klhl41a (LOC106586209)


Basic Information

Item Value
gene id klhl41a
gene name LOC106586209
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 15414900 ~ 15423802 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579068.2
ATGGATCCGAAAGCCGTAAGGGAAGATCTGCGCCTGTTTCAGAGCACCCTGCTCCAGGATGGCCTGAAAGAGCTTCTGAACAAGAACAAGCTTATTGACTGCATTCTGAAAGTGGGAGATAGAAGCTTGCCCTGTCATAGACTCATTTTGGCAGCCTGTAGTCCTTATTTCCGAGAGCTTTACATCTCAGGTGACGCTAAGGAAATGGATAAGGAGGTCGTTCTGGAGAATTTGGATCCCACAATCATGGAGATGATTGTGAATTACATGTATTCAGCAGAGATTGACATCACAGACGACAATGTGCAGGATATCTTTGCTGTGGCAAACCGTTTCCAGATCCCCTCAGTGTTCACTGTGTGTGCAAATTTCCTACAGAAGAAGCTGTCCCCGGGTAACTGTATGGCCATATTCAGAATGGCACTGGTGCTCAACTGTCCTAGACTGGCATTGGCAAGTCGAGACTACATTGCAGATCGTTTTGAAACCCTGGCCAAGGAGGATGACTTCTTAGAGCTGGCTTCTCATGAACTTTTTGCTGTCATCGGAGCAGACTCTCTCAGTGTAGAAAAGGAGGAGGTGGTGTTTGAATCCCTGATGAAATGGATTCGAAAAGACAAGGAGAACCGTGTCAAGACTCTGGATGAGGCCTTTGGCTGCGTCCGTTTCCGTTTACTCCCAGAGAAGTACTTCAATGAGAAAGTGGAAAAGGATGACATCATCAAGTCTGACCCTGAGCTCCTCAAAAAAATCAAAGTGATCAAAGATTCCTTTTCTGGGAAACTCCCCGAAAAGAAGACAGGAGAGTTAGGGAAGGATGCATCTAATGGTGAAGTAGAAGAGGATAACAGGTTACCTAGTTACCTGAATGATATCAAGAGAGTTGGTATGTATTCCAAGGATCTTGTGTTGATGATCAACGACACTGCTGCAGTGGCCTATGATGGCGTTGAGAACGAATGCTTCCTTGCTGCATTGACTGAGCAGATACCACACAACCATGTCAGCCTGACGTAAGAGAAGAATGATCTCTTTATCCTGGGAGGATTGTTTGTCGATGAAGAAGATAAAGAAGCTCCATTACAGTGCTACTTTTATCAGCTGGATATCCTTGCTGCTGATTGGATAGCTCTGCCCCCTATGCCCTCTCCCAGATGTCTGTTCAGTATGGGAGAATTTGGCAATAAATTGTTTGCTGTAGCTGGTAAAGATCTACAGTCCAACGTGTCTCTTGACTCTGTAATGTGCTATGATGTTGAGGCAATGAAGTGGGCTGAGACCAAAAAGCTGCCTCTGAAAATCCATGGTCATAGTGTTGTATCCCAGAATGGGTTGGTGTACTGTATCGGAGGGAAGACAGATGACAACAAAGCAACCAATAAGATGTTTGCGTACAACCACAAGAAGTCAGAATGGAAGGAGCTGTCTGCTATGAAAATGGCAAGATCCATGTTTGGGGCAGTCGTTCACAATGGGAAGATTGTGGTGACTGGAGGGGTCAATGAAGATGGTGTCACCGCTGCATCTGAAGCATATGACTTTGGAAACAACAAGTGGGTGCCCTTCACAGATTTCCCCCAGGAGAGGAGCTCCGTGAACCTGGTCAGTAGTGGAGGATTGCTGTATGCCATTGGAGGCTTTACCATTGTGGCGACGGAGGACGACAAAGTTGCCCCTACGGAAATCATTGACGTCTGGCAGTATGAGGAGGATAAAAGTGAATGGACCGGAATGCTCAAAGAGATGCGTTATGCCGCAGGGGCCTCCTGTGTTATGCGCCTCAATGCCGCCAAAATGCCTAAATTATGAACAAGAACACAATATGTACTGTCTAGATGTAACATGGAGGACTGAGAAAAGTATTTATTTAAAAGTGACTTATCCAGATCCTTCAGGATTGTAACCCACCATAATATTGTATTTTGTTGCCCGTCTTTGTAAagtttattgaacctttatttaacaaggcaagacAGTTTAGAAAAAATTATTATCTACAATGACCAGCTACCAAAAGGATAAAgacctcctgcagggacgggggctgcagcaaaaaaaaaataggacaacacacacacacatcacgacaagagagacaacacaacataaagagagatctaagacaacatagcatggcagcaacacagcatggtagcagaacaaaacagggtacaaaaaAGGGCAAGAAAGTAAAGTTTGTACCTTAAA

