poglut2 (kdelc1)


Basic Information

Item Value
gene id poglut2
gene name kdelc1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 14132159 ~ 14156711 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958783.1
GGCCCAATGGCTTTTCCATACTCCTTTGGTCCAATCAGCTTCCCGTTCTACCAGACGTTGTGGGGGCGACCAATCAGATTGCCAGGCTCGCCTGTCTGCGAATAACTTCTACCCAAACCGGCCAGGATTTTGTGTCCATGTATGTTTTATTATAAACTTTACCGATAAAAAATGTGACACAGCAAACTAATAGAAATGCGCCGTGTTGTGTATATGTGAGTATAGTATACACAAATCGAAACATTGCATCCGCATATTTGCCAGAAAGGGTGTTTCGCTGGATGTAGGCTATACACTGCTGGCGGCCAGATGTCGAATTATCCGGCGTTTCCTACATTTTACCGGGATGGTCATTTTTACAGGCTTGAAATTCCATTGTAAAATAGCAGTTTGGAAGAGACAAGGGACCAAAGCATTTTCAGAAGAACCGAGTCACAGAAACATGTTGCGTAAATTGCTTTCGTTATTTGTGTTGTGCTGTCTGGGGCTGTTGGAACATACACCTCCCGTGGCTTCAACCGGCGCGGTGCCCAGTGCTACAAGAACTTTGGTATGGGGTTCTGGACTCGAAGCAAATATTGTCCTTCCAGCTCGTTTCTTTTACATACAGACTGTGGACAGCTCGGGGAGAAATTTCACATCATCTCCCGGGGAGAACACATTCGAGGTGAAGATCGTGTCCCCAGTGGAACAGTTCACTAGAATCTGGGTGCAGGTTCTAGATCGCAGAGATGGTTCCTTTCTGGTGCGGTACAGGATGTATGCCAGCTACACAGACCTACACGTCCACATACTGCTCAACGACAAGCATGTTGCGAAGTCCCCATTCATTCTGAAAGGTCCAGTGTACCATGATGGTTGTGACTGTCCTCAGCCCAGTGGTTCTGTGTGGAAGAAGGACATGCAGTGCCCTGTGTCCTTCCCTCAGATAGAGCAGGACCTGGCCCTGTTCCCCAGGGTGGACCCAGACCGCAACGCCCTGGAGGTGCCCCAGCGTTTCGGACAGAGACAGAGCCTCTGCCACTACACAATCAAAGACAACAAGGTCTACATTAAGACACTAGGGGAGCATGTGGGATTCAGGATCTTCATGGATGCCTTCCTCCTCTCGCTAACCAGGAAGGTGCGGGTCCCAGATCTAGAGTTCTTTGTGAACCTGGGGGACTGGCCCCTGGAGAAGAGGAGGCCCTCAGAGAGGCTCCACCCCATCTTCTCCTGGTGCGGCTCCAATGACACCCGCGACGTTGTTATGCCAACCTACGACCTCACCGAGTCGGTCCTGGAGACCATGGGAAGAGTGAGTCTGGACATGATGTCGGTCCAGGCCAATACGGGGCCTCCGTGGCGGGAGAAGAACGCCACAGCGTTCTGGAGGGGGCGGGACAGTCGCAAGGAGCGCCTGGAGCTGGTGAAGCTGGCCAGGGCTCATCCCGACATGGTGGATGCAGCCTTTACCAACTTCTTCTTCTTCAAACACGATGAGAGCCTCTACGGACCGCTGGTCAAACACGTCTCCTTCTTTGACTTCTTCAAGTACAAGTACCAGATCAACATAGATGGCACTGTGGCAGCCTACAGACTGCCCTACCTGCTGGCTGGGGACAGTGTGGTGCTGAAGCAGGACTCTGGTTACTATGAACACTTCTACAGCCAGCTCAGACCCTGGGAACACTACATCCCCATCAGAGCAGACCTGGCTGACCTGCAGGAGAAGATCCATTGGGCCCGTGAGCAAGATGAGGAGGCAAGAAAAATCGCAGTAGCCGGTCAACAATTTGCCCGAAATCATCTAATGGGCGACAGTATATTCTGCTACTACTACAAACTCTTCCAGGAGTATGCCAAGTTGCAGGTGACTGAGCCTAAGGTCAGAGAGGGCATGGAACAGGTCGAGCAGCCCAATGATGACCTCTTCCCATGCTCCTGCCACCGGACACCACAGGTCAAGGATGAATTATGATTTGTCCACTGTTCAATTATAAAACAATCGCATTTTTATCGGATGTTCCTGTGctgtaaaatgtttgtttttttttgggggggggggcaaaatgtGAATTGTGGGCTTGTCAGTCACCCTAACCATACATGATTGTTAGTTTCCACATGTTTATAATAAATATTTTTTCATTGTATGCA
