Neighbor

gene id symbol gene type direction distance location
LOC110501418 NA coding downstream 17588 12806707 ~ 12812450 (-)
LOC110501413 LOC106581899 coding downstream 113386 12684208 ~ 12716652 (-)
LOC110501414 LOC106581900 coding downstream 146063 12648341 ~ 12683975 (-)
LOC110501412 LOC106581902 coding downstream 194001 12627375 ~ 12636037 (-)
LOC110501411 LOC106581904 coding downstream 205178 12620582 ~ 12624860 (-)
LOC110501422 LOC106581896 coding upstream 19117 12855630 ~ 12867235 (-)
crfb5 LOC106581895 coding upstream 32006 12868519 ~ 12887935 (-)
LOC110501423 LOC106581741 coding upstream 65462 12901975 ~ 12912654 (-)
LOC110501424 i20ra coding upstream 76248 12912761 ~ 12919173 (-)
LOC110502048 NA coding upstream 91689 12928202 ~ 12935504 (-)
G1777785 NA non-coding downstream 161 12827037 ~ 12829877 (-)
G1777781 NA non-coding downstream 41421 12788130 ~ 12788617 (-)
G1777743 NA non-coding downstream 68951 12753586 ~ 12761087 (-)
G1777741 NA non-coding downstream 69377 12752532 ~ 12760661 (-)
G1777848 NA non-coding upstream 82709 12919222 ~ 12919556 (-)
G1777853 NA non-coding upstream 90593 12927106 ~ 12927330 (-)
G1777861 NA non-coding upstream 96352 12932865 ~ 12933125 (-)
G1777883 NA non-coding upstream 151546 12988059 ~ 12988548 (-)
G1777441 LOC106581914 other downstream 559924 12268217 ~ 12270114 (-)
G1777286 NA other downstream 788416 12041108 ~ 12041622 (-)
G1777196 LOC100136012 other downstream 986979 11841073 ~ 11843059 (-)
fundc1 fundc1 other downstream 3092182 9635535 ~ 9737896 (-)
G1778140 efnb2 other upstream 332267 13168780 ~ 13172979 (-)
G1778224 NA other upstream 442767 13279280 ~ 13330495 (-)
G1781137 lrp2 other upstream 2730990 15567503 ~ 15568534 (-)
b3galt1b LOC106581793 other upstream 2849343 15684423 ~ 15825221 (-)
LOC110501514 dapl1 other upstream 4220609 17057104 ~ 17063550 (-)

Expression


Co-expression Network