Function

NR:

description
LOW QUALITY PROTEIN: kelch-like protein 41

GO: NA

KEGG:

id description
K10473 KBTBD5_10; kelch repeat and BTB domain-containing protein 5/10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579068.2 True 2208 mRNA 0.45 7 15414900 15423802

Neighbor

gene id symbol gene type direction distance location
LOC110501472 ppig coding downstream 13194 15394975 ~ 15401706 (-)
phgdh LOC106581777 coding downstream 35756 15365708 ~ 15379144 (-)
klhl23 klhl23 coding downstream 49332 15361643 ~ 15365568 (-)
LOC110501467 lab coding downstream 54573 15356850 ~ 15360327 (-)
LOC110501466 ubr3 coding downstream 60453 15314159 ~ 15354447 (-)
bbs5 bbs5 coding upstream 916 15424718 ~ 15433882 (-)
col28a2a LOC106581781 coding upstream 22250 15446052 ~ 15480514 (-)
zgc:172182 LOC106581782 coding upstream 73370 15497172 ~ 15501749 (-)
rdh1 LOC106581784 coding upstream 153269 15577071 ~ 15580959 (-)
dhrs9 LOC106581786 coding upstream 157517 15581319 ~ 15586397 (-)
G1781027 NA non-coding downstream 26930 15387764 ~ 15387970 (-)
G1781025 NA non-coding downstream 28449 15385933 ~ 15386451 (-)
G1781021 NA non-coding downstream 35215 15379432 ~ 15379685 (-)
G1780923 NA non-coding downstream 144771 15269756 ~ 15270129 (-)
G1780969 NA non-coding downstream 145310 15267522 ~ 15269590 (-)
G1781106 lrp2 non-coding upstream 110231 15534033 ~ 15538622 (-)
G1781137 lrp2 non-coding upstream 144127 15567503 ~ 15568534 (-)
G1781192 NA non-coding upstream 248421 15672223 ~ 15678026 (-)
G1781203 NA non-coding upstream 265987 15689789 ~ 15690167 (-)
G1781260 NA non-coding upstream 361219 15785021 ~ 15796656 (-)
G1778224 NA other downstream 2084405 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 2241921 13168780 ~ 13172979 (-)
LOC110501411 LOC106581904 other downstream 2790206 12620582 ~ 12624860 (-)
G1777441 LOC106581914 other downstream 3144786 12268217 ~ 12270114 (-)
G1777286 NA other downstream 3373278 12041108 ~ 12041622 (-)
b3galt1b LOC106581793 other upstream 262054 15684423 ~ 15825221 (-)
LOC110501514 dapl1 other upstream 1633320 17057104 ~ 17063550 (-)
G1783895 LOC106581829 other upstream 2445727 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 3751765 19175567 ~ 19179266 (-)

Expression


Co-expression Network