>XM_036958784.1
TACGTGTGGCCCAATGGCTTTTCCATACTCCTTTGGTCCAATCAGCTTCCCGTTCTACCAGACGTTGTGGGGGCGACCAATCAGATTGCCAGGCTCGCCTGTCTGCGAATAACTTCTACCCAAACCGGCCAGGATTTTGTGTCCATGTATGTTTTATTATAAACTTTACCGATAAAAAATGTGACACAGCAAACTAATAGAAATGCGCCGTGTTGTGTATATGTGAGTATAGTATACACAAATCGAAACATTGCATCCGCATATTTGCCAGAAAGGGTGTTTCGCTGGATGTAGGCTATACACTGCTGGCGGCCAGATGTCGAATTATCCGGCGTTTCCTACATTTTACCGGGATGGTCATTTTTACAGGCTTGAAATTCCATTGTAAAATAGCAGTTTGGAAGAGACAAGGGACCAAAGCATTTTCAGAAGAACCGAGTCACAGAAACATGTTGCGTAAATTGCTTTCGTTATTTGTGTTGTGCTGTCTGGGGCTGTTGGAACATACACCTCCCGTGGCTTCAACCGGCGCGGTGCCCAGTGCTACAAGAACTTTGGTATGGGGTTCTGGACTCGAAGCAAATATTGTCCTTCCAGCTCGTTTCTTTTACATACAGACTGTGGACAGCTCGGGGAGAAATTTCACATCATCTCCCGGGGAGAACACATTCGAGGTGAAGATCGTGTCCCCAGTGGAACAGTTCACTAGAATCTGGGTGCAGGTTCTAGATCGCAGAGATGGTTCCTTTCTGGTGCGGTACAGGATGTATGCCAGCTACACAGACCTACACGTCCACATACTGCTCAACGACAAGCATGTTGCGAAGTCCCCATTCATTCTGAAAGGTCCAGTGTACCATGATGGTTGTGACTGTCCTCAGCCCAGTGGTTCTGTGTGGAAGAAGGACATGCAGTGCCCTGTGTCCTTCCCTCAGATAGAGCAGGACCTGGCCCTGTTCCCCAGGGTGGACCCAGACCGCAACGCCCTGGAGGTGCCCCAGCGTTTCGGACAGAGACAGAGCCTCTGCCACTACACAATCAAAGACAACAAGGTGCGGGTCCCAGATCTAGAGTTCTTTGTGAACCTGGGGGACTGGCCCCTGGAGAAGAGGAGGCCCTCAGAGAGGCTCCACCCCATCTTCTCCTGGTGCGGCTCCAATGACACCCGCGACGTTGTTATGCCAACCTACGACCTCACCGAGTCGGTCCTGGAGACCATGGGAAGAGTGAGTCTGGACATGATGTCGGTCCAGGCCAATACGGGGCCTCCGTGGCGGGAGAAGAACGCCACAGCGTTCTGGAGGGGGCGGGACAGTCGCAAGGAGCGCCTGGAGCTGGTGAAGCTGGCCAGGGCTCATCCCGACATGGTGGATGCAGCCTTTACCAACTTCTTCTTCTTCAAACACGATGAGAGCCTCTACGGACCGCTGGTCAAACACGTCTCCTTCTTTGACTTCTTCAAGTACAAGTACCAGATCAACATAGATGGCACTGTGGCAGCCTACAGACTGCCCTACCTGCTGGCTGGGGACAGTGTGGTGCTGAAGCAGGACTCTGGTTACTATGAACACTTCTACAGCCAGCTCAGACCCTGGGAACACTACATCCCCATCAGAGCAGACCTGGCTGACCTGCAGGAGAAGATCCATTGGGCCCGTGAGCAAGATGAGGAGGCAAGAAAAATCGCAGTAGCCGGTCAACAATTTGCCCGAAATCATCTAATGGGCGACAGTATATTCTGCTACTACTACAAACTCTTCCAGGAGTATGCCAAGTTGCAGGTGACTGAGCCTAAGGTCAGAGAGGGCATGGAACAGGTCGAGCAGCCCAATGATGACCTCTTCCCATGCTCCTGCCACCGGACACCACAGGTCAAGGATGAATTATGATTTGTCCACTGTTCAATTATAAAACAATCGCATTTTTATCGGATGTTCCTGTGctgtaaaatgtttgtttttttttgggggggggggcaaaatgtGAATTGTGGGCTTGTCAGTCACCCTAACCATACATGATTGTTAGTTTCCACATGTTTATAATAAATATTTTTTCATTGTATGCA

