mettl5 (mettl5)


Basic Information

Item Value
gene id mettl5
gene name mettl5
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 15354532 ~ 15358880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579058.2
CGGATTGTTTTCATTGAGACCCCACTAATGCGGAAGTGTGACTCTGTACACCTTCCCCGTGGCTCTGAAGAGGGGTGTGCTGTGAGTTTTAGCATTCTATGCCATATTCTAGCTCAAATGTGGCCAGCAAATGTAAACAATCAAACCAATTCTTGGATTGCATTTACAGGGAGCAGCTATCGAGTACAATCTAGCTTCCTTGATATATGTTGTCTTTCCGATTGGGCTCGCGGCGTTGAGTGTATAGCTGTATAGCTGTTAGTTGTAGCAGGTCAAGGTTTGCTATCCAGCCAATATGAAACTGAAAGAGTTGGAAAGTTGTCTTCAACAAGTGGACGCCTTTGAAGAACCCAAAATTCTTCTTGAACAATATCCAACCAGCCCTCACATTGCAGCATGTATGCTTTATACAATCCACAACACATTTGATGACATCGAGGGCAAATTGGTTGCAGATTTGGGATGCGGATGTGGCGTTCTTAGCATTGGAGCAGCAATGCTTGATGCAGGTTTGTGTGTTGGGTTTGACATTGATGACGATGCACTGAAGATATTCAAAAGGAACTCTGAGGAATTTGAGCTGACCAACGTAGACCTGATCCAGTGTGACATGTGCTCCCTGAGATCCCATGCATATGCCAAGAAATTTGACACTGTGATAATGAATCCTCCATTTGGTACCAAACACAACCAAGGTATGGACATGCAGTTTCTGAGGACGGCTTTAACTATGGCAACAACAGCAGTATATTCTCTTCACAAAACATCAACACGAGGCCACATACAGAAGAAAGCAAGTGACTGGGGAGTAAAAATGGAAGTAATAGCAGAGCTAAGATATGACTTGCCAGCGTCCTACAAGTTCCACAAGAAGAAATCGGTTGACATCAAGGTGGACTTTCTACGGTTTTCCACAACATGAAGCCTCCACTGGAATGGAATAAAGTTGTTTTCAATGGGTATCTTTTCAAATAAAATGCTTCAACGAGACGTGCTAGTACATTTAAGAACCATTTTCAGTTTTGACAACTTTTGCAGCTGGAGCATCAGCATCTTTGCACACTCCTTCCAGGGCTCGCTTCTTCGGGCTAGGAGGTGCTATTGGAGAAATGGAAGTTAGAAAAGATACTCAATTGTTCATAATTGACAGACATGTCTCAGCAGAATCATATCATTATATTGCGTGATTAACATAACTACTTTTACcgtcatcatcactatcatcaaaTTTGGTCTTTCTGCCTTGGTAGTGTGATTTGCCATCACGTCCACCCCTGTCCCTtcgtcctcctctcccccctctaccaCCTGATTTTCGGCCACCTGTAAAGAGGAAATGCACCATCAGATCAGAAATGACATTATgaagatacatttaaaaaaacgccTTAATCAGTTACCTCTACCACCTCGACGTCTGTTGAGAGATTCCTGTTGGTCTTCAATTATCTTTTTCAGAGCTTCCCTCTCTGCatctccctctaccacctcccacGTAACGTCTTCGCCTTTAATTTTCAAGTTTCCTCCACTTGCTTCCTTTGCCTTATCAAGAGCTTCCTTGGCACTCACTCTGAAGAGGATGGTACCCTATAAGATAAATAATTATTTCTTATGACATTCATTTGTAATTGAAGGGTGGTTCAAATGGTTTATTACACTGCAATTACTACCTCTTTGGCACCCCTGGTGAAATCAATCCATTTGATTTGACCATGACCTGAGAACACCTCGTGAAAGTCCTCTCTTGAAACACTGTCAAGATTGCCTGAGAACTTCAACAGGCATCCGGTCTGCTCGTCCAGAGATTTCTACAGTGTAAAATAAAGCAGCGGACCTTTAGAACAACTTTAAACCTCCCTGTTTTGGGAAGAAAAATACAAATAGGGTCCTATTCAATAGAAGCAAACAGGAGAAAATGGCTTAAATAGGTTTTGGTGCTACACAAACTTGTCCAATAACAGATGCTACTTTCAAAATGTTCAGCCATAATGAAAACCCTTTCAAAACAATCTCAATAAGGATTTGTGATAGCACTTCCAGAGATCTTACCATTTCCTCTTCCtctgcttgtttttgtttttcgtCCTTGTCACTGTAAAACAAATTTAATTTGGAACAATTTACTTTAACATAAAAAAACATTCAGGAAGAAAAAACATGATTAAAAGGTCAGTAATGTGCTCACTGTTTAGCCTTAGCCTTGGACTCTGCTTTTAACAGTTTTCTATCCTCTGATTTCTTTGCATGGTAGTCCTCTCTGAAAACACAAGAGCAGAGTTAATTCATACCCTTTTCACCATATAAGACTTGGTCGCGGTAGTTTAGCCTCCGCCTACCTTGAAAGTATAATCATTTCATTTTCTTTGAATGATTTGGTGTCTGTGCGTGCTAGGAACTGCTTTGATGCTTCTTCAGTGTCAAAAACCAGGAATACtgagccctgaaaatggatggagaTGCTGAGTGTTTTGTATTACACGCATTGTTTTCATGTACCAAATAAACTTCCCCCTGGTGGGACAATAAAGTTGATCTGAATCACCTT

