stk39 (stk39)


Basic Information

Item Value
gene id stk39
gene name stk39
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 15647913 ~ 15683499 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958848.1
GACGTTTTAAACGCTTAATGTAAGAGTTAaggtagggttaaggtttggtaagggttatggtaatgGTAATGGTAAGGGCTATtcttatggttagggttagggtaggggttaaggttagggtttagggacgtcccaaggattcaGGATAGCACTAACCGTAGTAACGCTCTGCAGCAGCTGACACTTCTGTAGTCGGGAGTGAATGCACATTTTACCGTCTGTGGTCGCTAAGTAGCTagctcagcagcagcagcagcatcatggcGGAGCAAGGCGAATCTCCGGCTCCTGTCCAGAATCCGCAACCAGTGCTGACAACGAGCTGGCCAATTACCAGGGAGTCGTACGAGTTACAGGAAGTCATAGGCAGCGGGGCCACAGCCGTAGTGCAGGCTGCCCTCTGCACCCCCAGACAGGAACGCGTGGCCATAAAGAGAATCAACTTGGAAAAATGCCAGACCAGCATGGATGAGCTATTGAAAGAAATTCAAGCCATGAGCCAATGCAACCATCCAAATGTTGTCACCTACTACACCTCATTTGTGGTAAAGGATGAACTTTGGTTAGTCATGAAACTTCTGAGTGGAGGATCCATGTTGGATATAATAAAGCATACCTTTAGCAGAGGAGAGCACAAAAATGGAGTTCTAGATGAGCTCATCATTGCAACCATACTAAAAGAGGTCCTTGAGGGGCTGGACTACCTGCATAGAAACGGACAGATTCACAGgGATGTGAAGGCTGGGAACATTCTGTTGGGAGAGGACGGATCTGTTCAGATTGCAGATTTTGGAGTTAGTGCCTTTTTGGCCACTGGAGGAGATatgaccagaaacaaagtacGGAAGACTTTTGTGGGCACACCATGTTGGATGGCCCCTGAGGTGATGGAACAGGTACGAGGCTATGACTTCAAAGCAGACATTTGGAGTTTTGGAATCACTGCCATAGAGTTGGCCACAGGGTCTGCACCTTACCACCGATACCCACCCATGAAGgTCTTAATGCTGACCTTACAGAACGATCCTCCCACCCTAGACACGGGTGTGGAGGACAAAGAGATGCTGAAAAAATATGGGAAATCGTTTAGGAAGCTAATAACCCTGTGCCTTCAGAAGGAGCCCGCCAAGAGGCCTACAGCAGCAGAACTTTTGAAATGTAAATTTTTCCAGAAAGCCAAGAACAGAGAATATCTGATCGAAAAGCTGCTATGCAGAGCCCCGAACATAACCCAGAGAGCCAAAAGGGAGCCAGAGCAGAATTCCAGGAGCATGGGCTCTGTGTCAGGTTCAGCGAAAGAACTTGATGCCATCAGAAGGGTGAGGAGAGTTCCAGGGTCCAGTGGCCACCTGCACAAGATGGAGGACGGAGACTGGGAGTGGAGCGATGACGAGCTCGATGTAGGGAGTGAGGAGGGCAAGGCTGCTGTCAATCAAGGCAGGTCGCGAAGGCTCAGAGAGGACAACGAAGACGAGGGCGAAGATGATGaggagaatgccaatagtgttcCCATTGAAGGGCTATCCATTCAGCATCCCCAGGTGCAACCGTTTGAGAAGAACACAGGGCCCTATATTCAAGTTGCTCTGAATATGGTCCTAAGGCTAAGGGATTGAATTAGAGCAGGGATggacaactttgatgggggtaggggccacaaaaaaatctgaattcaTCATGAGGGACTGCACAGTTGCTGGCAGGTCTGCGTAGTCACAtccataccccccccccaccaagtgGCCCCCTTGACAGTGGAGAGAAATGCTTCAAGTTTTAGAGTTCATTTTGTGCAATTGGACTCATTTTGCCATTGGGCGGAGAGGAAAATAAGCTGTTTTAGAACTATtttcctgcaattatacacattttgccatagggtggagagaatgTTTACAGTTCTGACTATGATATGGGAGTGAGAGTTACTAAAATCAAATCAATATAGGACCCTGGCCGGTAATAAAACCATGATAAAAAATGTAGATAGCTGGCTGCTAAACTAATTTAGCAATCTAAATAACTTTTGCTGAAATTAGCTATTTCAttgactatcagtgactgacctaacaagagagaaactgctgatcgtcctcgcagtggcagaccagatgtaacaacacctgcacaggatcggtac
