LOC110501423 (LOC106581741)


Basic Information

Item Value
gene id LOC110501423
gene name LOC106581741
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 12901975 ~ 12912654 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578983.2
CTTACGCAGCGTAGTTACGCTTACCTCGCAATTCTCAGACCATTCAGAAAGTTGGCTAGACAAACTCAAGAGCAGCCGCAAGAAAAATATAGCCAACAAAACATTTCAGTGTCGTTGGATTACATTGAAAATCTCTTGGATAACATGCAATCTACAGTTTTTACCATCTTGTTTGTCAAAGTATGTTTAACTTTACATGGAATTACAGCAGTGTTAGCCGAACTTCCAAGTCCCAGTAACATCAGGATTAACTCTGTCAACATGGGACTAGTGTTGGAGTGGGATGCACCTCAGAACCACACAGAAAACATAACCTACAGAGCAGAGTACAGGGGCTTAGTCGGACGCAATGAGGTTGTATGTTGGAACACAACAGCCCAAAGCTGTGACTTCACCAGTCATCTAAACAAATTTGGAGTGTACACTTTCCAAGTGAGGGCAGAACGAGAGGGGGACACATCTCGCTGGATGAAGACTAAGAAGTTTGTCATGGATGAACACACCACGCTAGGCCCTCCCGGTGTGGCGCTCGTCTCCAGTGGTGCTGTCATTGAAGTGAGCATCAACGACCCAGTGCTCAAGATCTCTGAGTTCAAAGACTTATACAACAACGCACACTTTAATATCACCTACTGGAAAGAGGGTCAggaggagaagGACAAAAGTATGAAATGCACCCCACTTCGTAAAGTGGTCTTGGCACTGGAGCCATGGACCAGGTACTGTGTTCAGGTCTGGGTGTACACCCAGAGGTTCTCCAAACACAGCCAGCCCAGCAATGTTACATGTGAGAGCACCGCTAAGGGCAATGACAGGCCTTGGGTGGTAGCCCTGGTGACGTTTGTGGTGATGGCTGTGGCAGTGGCCCTGCTGGCCCTGGCCTTCTGGTACTGCTACAGGGTGGTCCGCTTCCTCAGACCCAAGGCCAAGCTGCCTGAACATTTCACAGAGTAGCTGTTGGATTCACCATGCTCCTCCATCCTGGCCATACAGAGCAGCCTCCAGCCTGAGGAGGTGTACCATGAGCTCCGCGTCATGCCAGGTGGGGcatagacaaaggagagctctatCTGTTGGTCGGAAGAACGTAATACACACAgactgggagaaaacacacagacCGTCTGGCTGTGTTCGAGAGTATCAAAACTGTGGATTGAGACTGACTGACAGATCTACAAATAATATTGAAAAGTTATTTACGTTGCAAGGTGATTTGTTGATCAGTCATTCTCGACTCGCCTTTAAAGTCGGCTGCAATGTCGAACACGCCCAAAGTGGGTGGGGAAGATATGGGTCAAAAATAGGAACTGAGTAGTCCCAGGTGAAGTAAGAAAAGAGAACAAGGACTGAAATAGATGGCAGAAAAGAGGACGTGTATCTTATTGAGAATTGAGAAATAATATTCTGACATCTGGGATTTAGTGATTTTTATTAATGTTGATGAAATGCTAAGAGAGCTACTTACTGTGATGTGTTTATTTATGTGACCTTTAAGTGTATGATAATGATCAATATTGCCTATCATTCATTACGGCCATGCATGGTAAGCCTACACTGGCATTTTTTGGGGAATCATGGCTATAGGGCAACGGAATGGTTCAACCACTGTCATCAGAGAGACTTACAACACAGTCCAAATGGCACAACACCAGGAAGGGAGTATTACATGGTCTGTGTTTATGCCTTGATGCACTCTGTGTTTGTTCCTATGTGACTCTGTGTTTGTtcctatgtgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactctgtgtttgttcctatatgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactcTGTGTTTGTTCCTATATGTTTCTGTGTGACTCTGTGTTTGTtcctatgtgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactcTGTGTTTGTTCCTATATGtttctgtgtgactgtgtttgtgCCTAATATGTCTCTGTGTGACTCTGTGTTTGTgcctatatgtctctgtgtgacTCTGTGCTTGTtcctatatgtctctgtgtgacTCTGTGTTTGTGAAGGATATTAAAGgaccaatgcagccatttttatctaaatatcaaatcatttatAAGTAACAATGAAAACAATCAGAGTAAGGTACTTTTTTAGCAAATAGCAACTTCTTAATCAAGAcatttgctaggactgtctgggagtgctTTAGGCAAAAACAGAAAATgaactgttattggcagagaggtttggaactctttcttattggtctattaactaatttaccacatggtgatgttaccatggaaggccaaaactccatcctacGTAAAAAGGCTGAAATTTCAgatggtcttttcaaacagctcttatacttaaaggacattatcataattttcataatttcaGTATTATTCCAAGCTCATAGTGTGGAAATTTAAAACACAGGTAactcacgtttttgactgcattgGCCCTTTAACAGTTGAAGGTACTCTATTAGCACTTGGAAGATGTCGTTTGACATTTGAAGTCATGTTTTATAGACTTTTTACCATTTTATATTGtgggagaccacacacacaaacaagtaaAAAATGTGCCCAACAGTTAAAAATGACTTGCCAAgggaataaatatatatttttaaatgctcATAAATGTTTGGTGTTGTCACCTATC
