b3galt1b (LOC106581793)


Basic Information

Item Value
gene id b3galt1b
gene name LOC106581793
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 15684423 ~ 15825221 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958849.1
TTGATACGGTTGTCCTGTTTTTGCACTTCATTATACAGAAACATACAAGCAGTGGTTGAAATGCGCCGGTGCTCGCGTGTAGAGTACATCAAATTGGCACCTCATATTTTTTACTACTTGAGTACCgtcatttttttttatagaatACTGGCTCTAAAATAGGAACCAACCCTGGTGGGGTAGAATCACAATGTAAATGGAGACGCACAAGTGTCAAGAAGAAAAACAGGACATCTGCACGGTTTCAAACCGGATTTTCATTAAAAGGCAAACAACGACATCCCATCACTTTCCTCTAAAACAATCCATTACTGACAATTAATGTCAAGCAGCACATCAGTGCAGCATTATGCTGCCTTGCTGGAAGGAACACTGCTAATGGAAAGAAAGCCTTTTAAGATTCAATACATTAAATACATATAAATGCACCAGAATGCCTTCAAAAGTCTCATGCTTGTACGTGTTGACGGTCGTTTGCTGGGCAAGTGCTCTTTGGTACTTGGGTATATCCCGGCCGACATCCTCCTATGTCAGTGGGCAGATGTCTTTGCCGATCCGGAAGACTGTGAAAACCCTTAAGAACACTACGTTCAGCAACATCCGGACGCGAACGCTGAACCCACACGCCTTCGACTTTGTCATCAACGAGCCTAAGAAATGTGAGAGCAACACGCCCTTCCTGGTCATCCTGATCAGCACCACACACAAAGAATTCGATGCCCGTCAGGCCATCCGGGAGACCTGGGGAGATGAGAGCACCTACAGCGACATCCGCATCATCACCCTCTTCCTGCTGGGCCGCAACACGGACGCCGTCCTCAACCAGATGGTGGAACAGGAGAGCCAGATCTTCCACGACATTGTGGTGGAGGACTTCATAGACTCGTATCACAACCTCACCCTCAAGACCCTGATGGGCATGCGCTGGGTGGCCACCTTCTGCTCCCAGGCCCAGTACGTCATGAAGACGGACAGTGACATTTTCGTCAACATGGACAATCTGGTCTACAAGCTTCTGAAGCCCACCACCAAGCCCAAGAGGAGGTACTTCACGGGCTACGTCATCAACGGCGGTCCCATCAGAGACATGCGCAGTAAGTGGTATATGCCCAGAGACCTGTACCCCGAGGCTAAGTACCCCCCCTTCTGCTCGGGCACAGGGTACGTGTTCTCAGTGGACGTGGCTGAGCTGATCTATAAGACCTCTCTGCACACCAGACTGCTCCACCTGGAGGACGTGTACGTGGGACTGTGTCTGAGGAAGCTGGGCATCCACCCCTATCAGAACAGTGGCTTCAATCACTGGAAAATGGCCTACAGCCTGTGTAGGTACCGTCGTGTTATCACTGTCCACCAGATTTCACCGGAAGAAATGCACCGGATCTGGAACGACATGTCCAGCAAGAAACACCTCCGATGCTAGCACCTGGGGACAACTTGGACCCTtcttctgttttgttttgtttttttacctctCAACCTGGTGTTCTAACAAAGTTGTTTTCATTTTCTGACAACATTAGTTCTCTATAGGCTACTAGTATACTTCTACTGAATCCAATGTAGCTGTTGGGTGCATGAGGCTTGTAAAGTGCATGTTCTCATTCAAACACACACTAAGATAGTGTTGTTGCCAGTCATTTTGTAATCTCTGGTCTAGAGCTGTAGACTTCAACAACTCATTTCGATGAACATTTACTCTGTACATTTACAAGTGAAACCAGAGAGGTATTACTGAAAGACAAAATGATGTATATGTCAGTGCAAGTGTCTATCTACTTTCTGCCAAGTTCTCATGCTGTTTTGGGGATGGTACTTCCTTACAGCAGGAGAAAGCCTCCCCCACACCATGTCTCATCCCTCCTACCAGGCTTATGGATGGCCAACAGTTGTAGGCTACACCATAGTAAATACACATTGAAATAGAAACTAATGCTGCAACAATGAAAACAACAATATCTATATTCTGCAAATGTAGAACAAGTTGGAATGTTAATTGTTCTTTTCTATTGTTGCGATTTAATAAGAAATGAATACATCTCTACTGGATGTACTTTATCACTATTGGTAGTGATGTTCACTATTCACTATTGTTCAAAACTACATGTGTGGGTCAAACAGATGTTATAAatgtgatccccccccccccccggatatCTTTGTTTACATATTGGTGTAAATGTAACTGCCTCTTCATCTGGGAAGAGACAGGAAAATGCTTTTTACATTTAGATGTCATTGATCATTTCTACTCAAATTATTTTCTTACAGTGTACTTGAAGTATTTCATGGTGTCGTGCTACCTGCTTCTGATAAAACTGGCTACTATTACTGTACTCTACGTAGGTCGGATTCACGACCACGACCAAGTATCAACAGACGTTACATATCATCTTGTGCACGTGGCAATTTACATAGTAACTTTTATCTAAATTCCCAAGTGAATCTATTATAATGTGTTATTTGGCATATCTTTACTGAATCACTGCTATAGAAATAATGGGAAATAATTCAATTTTCTGGAACTTGGGATAGCTGTTATGGCCCAAATGTCATTTTcaaatgtttattattatttttgaagTATTTAGTATTATAAGCTATTGTGACATTTGACTGTGAAAGTATAAAGATATATCCTGAAGGAGGTTGTTGTGATATAAAGtatgttttttttacataaaaaaatattcatacTTGAAAAGTAATGAAA
>XM_021579084.2
GCGTTTCGCTTTAGGATGCTGAAGGCACCGCTCTCGCATCAGGACCAGAAGTCTGAATGGGATGGAGACGAAAAAATAGATGTAAATGGAGACGCACAAGTGTCAAGAAGAAAAACAGGACATCTGCACGGTTTCAAACCGGATTTTCATTAAAAGGCAAACAACGACATCCCATCACTTTCCTCTAAAACAATCCATTACTGACAATTAATGTCAAGCAGCACATCAGTGCAGCATTATGCTGCCTTGCTGGAAGGAACACTGCTAATGGAAAGAAAGCCTTTTAAGATTCAATACATTAAATACATATAAATGCACCAGAATGCCTTCAAAAGTCTCATGCTTGTACGTGTTGACGGTCGTTTGCTGGGCAAGTGCTCTTTGGTACTTGGGTATATCCCGGCCGACATCCTCCTATGTCAGTGGGCAGATGTCTTTGCCGATCCGGAAGACTGTGAAAACCCTTAAGAACACTACGTTCAGCAACATCCGGACGCGAACGCTGAACCCACACGCCTTCGACTTTGTCATCAACGAGCCTAAGAAATGTGAGAGCAACACGCCCTTCCTGGTCATCCTGATCAGCACCACACACAAAGAATTCGATGCCCGTCAGGCCATCCGGGAGACCTGGGGAGATGAGAGCACCTACAGCGACATCCGCATCATCACCCTCTTCCTGCTGGGCCGCAACACGGACGCCGTCCTCAACCAGATGGTGGAACAGGAGAGCCAGATCTTCCACGACATTGTGGTGGAGGACTTCATAGACTCGTATCACAACCTCACCCTCAAGACCCTGATGGGCATGCGCTGGGTGGCCACCTTCTGCTCCCAGGCCCAGTACGTCATGAAGACGGACAGTGACATTTTCGTCAACATGGACAATCTGGTCTACAAGCTTCTGAAGCCCACCACCAAGCCCAAGAGGAGGTACTTCACGGGCTACGTCATCAACGGCGGTCCCATCAGAGACATGCGCAGTAAGTGGTATATGCCCAGAGACCTGTACCCCGAGGCTAAGTACCCCCCCTTCTGCTCGGGCACAGGGTACGTGTTCTCAGTGGACGTGGCTGAGCTGATCTATAAGACCTCTCTGCACACCAGACTGCTCCACCTGGAGGACGTGTACGTGGGACTGTGTCTGAGGAAGCTGGGCATCCACCCCTATCAGAACAGTGGCTTCAATCACTGGAAAATGGCCTACAGCCTGTGTAGGTACCGTCGTGTTATCACTGTCCACCAGATTTCACCGGAAGAAATGCACCGGATCTGGAACGACATGTCCAGCAAGAAACACCTCCGATGCTAGCACCTGGGGACAACTTGGACCCTtcttctgttttgttttgtttttttacctctCAACCTGGTGTTCTAACAAAGTTGTTTTCATTTTCTGACAACATTAGTTCTCTATAGGCTACTAGTATACTTCTACTGAATCCAATGTAGCTGTTGGGTGCATGAGGCTTGTAAAGTGCATGTTCTCATTCAAACACACACTAAGATAGTGTTGTTGCCAGTCATTTTGTAATCTCTGGTCTAGAGCTGTAGACTTCAACAACTCATTTCGATGAACATTTACTCTGTACATTTACAAGTGAAACCAGAGAGGTATTACTGAAAGACAAAATGATGTATATGTCAGTGCAAGTGTCTATCTACTTTCTGCCAAGTTCTCATGCTGTTTTGGGGATGGTACTTCCTTACAGCAGGAGAAAGCCTCCCCCACACCATGTCTCATCCCTCCTACCAGGCTTATGGATGGCCAACAGTTGTAGGCTACACCATAGTAAATACACATTGAAATAGAAACTAATGCTGCAACAATGAAAACAACAATATCTATATTCTGCAAATGTAGAACAAGTTGGAATGTTAATTGTTCTTTTCTATTGTTGCGATTTAATAAGAAATGAATACATCTCTACTGGATGTACTTTATCACTATTGGTAGTGATGTTCACTATTCACTATTGTTCAAAACTACATGTGTGGGTCAAACAGATGTTATAAatgtgatccccccccccccccggatatCTTTGTTTACATATTGGTGTAAATGTAACTGCCTCTTCATCTGGGAAGAGACAGGAAAATGCTTTTTACATTTAGATGTCATTGATCATTTCTACTCAAATTATTTTCTTACAGTGTACTTGAAGTATTTCATGGTGTCGTGCTACCTGCTTCTGATAAAACTGGCTACTATTACTGTACTCTACGTAGGTCGGATTCACGACCACGACCAAGTATCAACAGACGTTACATATCATCTTGTGCACGTGGCAATTTACATAGTAACTTTTATCTAAATTCCCAAGTGAATCTATTATAATGTGTTATTTGGCATATCTTTACTGAATCACTGCTATAGAAATAATGGGAAATAATTCAATTTTCTGGAACTTGGGATAGCTGTTATGGCCCAAATGTCATTTTcaaatgtttattattatttttgaagTATTTAGTATTATAAGCTATTGTGACATTTGACTGTGAAAGTATAAAGATATATCCTGAAGGAGGTTGTTGTGATATAAAGtatgttttttttacataaaaaaatattcatacTTGAAAAGTAATGAAA
>TU2039451
GCTTTAGGATGCTGAAGGCACCGCTCTCGCATCAGGACCAGAAGTCTGAATGGGATGGAGACGAAAAAATAGATGTAAATGGAGACGCACAAGTGTCAAGAAGAAAAACAGGACATCTGCACGGTTTCAAACCGGATTTTCATTAAAAGGCAAACAACGACATCCCATCACTTTCCTCTAAAACAATCCATTACTGACAATTAATGTCAAGCAGCACATCAGTGCAGCATTATGCTGCCTTGCTGGAAGGAACACTGCTAATGGAAAGAAAGCCTTTTAAGATTCAATACATTAAATACATATAAATGCACCAGAATGCCTTCAAAAGTCTCATGCTTGTACGTGTTGACGGTCGTTTGCTGGGCAAGTGCTCTTTGGTACTTGGGTATATCCCGGCCGACATCCTCCTATGTCAGTGGGCAGATGTCTTTGCCGATCCGGAAGACTGTGAAAACCCTTAAGAACACTACGTTCAGCAACATCCGGACGCGAACGCTGAACCCACACGCCTTCGACTTTGTCATCAACGAGCCTAAGAAATGTGAGAGCAACACGCCCTTCCTGGTCATCCTGATCAGCACCACACACAAAGAATTCGATGCCCGTCAGGCCATCCGGGAGACCTGGGGAGATGAGAGCACCTACAGCGACATCCGCATCATCACCCTCTTCCTGCTGGGCCGCAACACGGACGCCGTCCTCAACCAGATGGTGGAACAGGAGAGCCAGATCTTCCACGACATTGTGGTGGAGGACTTCATAGACTCGTATCACAACCTCACCCTCAAGACCCTGATGGGCATGCGCTGGGTGGCCACCTTCTGCTCCCAGGCCCAGTACGTCATGAAGACGGACAGTGACATTTTCGTCAACATGGACAATCTGGTCTACAAGCTTCTGAAGCCCACCACCAAGCCCAAGAGGAGGTACTTCACGGGCTACGTCATCAACGGCGGTCCCATCAGAGACATGCGCAGTAAGTGGTATATGCCCAGAGACCTGTACCCCGAGGCTAAGTACCCCCCCTTCTGCTCGGGCACAGGGTACGTGTTCTCAGTGGACGTGGCTGAGCTGATCTATAAGACCTCTCTGCACACCAGACTGCTCCACCTGGAGGACGTGTACGTGGGACTGTGTCTGAGGAAGCTGGGCATCCACCCCT