Function

NR:

description
KDEL motif-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958783.1 False 2139 mRNA 0.50 10 14132159 14156704
XM_036958784.1 True 2068 mRNA 0.50 9 14132159 14156711

Neighbor

gene id symbol gene type direction distance location
tex30 LOC106581745 coding downstream 555 14127591 ~ 14131604 (-)
nepro nepro coding downstream 4701 14120807 ~ 14127458 (-)
LOC110502113 NA coding downstream 288830 13838464 ~ 13843329 (-)
LOC110501426 LOC106581739 coding downstream 1156314 12963389 ~ 12975845 (-)
LOC110501425 LOC106581740 coding downstream 1180062 12942551 ~ 12952097 (-)
stxbp5l stxbp5l coding upstream 483 14157194 ~ 14392227 (-)
gtf2e1 gtf2e1 coding upstream 286817 14443528 ~ 14489125 (-)
LOC110501444 scrn3 coding upstream 408480 14565191 ~ 14570768 (-)
sp9 LOC106581755 coding upstream 426437 14583148 ~ 14588361 (-)
LOC110501449 LOC106581758 coding upstream 578597 14735308 ~ 14738738 (-)
G1779818 NA non-coding downstream 13449 14118439 ~ 14118710 (-)
G1779807 NA non-coding downstream 23541 14107240 ~ 14108618 (-)
G1779799 NA non-coding downstream 49257 14082635 ~ 14082902 (-)
G1779798 NA non-coding downstream 52209 14079504 ~ 14079950 (-)
G1779688 NA non-coding downstream 193579 13938147 ~ 13938580 (-)
G1779863 NA non-coding upstream 42067 14198778 ~ 14303481 (-)
G1779894 NA non-coding upstream 93993 14250704 ~ 14251221 (-)
G1779995 NA non-coding upstream 262495 14419206 ~ 14419417 (-)
G1779996 NA non-coding upstream 264786 14421497 ~ 14421878 (-)
G1779997 NA non-coding upstream 265911 14422622 ~ 14422858 (-)
G1778224 NA other downstream 801664 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 959180 13168780 ~ 13172979 (-)
LOC110501411 LOC106581904 other downstream 1507465 12620582 ~ 12624860 (-)
G1777441 LOC106581914 other downstream 1862045 12268217 ~ 12270114 (-)
G1777286 NA other downstream 2090537 12041108 ~ 12041622 (-)
G1781137 lrp2 other upstream 1410792 15567503 ~ 15568534 (-)
b3galt1b LOC106581793 other upstream 1529145 15684423 ~ 15825221 (-)
LOC110501514 dapl1 other upstream 2900411 17057104 ~ 17063550 (-)
G1783895 LOC106581829 other upstream 3712818 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 5018856 19175567 ~ 19179266 (-)

Expression


Co-expression Network