LOC110501514 (dapl1)


Basic Information

Item Value
gene id LOC110501514
gene name dapl1
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 17057104 ~ 17063550 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579151.2
ATGTGCCAATCGAtctattaaataaaacaatgtaaCTGTTTGAGGCTGCTCACGCCATATGTCTGGTCCACTCGTGTGGAATAAATGAGTCTGCTGCAGTCCCATATGCTGATGCTTGCTTCCTGCATCAGCTACGTCATTCGCCTTTCAGCAGTATAAAAGCAACGGAGTTGGTATTGTTCTAGTTTGTGTTCTGTTATTGTTGTTCAGAAGTCAAGAATGGTTCAGCTATCTAAATCTGAAATGAGAGAGAGTCTTGAATTGAAGGCTGGCCatcctccagcagTGAAGGCTGGGGGGAAACGAGTGGCCAAGAAGAGCTATGAGGAGAGTCATGCCACCCACCATGTGAACCCAGAGAGGGAACACAAGGTTCCCAAACCCAGATCTGCAGCCACCTCCAGCCGAATGCAGCTAGTGAGTGTCTTGATGTCAGGGACACTTGACAAGTTGGGACATGACTTCCCAGAGACCCCAGTAAGTGTGAAACACAGCAGACTCAGACCTGCTTTGGAGAAGGCACACTCGCCAGCTTTCAAGTCTACCTTCTGCATCCAGCAACCGAAAAAGTTCTGAAGTAACACTTGTTGAAGTTGCCTGAAGGAAACATGTGATGTCAACTGTGAAAGACTAGCAGGAAGGTTTAGTTACATGCATGAGAGGACCAACATGAGAAGTCAGAAAATATTTGAATGTTTAGTGCTCTAGAATCCATTCATCTACTTTGAATTGGTTGCACTTTGTAACTGCTTTTAGGTGAGAAAGTGGGGCTTTGTCGATATGGGTGGTGTTCTGCTTACTACAAACCAGCATTTACTGTGCCTTTTTTTTATTAATGAGTGTATGCAAGTGAACTAAAACGCACATGGTGGGGATTTTGGAATTGGTATGTTGCATAAGAGGGTATAAGATGGATGTCTGACTGTTTCATCCGTGTCTGTTTCTCATAGTGAAAAGCTTAGCATTTGTTTACGgcttgaataaaaaaaaaaaaagttgcatGGCGTTAGAA
>TU2041294
CATATGCTGATGCTTGCTTCCTGCATCAGCTACGTCATTCGCCTTTCAGCAGTATAAAAGCAACGGAGTTGGTATTGTTCTAGTTTGTGTTCTGTTATTGTTGTTCAGAAGTCAAGAATGGTTCAGCTATCTAAATCTGAAATGAGAGAGAGTCTTGAATTGAAGGCTGGCCatcctccagcagTGAAGGCTGGGGGGAAACGAGTGGCCAAGAAGAGCTATGAGGAGAGTCATGCCACCCACCATGTGAACCCAGAGAGGGAACACAAGGTTCCCAAACCCAGATCTGCAGCCACCTCCAGCCGAATGCAGCTAGTGAGTGTCTTGATGTCAGGGACACTTGACAAGTTGGGACATGACTTCCCAGAGACCCCAGTAAGTGTGAAACACAGCAGACTCAGACCTGCTTTGGAGAAGGCACACTCGCCAGCTTTCAAGTCTACCTTCTGCATCCAGCAACCGAAAAAGTTCTGAAGTAACACTTGTTGAAGTTGCCTGAAGGAAACATGTGATGTCAACTGTGAAAGACTAGCAGGAAGGTTTAGTTACATGCATGAGAGGACCAACATGAGAAGTCAGAAAATATTTGAATGTTTAGTGCTCTAGAATCCATTCATCTACTTTGAATTGGTTGCACTTTGTAACTGCTTTTAGGTGAGAAAGTGGGGCTTTGTCGATATGGGTGGTGTTCTGCTTACTACAAACCAGCATTTACTGTGCCTTTTTTTTATTAATGAGTGTATGCAAGTGAACTAAAACGCACATGGTGGGGATTTTGGAATTGGTATGTTGCATAAGAGGGTATAAGATGGATGTCTGACTGTTTCATCCGTGTCTGTTTCTCATAGTGAAAAGCTTAGCATTTGTTTACGgcttgaataaaaaaaaaaaa
>TU2041295
CGGAGTTGGTATTGTTCTAGTTTGTGTTCTGTTATTGTTGTTCAGAAGTCAAGAATGGTTCAGCTATCTAAATCTGAAATGAGAGAGAGTCTTGAATTGAAGGCTGGCCatcctccagcagTGAAGGCTGGGGGGAAACGAGTGGCCAAGAAGAGCTATGAGGAGAGTCATGCCACCCACCATGTGAACCCAGAGAGGGAACACAAGGTTCCCAAACCCAGATCTGCAGCCACCTCCAGCCGAATGCAGCTAGTGAGTGTCTTGATGTCAGGGACACTTGACAAGTTGGGACATGACTTCCCAGAGACCCCAGTAAGTGTGAAACACAGCAGACTCAGACCTGCTTTGGAGAAGGCACACTCGCCAGCTTTCAAGTCTACCTTCTGCATCCAGCAACCGAAAAAGTTCTGAAGTAACACTTGTTGAAGTTGCCTGAAGGAAACATGTGATGTCAACTGTGAAAGACTAGCAGGAAGGTTTAGTTACATGCATGAGAGGACCAACATGAGAAGTCAGAAAATATTTGAATGTTTAGTGCTCTAGAATCCATTCATCTACTTTGAATTGGTTGCACTTTGTAACTGCTTTTAGGTGAGAAAGTGGGGCTTTGTCGATATGGGTGGTGTTCTGCTTACTACAAACCAGCATTTACTGTGCCTTTTTTTTATTAATGAGTGTATGCAAGTGAACTAAAACGCACATGGTGGGGATTTTGGAATTGGTATGTTGCATAAGAGGGTATAAGATGGATGTCTGACTGTTTCATCCGTGTCTGTTTCTCATAGTGAAAAGCTTAGCATTTGTTTACGgcttgaataaaaaaaaaaaa

