dhrs9 (LOC106581786)


Basic Information

Item Value
gene id dhrs9
gene name LOC106581786
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 15581319 ~ 15586397 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579074.2
GTACGTCGACCGTCCataaaaaatgtgttaaataaaGTTTCTTCACACACCGGAAGGTGAAGAACACAGAGAAAAATACAACTATTTTAGGACAAGGAATACAGTCACTGATGTTACACTATTACCAGCCACTCAACAAGCGTACTTGGGGGAGCACAATTCTGTCGCCTGGGAAATGTTCCTgtacattattggactggtggcTTTTTGGTTTGTGTTCCGCTGGTACAGGGAACTCGCAAGAGTACCCAATAAAGGAGAGAAATATGTCTACATCACTGGCTGTGACTCTGGGTTCGGGAACCTTCTGGCCAGACACCTGGACAAGCTGGGCTTCTGTGTGATCGCAGCCTGCTACACTGAGAAGGGGGAGGATGAGCTGAAGAAGGTCTCTTCTGAACGATTGAATACAGTCCACCTGGATGTCATCAGCACTGACAGTGTCAACAAAGCAACAGCATTCATCAAAACCTTGGTTGGGGAGAAGGgTCTGTGGGCTGTGGTGAACAATGCTGGAGTCTCTGTACCATCAGGTCCCTGTGACTGGATGACCGTTGACGACTACAAGTCCATGTTGGATGTTAACCTTATTGGAGTCATTGGTGTGACTCTGAGTGTCCTGCCCCTCATCAAGAAGGCCAGGGGCAGGGTGGTGAATGTGGCCAGCGTGTTTGGGAGGATAAGCGCCTTTGGGGGTCCCTACTGTGTGTCAAAATATGGAGTGGAGGCTTTCAATGACAGTCTACGGATGAACATGTCAGCGTTTGGAGTTAAAGTCCTGTGTCTTGAACCAGGATTTTTCAAAACAAGTGTGACTGATCTAAATCTCCTGAGAAAGAATGTAAAGACATTGTGGGATAATCTGTCTGAAGAAATCAAAGATCAATATGGACATGATTACCCAGAGAGAGCAAATGTGACATTGGAGAAGAATGTTGCGACGTTGCTGGATGGGGACCTGATGAAGGTTGTGAGCTGCATGGAGCACGCCATCTCTGCTCTCCACCCTCGTACCCGCTACTCACCTGGCTGGGATGCCAAGTTCTTATGGTTGCCAATGTCCTACCTGCCAACTTGGATCGCTGACAAAATGCTCTTAAAAGATATGGCCAAACCAACAGGATCTATTCTTTAATGTTAATGGTTGTCTGACCAAAAGTAAGAACAAGTCTTTATTTACACCCACGGGACAGCAAGAAaaatgccatttttttttttccaaTGAGAAAAAAGTATTGTCATTGATTCAACCAATTGAATGAAAAATGAACAAACTTAAACAGAGTTGGGATTTGCGTTTTGTCTAATCACATTTTGTATATGTATGGTGTTTCACTGGTCTGATAATAAAATTGAATGGAAAGAG

Function

NR:

description
retinol dehydrogenase 3-like

GO:

id name namespace
GO:0031017 exocrine pancreas development biological_process
GO:0001501 skeletal system development biological_process
GO:0048546 digestive tract morphogenesis biological_process
GO:0042572 retinol metabolic process biological_process
GO:0042574 retinal metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0035138 pectoral fin morphogenesis biological_process
GO:0004745 retinol dehydrogenase activity molecular_function

KEGG:

id description
K11154 RDH16; retinol dehydrogenase 16

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579074.2 True 1366 mRNA 0.45 5 15581319 15586397

Neighbor

gene id symbol gene type direction distance location
rdh1 LOC106581784 coding downstream 360 15577071 ~ 15580959 (-)
zgc:172182 LOC106581782 coding downstream 79570 15497172 ~ 15501749 (-)
col28a2a LOC106581781 coding downstream 100805 15446052 ~ 15480514 (-)
bbs5 bbs5 coding downstream 147437 15424718 ~ 15433882 (-)
klhl41a LOC106586209 coding downstream 157517 15414900 ~ 15423802 (-)
nostrin nostrin coding upstream 28015 15614412 ~ 15618681 (-)
cers6 cers6 coding upstream 37060 15623457 ~ 15645629 (-)
b3galt1b LOC106581793 coding upstream 98026 15684423 ~ 15825221 (-)
xirp2b LOC106586198 coding upstream 250622 15837019 ~ 15870045 (-)
LOC110501489 LOC106581797 coding upstream 360068 15946465 ~ 15957499 (-)
G1781137 lrp2 non-coding downstream 12785 15567503 ~ 15568534 (-)
G1781106 lrp2 non-coding downstream 42697 15534033 ~ 15538622 (-)
G1781027 NA non-coding downstream 193349 15387764 ~ 15387970 (-)
G1781025 NA non-coding downstream 194868 15385933 ~ 15386451 (-)
G1781021 NA non-coding downstream 201634 15379432 ~ 15379685 (-)
G1781192 NA non-coding upstream 85826 15672223 ~ 15678026 (-)
G1781203 NA non-coding upstream 103392 15689789 ~ 15690167 (-)
G1781260 NA non-coding upstream 198624 15785021 ~ 15796656 (-)
G1781449 NA non-coding upstream 242102 15828499 ~ 15891725 (-)
G1781526 NA non-coding upstream 377607 15964004 ~ 15965985 (-)
G1778224 NA other downstream 2250824 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 2408340 13168780 ~ 13172979 (-)
LOC110501411 LOC106581904 other downstream 2956625 12620582 ~ 12624860 (-)
G1777441 LOC106581914 other downstream 3311205 12268217 ~ 12270114 (-)
LOC110501514 dapl1 other upstream 1470725 17057104 ~ 17063550 (-)
G1783895 LOC106581829 other upstream 2283132 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 3589170 19175567 ~ 19179266 (-)
G1785753 NA other upstream 3734791 19321188 ~ 19321859 (-)

Expression


Co-expression Network