>XM_021579082.2
GTTTTAAACGCTTAATGTAAGAGTTAaggtagggttaaggtttggtaagggttatggtaatgGTAATGGTAAGGGCTATtcttatggttagggttagggtaggggttaaggttagggtttagggacgtcccaaggattcaGGATAGCACTAACCGTAGTAACGCTCTGCAGCAGCTGACACTTCTGTAGTCGGGAGTGAATGCACATTTTACCGTCTGTGGTCGCTAAGTAGCTagctcagcagcagcagcagcatcatggcGGAGCAAGGCGAATCTCCGGCTCCTGTCCAGAATCCGCAACCAGTGCTGACAACGAGCTGGCCAATTACCAGGGAGTCGTACGAGTTACAGGAAGTCATAGGCAGCGGGGCCACAGCCGTAGTGCAGGCTGCCCTCTGCACCCCCAGACAGGAACGCGTGGCCATAAAGAGAATCAACTTGGAAAAATGCCAGACCAGCATGGATGAGCTATTGAAAGAAATTCAAGCCATGAGCCAATGCAACCATCCAAATGTTGTCACCTACTACACCTCATTTGTGGTAAAGGATGAACTTTGGTTAGTCATGAAACTTCTGAGTGGAGGATCCATGTTGGATATAATAAAGCATACCTTTAGCAGAGGAGAGCACAAAAATGGAGTTCTAGATGAGCTCATCATTGCAACCATACTAAAAGAGGTCCTTGAGGGGCTGGACTACCTGCATAGAAACGGACAGATTCACAGgGATGTGAAGGCTGGGAACATTCTGTTGGGAGAGGACGGATCTGTTCAGATTGCAGATTTTGGAGTTAGTGCCTTTTTGGCCACTGGAGGAGATatgaccagaaacaaagtacGGAAGACTTTTGTGGGCACACCATGTTGGATGGCCCCTGAGGTGATGGAACAGGTACGAGGCTATGACTTCAAAGCAGACATTTGGAGTTTTGGAATCACTGCCATAGAGTTGGCCACAGGGTCTGCACCTTACCACCGATACCCACCCATGAAGgTCTTAATGCTGACCTTACAGAACGATCCTCCCACCCTAGACACGGGTGTGGAGGACAAAGAGATGCTGAAAAAATATGGGAAATCGTTTAGGAAGCTAATAACCCTGTGCCTTCAGAAGGAGCCCGCCAAGAGGCCTACAGCAGCAGAACTTTTGAAATGTAAATTTTTCCAGAAAGCCAAGAACAGAGAATATCTGATCGAAAAGCTGCTATGCAGAGCCCCGAACATAACCCAGAGAGCCAAAAGGGAGCCAGAGCAGAATTCCAGGAGCATGGGCTCTGTGTCAGGTTCAGCGAAAGAACTTGATGCCATCAGAAGGGTGAGGAGAGTTCCAGGGTCCAGTGGCCACCTGCACAAGATGGAGGACGGAGACTGGGAGTGGAGCGATGACGAGCTCGATGTAGGGAGTGAGGAGGGCAAGGCTGCTGTCAATCAAGGCAGGTCGCGAAGGCTCAGAGAGGACAACGAAGACGAGGGCGAAGATGATGaggagaatgccaatagtgttcCCATTGAAGGGCTATCCATTCAGCATCCCCAGGTGCAACCGTTTGAGAAGAACACAGGGCCCTATATTCAAGTTGCTCTGAATATGGTCCTAAGGCTAAGGAACTCCAGGAAGGAGCTGAATGACATCCGCTTTGAGTTCACTCCTGGCCGAGACACGGCTACTGGGGTTTCCCAGGAACTGTTCTCAGCTGGTCTTGTCAATGGACACGATGTTGCTGCCGTTGCGGCTAACCTTCAGAAGATTGTAGATGACCCGACCACCTACAAAGTGTTGACCTTTAAACTGgttTCTGGCTGTGATGACACGGAGATCGCAGATGACGTGAAGCTGATCGGCTTCGCCCAGCTGAGTGTTAGCTGATGCCCCCCTCATCATGGCCAAAGCAGTTGAGATGGAGGAGGTGggtcagagcagacagacagacagaccgagaagcACCAGACACACCCCTTTCTCCCCTTCTTCCATTCTCCCCTCCCTGCCCTGATGCCCAGCTCTGTCACAGTTCAGCTAGCCCCCCCTCCCCGACGACATTCCACCGCCAAGAACCCCCACCCAGGCCAGACCAGCGGACGGACCAGGATTCAGCCCAGGAAACTAAAGATGTACACAGGCGGTAGTAGCTGAGGATTAAACAAAGTGGCTTaggagttgttgttttttttgtttttttttatcatggTACCTCTGCTTTCAGCGAAACTCTTACTATTATTTATTACATTGAGAATGCCTTTTATTTGTTTCTCACTGTTGTGTTTTCACAGTGAAAAATATATTCTTCAACTTCCATTTCAGACCACTCATTTGAGATAAAGAAATGTTCCTCAGCGGTCTGTATTGTAGTCCCTGTTCAGAATGTACGATTTCTTTTATTGACGGAGAAAAAAAAGCACATTTTCGTGATAAACATAATGAATGTTTTAAAAGGAATTAGCTGTACTGTGTATAGATGATAGTAAACCAATACATTTATGGGACCCATTTTCGGTGAAAGTGACGGAAGCCTGCTGACGTGTAAATGTGCTGCTTCTTCATAAGACAGTGTTGATGCTTAAAAATGCTAGAGGTGCCTTGTTCCTTGATCTGTGCCTAAGAACGTAGGTAATGTGTGAGACCGCGAACAGCAGAACTTTGTTTGTTTGGACCATTTCACAAACATACATGCCTATATTCCAGCAGTGATACAACTCAATGGTAGTATTTTCTCAAGTCAATAGTTAAGGACAAGCTACAATGCACTTTTGGGGCAGATTATATGCACCTGACAAAACAATGCTTAGCCCTGGGAGACTTGTGTTATGAATTGTAATGAGAATTTAACCTGTATTCTTTGTCATTACATAATGGTGATTTGAACCATAACCCAAACCTTAATTCTGTAATATGCTTCAGTTAATGTGTTTTCCCGAAGCCAAATTAATTGATAAAATCTTGAAAAACTCAGTTTCTTGCTCTGACTTACTGCACTACAAGATGTTTTTTCCGACATATTATTCTCTGAAATGTACTGTATAACAATGCATCCGCAAACGAAACCCAAAGGAAACTATTGAAATGTTGATGAGCCATTAATTTGTCCAAAACAAGTACAGTAGCTCTAAATTATTTTCTGAAGTATTGAAAGTGGTAAACAAATATTAACTTGTTCTAAATACTTTATTTCAAGAGGTAAGTTATTGTGTTTTCTATGTACAGTAGTTGTACCATTTACGCATATTATCTTTGTTCTGTAATCGGCTGattaaaaacatttctgcagaggA
>XM_021579083.2
TTAAACGCTTAATGTAAGAGTTAaggtagggttaaggtttggtaagggttatggtaatgGTAATGGTAAGGGCTATtcttatggttagggttagggtaggggttaaggttagggtttagggacgtcccaaggattcaGGATAGCACTAACCGTAGTAACGCTCTGCAGCAGCTGACACTTCTGTAGTCGGGAGTGAATGCACATTTTACCGTCTGTGGTCGCTAAGTAGCTagctcagcagcagcagcagcatcatggcGGAGCAAGGCGAATCTCCGGCTCCTGTCCAGAATCCGCAACCAGTGCTGACAACGAGCTGGCCAATTACCAGGGAGTCGTACGAGTTACAGGAAGTCATAGGCAGCGGGGCCACAGCCGTAGTGCAGGCTGCCCTCTGCACCCCCAGACAGGAACGCGTGGCCATAAAGAGAATCAACTTGGAAAAATGCCAGACCAGCATGGATGAGCTATTGAAAGAAATTCAAGCCATGAGCCAATGCAACCATCCAAATGTTGTCACCTACTACACCTCATTTGTGGTAAAGGATGAACTTTGGTTAGTCATGAAACTTCTGAGTGGAGGATCCATGTTGGATATAATAAAGCATACCTTTAGCAGAGGAGAGCACAAAAATGGAGTTCTAGATGAGCTCATCATTGCAACCATACTAAAAGAGGTCCTTGAGGGGCTGGACTACCTGCATAGAAACGGACAGATTCACAGgGATGTGAAGGCTGGGAACATTCTGTTGGGAGAGGACGGATCTGTTCAGATTGCAGATTTTGGAGTTAGTGCCTTTTTGGCCACTGGAGGAGATatgaccagaaacaaagtacGGAAGACTTTTGTGGGCACACCATGTTGGATGGCCCCTGAGGTGATGGAACAGGTACGAGGCTATGACTTCAAAGCAGACATTTGGAGTTTTGGAATCACTGCCATAGAGTTGGCCACAGGGTCTGCACCTTACCACCGATACCCACCCATGAAGgTCTTAATGCTGACCTTACAGAACGATCCTCCCACCCTAGACACGGGTGTGGAGGACAAAGAGATGCTGAAAAAATATGGGAAATCGTTTAGGAAGCTAATAACCCTGTGCCTTCAGAAGGAGCCCGCCAAGAGGCCTACAGCAGCAGAACTTTTGAAATGTAAATTTTTCCAGAAAGCCAAGAACAGAGAATATCTGATCGAAAAGCTGCTATGCAGAGCCCCGAACATAACCCAGAGAGCCAAAAGGGTGAGGAGAGTTCCAGGGTCCAGTGGCCACCTGCACAAGATGGAGGACGGAGACTGGGAGTGGAGCGATGACGAGCTCGATGTAGGGAGTGAGGAGGGCAAGGCTGCTGTCAATCAAGGCAGGTCGCGAAGGCTCAGAGAGGACAACGAAGACGAGGGCGAAGATGATGaggagaatgccaatagtgttcCCATTGAAGGGCTATCCATTCAGCATCCCCAGGTGCAACCGTTTGAGAAGAACACAGGGCCCTATATTCAAGTTGCTCTGAATATGGTCCTAAGGCTAAGGAACTCCAGGAAGGAGCTGAATGACATCCGCTTTGAGTTCACTCCTGGCCGAGACACGGCTACTGGGGTTTCCCAGGAACTGTTCTCAGCTGGTCTTGTCAATGGACACGATGTTGCTGCCGTTGCGGCTAACCTTCAGAAGATTGTAGATGACCCGACCACCTACAAAGTGTTGACCTTTAAACTGgttTCTGGCTGTGATGACACGGAGATCGCAGATGACGTGAAGCTGATCGGCTTCGCCCAGCTGAGTGTTAGCTGATGCCCCCCTCATCATGGCCAAAGCAGTTGAGATGGAGGAGGTGggtcagagcagacagacagacagaccgagaagcACCAGACACACCCCTTTCTCCCCTTCTTCCATTCTCCCCTCCCTGCCCTGATGCCCAGCTCTGTCACAGTTCAGCTAGCCCCCCCTCCCCGACGACATTCCACCGCCAAGAACCCCCACCCAGGCCAGACCAGCGGACGGACCAGGATTCAGCCCAGGAAACTAAAGATGTACACAGGCGGTAGTAGCTGAGGATTAAACAAAGTGGCTTaggagttgttgttttttttgtttttttttatcatggTACCTCTGCTTTCAGCGAAACTCTTACTATTATTTATTACATTGAGAATGCCTTTTATTTGTTTCTCACTGTTGTGTTTTCACAGTGAAAAATATATTCTTCAACTTCCATTTCAGACCACTCATTTGAGATAAAGAAATGTTCCTCAGCGGTCTGTATTGTAGTCCCTGTTCAGAATGTACGATTTCTTTTATTGACGGAGAAAAAAAAGCACATTTTCGTGATAAACATAATGAATGTTTTAAAAGGAATTAGCTGTACTGTGTATAGATGATAGTAAACCAATACATTTATGGGACCCATTTTCGGTGAAAGTGACGGAAGCCTGCTGACGTGTAAATGTGCTGCTTCTTCATAAGACAGTGTTGATGCTTAAAAATGCTAGAGGTGCCTTGTTCCTTGATCTGTGCCTAAGAACGTAGGTAATGTGTGAGACCGCGAACAGCAGAACTTTGTTTGTTTGGACCATTTCACAAACATACATGCCTATATTCCAGCAGTGATACAACTCAATGGTAGTATTTTCTCAAGTCAATAGTTAAGGACAAGCTACAATGCACTTTTGGGGCAGATTATATGCACCTGACAAAACAATGCTTAGCCCTGGGAGACTTGTGTTATGAATTGTAATGAGAATTTAACCTGTATTCTTTGTCATTACATAATGGTGATTTGAACCATAACCCAAACCTTAATTCTGTAATATGCTTCAGTTAATGTGTTTTCCCGAAGCCAAATTAATTGATAAAATCTTGAAAAACTCAGTTTCTTGCTCTGACTTACTGCACTACAAGATGTTTTTTCCGACATATTATTCTCTGAAATGTACTGTATAACAATGCATCCGCAAACGAAACCCAAAGGAAACTATTGAAATGTTGATGAGCCATTAATTTGTCCAAAACAAGTACAGTAGCTCTAAATTATTTTCTGAAGTATTGAAAGTGGTAAACAAATATTAACTTGTTCTAAATACTTTATTTCAAGAGGTAAGTTATTGTGTTTTCTATGTACAGTAGTTGTACCATTTACGCATATTATCTTTGTTCTGTAATCGGCTGattaaaaacatttctgcagaggA