Function

symbol description
dapl1 Predicted to enable death domain binding activity. Predicted to be involved in apoptotic signaling pathway; cellular response to amino acid starvation; and negative regulation of autophagy. Predicted to be integral component of membrane.

NR:

description
death-associated protein-like 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579151.2 False 1012 mRNA 0.43 4 17057104 17063550
TU2041294 False 892 TUCP 0.43 4 17057122 17063448
TU2041295 True 829 TUCP 0.43 4 17057122 17063385

Neighbor

gene id symbol gene type direction distance location
LOC110501509 tanc1 coding downstream 7819 16868323 ~ 17049285 (-)
LOC110501503 tank coding downstream 402960 16647894 ~ 16654144 (-)
LOC110501502 tbr1 coding downstream 430530 16621825 ~ 16626574 (-)
LOC110501500 LOC106581805 coding downstream 460430 16541255 ~ 16596674 (-)
LOC110501493 LOC106581799 coding downstream 968490 16045523 ~ 16088614 (-)
LOC110501511 pkp4 coding upstream 785 17064335 ~ 17178344 (-)
LOC110501516 LOC106586173 coding upstream 170845 17234395 ~ 17241046 (-)
LOC110501517 LOC106581816 coding upstream 178158 17241708 ~ 17253527 (-)
LOC110501523 galnt5 coding upstream 284662 17348212 ~ 17357611 (-)
LOC110502059 gpd2 coding upstream 380934 17444484 ~ 17486216 (-)
G1782851 NA non-coding downstream 173928 16851497 ~ 16883176 (-)
G1782818 NA non-coding downstream 240045 16816427 ~ 16817059 (-)
G1782669 NA non-coding downstream 311772 16730678 ~ 16745332 (-)
G1782671 rbms1 non-coding downstream 332623 16720314 ~ 16724481 (-)
G1782722 NA non-coding downstream 378216 16678539 ~ 16678888 (-)
G1783003 NA non-coding upstream 105995 17169545 ~ 17169748 (-)
G1783035 NA non-coding upstream 166211 17229761 ~ 17231359 (-)
G1783036 NA non-coding upstream 167965 17231515 ~ 17232043 (-)
G1783045 NA non-coding upstream 191313 17254863 ~ 17255068 (-)
b3galt1b LOC106581793 other downstream 1231890 15684423 ~ 15825221 (-)
G1781137 lrp2 other downstream 1488570 15567503 ~ 15568534 (-)
G1778224 NA other downstream 3726609 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 3884125 13168780 ~ 13172979 (-)
LOC110501411 LOC106581904 other downstream 4432410 12620582 ~ 12624860 (-)
G1783895 LOC106581829 other upstream 805979 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 2112017 19175567 ~ 19179266 (-)
G1785753 NA other upstream 2257638 19321188 ~ 19321859 (-)
znf142 znf142 other upstream 2592732 19655763 ~ 19666201 (-)
G1786832 LOC100136012 other upstream 3282149 20345699 ~ 20346014 (-)

Expression


Co-expression Network