Function

symbol description
mettl5 Predicted to enable S-adenosyl-L-methionine binding activity and rRNA (adenine-N6-)-methyltransferase activity. Predicted to be involved in positive regulation of translation; rRNA methylation; and stem cell differentiation. Predicted to act upstream of or within methylation. Predicted to be located in nucleus; postsynapse; and presynapse. Used to study autosomal recessive intellectual developmental disorder-72. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder-72. Orthologous to human METTL5 (methyltransferase 5, N6-adenosine).

NR:

description
methyltransferase-like protein 5

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579058.2 True 2548 mRNA 0.41 7 15354532 15358880

Neighbor

gene id symbol gene type direction distance location
LOC110501461 tlk1 coding upstream 206201 15122642 ~ 15148331 (+)
mettl8 mettl8 coding upstream 237379 15104378 ~ 15117153 (+)
LOC110501456 LOC106581769 coding upstream 288730 15045334 ~ 15065802 (+)
LOC110501453 LOC106581766 coding upstream 384531 14967670 ~ 14970001 (+)
ppp1r9ala LOC106581761 coding upstream 469344 14851810 ~ 14885188 (+)
fastkd1 fakd1 coding downstream 42912 15401792 ~ 15415120 (+)
lrp2a lrp2 coding downstream 144180 15503060 ~ 15572970 (+)
abcb11a LOC106581787 coding downstream 231840 15590720 ~ 15607266 (+)
spc25 spc25 coding downstream 251367 15610247 ~ 15614355 (+)
stk39 stk39 coding downstream 289033 15647913 ~ 15683499 (+)
G1780483 NA non-coding upstream 55070 15278765 ~ 15299462 (+)
G1780482 NA non-coding upstream 77229 15276395 ~ 15277303 (+)
G1780479 NA non-coding upstream 80806 15273296 ~ 15273726 (+)
G1780477 NA non-coding upstream 83343 15270980 ~ 15271189 (+)
G1780476 NA non-coding upstream 83838 15269322 ~ 15270694 (+)
G1780563 NA non-coding downstream 34353 15393233 ~ 15393449 (+)
G1780580 NA non-coding downstream 78809 15437689 ~ 15437905 (+)
G1780583 NA non-coding downstream 82046 15440926 ~ 15441170 (+)
G1780584 NA non-coding downstream 83048 15441928 ~ 15442170 (+)
G1780491 NA other upstream 6866 15291362 ~ 15347666 (+)
G1780353 NA other upstream 310889 15038099 ~ 15043643 (+)
G1779636 NA other upstream 451272 14902795 ~ 14903260 (+)
G1779170 NA other upstream 1274793 14079497 ~ 14079739 (+)
LOC110501417 LOC106581898 other upstream 2566954 12756352 ~ 12787590 (+)
G1780575 NA other downstream 65831 15424711 ~ 15433820 (+)
G1781293 LOC106586198 other downstream 480724 15839604 ~ 15848595 (+)
G1781423 LOC106581799 other downstream 703877 16062757 ~ 16063401 (+)
G1781813 NA other downstream 913509 16272389 ~ 16273110 (+)
G1782390 NA other downstream 1647154 17006034 ~ 17041673 (+)

Expression


Co-expression Network