Function

symbol description
stk39 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human STK39 (serine/threonine kinase 39).

NR:

description
STE20/SPS1-related proline-alanine-rich protein kinase

GO: NA

KEGG:

id description
K08835 OXSR1, STK39; serine/threonine-protein kinase OSR1/STK39

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958848.1 False 2140 mRNA 0.48 16 15647913 15665784
XM_021579082.2 False 3274 mRNA 0.45 19 15647916 15683499
XM_021579083.2 True 3199 mRNA 0.45 18 15647919 15683499

Neighbor

gene id symbol gene type direction distance location
spc25 spc25 coding upstream 33558 15610247 ~ 15614355 (+)
abcb11a LOC106581787 coding upstream 40647 15590720 ~ 15607266 (+)
lrp2a lrp2 coding upstream 75006 15503060 ~ 15572970 (+)
fastkd1 fakd1 coding upstream 232793 15401792 ~ 15415120 (+)
mettl5 mettl5 coding upstream 289033 15354532 ~ 15358880 (+)
LOC110501488 NA coding downstream 175667 15859166 ~ 15861044 (+)
csrnp3 LOC106581794 coding downstream 238883 15922382 ~ 15988118 (+)
LOC110501495 cobll1 coding downstream 434687 16118186 ~ 16151990 (+)
LOC110501496 LOC106581801 coding downstream 468740 16152239 ~ 16217207 (+)
LOC110501497 LOC106581802 coding downstream 645279 16328778 ~ 16338520 (+)
G1780625 NA non-coding upstream 166908 15480346 ~ 15481005 (+)
G1780585 NA non-coding upstream 202174 15444706 ~ 15445739 (+)
G1780584 NA non-coding upstream 205743 15441928 ~ 15442170 (+)
G1780583 NA non-coding upstream 206743 15440926 ~ 15441170 (+)
G1781292 NA non-coding downstream 153514 15837013 ~ 15838727 (+)
G1781333 NA non-coding downstream 270054 15953553 ~ 15972242 (+)
G1781365 LOC106581799 non-coding downstream 365354 16048853 ~ 16049113 (+)
G1781415 NA non-coding downstream 366295 16049794 ~ 16050057 (+)
G1780575 NA other upstream 214093 15424711 ~ 15433820 (+)
G1780491 NA other upstream 300247 15291362 ~ 15347666 (+)
G1780353 NA other upstream 604270 15038099 ~ 15043643 (+)
G1779636 NA other upstream 744653 14902795 ~ 14903260 (+)
G1779170 NA other upstream 1568174 14079497 ~ 14079739 (+)
G1781293 LOC106586198 other downstream 156105 15839604 ~ 15848595 (+)
G1781423 LOC106581799 other downstream 379258 16062757 ~ 16063401 (+)
G1781813 NA other downstream 588890 16272389 ~ 16273110 (+)
G1782390 NA other downstream 1322535 17006034 ~ 17041673 (+)
G1783087 NA other downstream 1612454 17295953 ~ 17296359 (+)

Expression


Co-expression Network