>XM_021578982.2
TCTTACGCAGCGTAGTTACGCTTACCTCGCAATTCTCAGACCATTCAGAAAGTTGGCTAGACAAACTCAAGAGCAGCCGCAAGAAAAATATAGCCAACAAAACATTTCAGTGTCGTTGGATTACATTGAAAATCTCTTGGATAACATGCAATCTACAGTTTTTACCATCTTGTTTGTCAAAGTATGTTTAACTTTACATGGAATTACAGCAGTGTTAGCCGAACTTCCAAGTCCCAGTAACATCAGGATTAACTCTGTCAACATGGGACTAGTGTTGGAGTGGGATGCACCTCAGAACCACACAGAAAACATAACCTACAGAGCAGAGTACAGGGGCTTAGTCGGACGCAATGAGGTTGTATGTTGGAACACAACAGCCCAAAGCTGTGACTTCACCAGTCATCTAAACAAATTTGGAGTGTACACTTTCCAAGTGAGGGCAGAACGAGAGGGGGACACATCTCGCTGGATGAAGACTAAGAAGTTTGTCATGGATGAACACACCACGCTAGGCCCTCCCGGTGTGGCGCTCGTCTCCAGTGGTGCTGTCATTGAAGTGAGCATCAACGACCCAGTGCTCAAGATCTCTGAGTTCAAAGACTTATACAACAACGCACACTTTAATATCACCTACTGGAAAGAGGGTCAggaggagaagGACAAAAGTATGAAATGCACCCCACTTCGTAAAGTGGTCTTGGCACTGGAGCCATGGACCAGGTACTGTGTTCAGGTCTGGGTGTACACCCAGAGGTTCTCCAAACACAGCCAGCCCAGCAATGTTACATGTGAGAGCACCGCTAAGGGCAATGACAGGCCTTGGGTGGTAGCCCTGGTGACGTTTGTGGTGATGGCTGTGGCAGTGGCCCTGCTGGCCCTGGCCTTCTGGTACTGCTACAGGGTGGTCCGCTTCCTCAGACCCAAGGCCAAGCTGCCTGAACATTTCACAGAGCTGTTGGATTCACCATGCTCCTCCATCCTGGCCATACAGAGCAGCCTCCAGCCTGAGGAGGTGTACCATGAGCTCCGCGTCATGCCAGGTGGGGcatagacaaaggagagctctatCTGTTGGTCGGAAGAACGTAATACACACAgactgggagaaaacacacagacCGTCTGGCTGTGTTCGAGAGTATCAAAACTGTGGATTGAGACTGACTGACAGATCTACAAATAATATTGAAAAGTTATTTACGTTGCAAGGTGATTTGTTGATCAGTCATTCTCGACTCGCCTTTAAAGTCGGCTGCAATGTCGAACACGCCCAAAGTGGGTGGGGAAGATATGGGTCAAAAATAGGAACTGAGTAGTCCCAGGTGAAGTAAGAAAAGAGAACAAGGACTGAAATAGATGGCAGAAAAGAGGACGTGTATCTTATTGAGAATTGAGAAATAATATTCTGACATCTGGGATTTAGTGATTTTTATTAATGTTGATGAAATGCTAAGAGAGCTACTTACTGTGATGTGTTTATTTATGTGACCTTTAAGTGTATGATAATGATCAATATTGCCTATCATTCATTACGGCCATGCATGGTAAGCCTACACTGGCATTTTTTGGGGAATCATGGCTATAGGGCAACGGAATGGTTCAACCACTGTCATCAGAGAGACTTACAACACAGTCCAAATGGCACAACACCAGGAAGGGAGTATTACATGGTCTGTGTTTATGCCTTGATGCACTCTGTGTTTGTTCCTATGTGACTCTGTGTTTGTtcctatgtgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactctgtgtttgttcctatatgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactcTGTGTTTGTTCCTATATGTTTCTGTGTGACTCTGTGTTTGTtcctatgtgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactctgtgtttgttcctatgtgtctctgtgtgactcTGTGTTTGTTCCTATATGtttctgtgtgactgtgtttgtgCCTAATATGTCTCTGTGTGACTCTGTGTTTGTgcctatatgtctctgtgtgacTCTGTGCTTGTtcctatatgtctctgtgtgacTCTGTGTTTGTGAAGGATATTAAAGgaccaatgcagccatttttatctaaatatcaaatcatttatAAGTAACAATGAAAACAATCAGAGTAAGGTACTTTTTTAGCAAATAGCAACTTCTTAATCAAGAcatttgctaggactgtctgggagtgctTTAGGCAAAAACAGAAAATgaactgttattggcagagaggtttggaactctttcttattggtctattaactaatttaccacatggtgatgttaccatggaaggccaaaactccatcctacGTAAAAAGGCTGAAATTTCAgatggtcttttcaaacagctcttatacttaaaggacattatcataattttcataatttcaGTATTATTCCAAGCTCATAGTGTGGAAATTTAAAACACAGGTAactcacgtttttgactgcattgGCCCTTTAACAGTTGAAGGTACTCTATTAGCACTTGGAAGATGTCGTTTGACATTTGAAGTCATGTTTTATAGACTTTTTACCATTTTATATTGtgggagaccacacacacaaacaagtaaAAAATGTGCCCAACAGTTAAAAATGACTTGCCAAgggaataaatatatatttttaaatgctcATAAATGTTTGGTGTTGTCACCTATC

