LOC110502062


Basic Information

Item Value
gene id LOC110502062
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 18987023 ~ 18988418 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110502062
ATGTCAAAGTCGGATTTCCCTATAGCGTATGAAGGTGTACTACATGGCCCCAGGCATGGGAACTACCCACAGCCCCGACCAGGATACGGGTTACCTGCACCCCAACCACCACCATCCGATGGACCATACCCAGCTCAGTCCTCAGCTCAATACCCAGGACAAGCAGGGTACCATCTGGGCTACCCTCCATCCAGGAGGCCCTATTCCATTCCTCTAGGGAATGCCCACCTCCAACCCAGTGGAATATGATGAATTTGCATATTCTACTGCATGGGAAAGCACTTCTATTCGAGATGCATTCATCCGAAAAGTATATATTTTGGCGGCTCAGCTCATCGTCACTGTATCAATTGTGGCTGTTAACATTTGTGGAAGTGAAGTACGTGTTTTTGTCATTAAAAACCCAGTTGTGTATtggacatcctACCATTTTTTTGTTGTCACCTACTGTATTCTTGTCTGCTGCAAAGGGCCAAGGAGGCGCTTTCCTTTGAACTTTGTGCTGGCCATTTTTGTCATGGCAGGAACAATATCAAGTTACTATGACACAAAAGCAGTGTTTCTAACCGATGGAATAACAACAATTGTGTGTATAATTGTCACTATCTTCTGCATTCAAACTAAGGTACATGTTGTAAAAACCCTGCCTCTTTAG

Function

NR:

description
Transmembrane BAX inhibitor motif-containing protein 1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110502062 True 655 mRNA 0.45 8 18987023 18988418

Neighbor

gene id symbol gene type direction distance location
LOC110502061 LOC106586148 coding upstream 35355 18939954 ~ 18951668 (+)
LOC110501537 LOC106581838 coding upstream 377495 18596378 ~ 18609528 (+)
LOC110501535 LOC106581833 coding upstream 576513 18406709 ~ 18410510 (+)
LOC110501534 cryba2 coding upstream 582469 18401881 ~ 18404554 (+)
LOC110501533 LOC106581832 coding upstream 591583 18391837 ~ 18395440 (+)
stat4 stat4 coding downstream 93270 19081688 ~ 19115216 (+)
stat1b LOC106586142 coding downstream 145316 19133734 ~ 19173341 (+)
LOC110501548 LOC106586143 coding downstream 197658 19186076 ~ 19197714 (+)
LOC110501549 LOC106581842 coding downstream 211721 19200139 ~ 19213143 (+)
LOC110501551 wdr75 coding downstream 241610 19230028 ~ 19256910 (+)
G1785250 NA non-coding upstream 1990 18984807 ~ 18985033 (+)
G1785242 NA non-coding upstream 6930 18979893 ~ 18980093 (+)
G1784606 NA non-coding upstream 32771 18953298 ~ 18954252 (+)
G1784604 NA non-coding upstream 36500 18950156 ~ 18950523 (+)
G1784602 NA non-coding upstream 41481 18945336 ~ 18945542 (+)
G1785257 NA non-coding downstream 678 18989096 ~ 18989796 (+)
G1785312 NA non-coding downstream 58400 19046818 ~ 19047236 (+)
G1785317 NA non-coding downstream 67905 19056323 ~ 19056541 (+)
G1785320 NA non-coding downstream 70981 19059399 ~ 19059670 (+)
G1785321 NA non-coding downstream 71893 19060311 ~ 19060521 (+)
G1784476 asic4 other upstream 219883 18766319 ~ 18767140 (+)
kalrna LOC106581831 other upstream 764297 18101519 ~ 18386130 (+)
G1783691 LOC106586162 other upstream 1075797 17909900 ~ 17911226 (+)
G1783622 NA other upstream 1244588 17741757 ~ 17742435 (+)
G1783087 NA other upstream 1690664 17295953 ~ 17296359 (+)
ybey ybey other downstream 582162 19570580 ~ 19572946 (+)
LOC110501568 cnot9 other downstream 628577 19603742 ~ 19627954 (+)
G1785947 znf142 other downstream 672691 19661109 ~ 19661926 (+)
asb1 asb1 other downstream 1292595 20269646 ~ 20281952 (+)

Expression


Co-expression Network