Function

NR:

description
beta-1,3-galactosyltransferase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958849.1 False 2713 mRNA 0.43 2 15684423 15699520
XM_021579084.2 False 2602 mRNA 0.43 2 15684423 15825221
TU2039451 True 1162 TUCP 0.51 2 15685856 15825214

Neighbor

gene id symbol gene type direction distance location
cers6 cers6 coding downstream 38794 15623457 ~ 15645629 (-)
nostrin nostrin coding downstream 65742 15614412 ~ 15618681 (-)
dhrs9 LOC106581786 coding downstream 98026 15581319 ~ 15586397 (-)
rdh1 LOC106581784 coding downstream 103464 15577071 ~ 15580959 (-)
zgc:172182 LOC106581782 coding downstream 182674 15497172 ~ 15501749 (-)
xirp2b LOC106586198 coding upstream 11798 15837019 ~ 15870045 (-)
LOC110501489 LOC106581797 coding upstream 121244 15946465 ~ 15957499 (-)
galnt3 galnt3 coding upstream 164918 15990139 ~ 16000472 (-)
ttc21b ttc21b coding upstream 177326 16002547 ~ 16021067 (-)
LOC110501493 LOC106581799 coding upstream 220302 16045523 ~ 16088614 (-)
G1781192 NA non-coding downstream 6397 15672223 ~ 15678026 (-)
G1781137 lrp2 non-coding downstream 115889 15567503 ~ 15568534 (-)
G1781106 lrp2 non-coding downstream 145801 15534033 ~ 15538622 (-)
G1781027 NA non-coding downstream 296453 15387764 ~ 15387970 (-)
G1781025 NA non-coding downstream 297972 15385933 ~ 15386451 (-)
G1781449 NA non-coding upstream 3278 15828499 ~ 15891725 (-)
G1781526 NA non-coding upstream 138783 15964004 ~ 15965985 (-)
G1781564 NA non-coding upstream 234755 16059976 ~ 16060205 (-)
G1781567 NA non-coding upstream 240984 16066205 ~ 16066526 (-)
G1781570 NA non-coding upstream 249305 16074526 ~ 16074811 (-)
G1778224 NA other downstream 2353928 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 2511444 13168780 ~ 13172979 (-)
LOC110501411 LOC106581904 other downstream 3059729 12620582 ~ 12624860 (-)
G1777441 LOC106581914 other downstream 3414309 12268217 ~ 12270114 (-)
LOC110501514 dapl1 other upstream 1231901 17057104 ~ 17063550 (-)
G1783895 LOC106581829 other upstream 2044308 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 3350346 19175567 ~ 19179266 (-)
G1785753 NA other upstream 3495967 19321188 ~ 19321859 (-)
znf142 znf142 other upstream 3831061 19655763 ~ 19666201 (-)

Expression


Co-expression Network