Function

NR:

description
interleukin-10 receptor subunit beta-like isoform X1

GO: NA

KEGG:

id description
K05135 IL10RB, CD210B; interleukin 10 receptor beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578983.2 False 2764 mRNA 0.43 7 12901975 12912653
XM_021578982.2 True 2762 mRNA 0.43 7 12901975 12912654

Neighbor

gene id symbol gene type direction distance location
crfb5 LOC106581895 coding downstream 14040 12868519 ~ 12887935 (-)
LOC110501422 LOC106581896 coding downstream 34740 12855630 ~ 12867235 (-)
ifngr2b LOC106581880 coding downstream 65462 12830038 ~ 12836513 (-)
LOC110501418 NA coding downstream 89525 12806707 ~ 12812450 (-)
LOC110501413 LOC106581899 coding downstream 185323 12684208 ~ 12716652 (-)
LOC110501424 i20ra coding upstream 107 12912761 ~ 12919173 (-)
LOC110502048 NA coding upstream 15548 12928202 ~ 12935504 (-)
LOC110501425 LOC106581740 coding upstream 29897 12942551 ~ 12952097 (-)
LOC110501426 LOC106581739 coding upstream 50735 12963389 ~ 12975845 (-)
LOC110502113 NA coding upstream 925810 13838464 ~ 13843329 (-)
G1777785 NA non-coding downstream 72098 12827037 ~ 12829877 (-)
G1777781 NA non-coding downstream 113358 12788130 ~ 12788617 (-)
G1777742 NA non-coding downstream 147545 12753768 ~ 12754430 (-)
G1777848 NA non-coding upstream 6568 12919222 ~ 12919556 (-)
G1777853 NA non-coding upstream 14452 12927106 ~ 12927330 (-)
G1777861 NA non-coding upstream 20211 12932865 ~ 12933125 (-)
G1777883 NA non-coding upstream 75405 12988059 ~ 12988548 (-)
LOC110501411 LOC106581904 other downstream 277281 12620582 ~ 12624860 (-)
G1777441 LOC106581914 other downstream 631861 12268217 ~ 12270114 (-)
G1777286 NA other downstream 860353 12041108 ~ 12041622 (-)
G1777196 LOC100136012 other downstream 1058916 11841073 ~ 11843059 (-)
fundc1 fundc1 other downstream 3164119 9635535 ~ 9737896 (-)
G1778140 efnb2 other upstream 256126 13168780 ~ 13172979 (-)
G1778224 NA other upstream 366626 13279280 ~ 13330495 (-)
G1781137 lrp2 other upstream 2654849 15567503 ~ 15568534 (-)
b3galt1b LOC106581793 other upstream 2773202 15684423 ~ 15825221 (-)
LOC110501514 dapl1 other upstream 4144468 17057104 ~ 17063550 (-)

Expression


Co-expression Network