mstnb (LOC100135919)


Basic Information

Item Value
gene id mstnb
gene name LOC100135919
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 19439196 ~ 19442706 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124282.1
ACCTATCAGTGTAGAGCCTGATTTCAAACAGAGGCAACTCTGTAGTCCGCCTTCACATATGCCAATACATATTACATTTGGGATTCAATTTTTATAGCAAACTCCGCACCTTAGATAATGCATCTGACGCAGGTTCTGATTTATCTCAGTTTCATGGTTGCTTTCGGTCCAGTGGGTCTTGGTGATCAAACCGCGCACCACCAGCCCCCTGCCACGGATGACGGCGAGCAGTGCTCAACATGCGAGGTCCGACAGCAGATCAAAAACATGAGATTACACGCCATCAAGTCCCAAATTCTTAGCAAACTGCGACTCAAGCAAGCTCCCAATATCAGCAGAGATGTTGTCAAGCAGCTCCTGCCTAAGGCACCACCTTTGCAGCAACTTCTTGACCAGTACGATGTTCTTGGAGATGACAATAAGGATGGACTTATGGAAGAAGATGATGAACATGCCATCACAGAAACAATCATGACAATGGCCACTGAACCCGAATCCATCGTCCAAGTCGATCGGAAACCCAAGTGTTGCTTATTCTCCTTCAGTTCGAAGATTCAGGTGAACCGCATAGTTCATGCGCAGTTATGGGTGCACCTTTTGCCAGCTGACGAAGTCACCACCGTGTTTCTGCAAATCTCCCGCCTGATGCCTGTCACGGACGGGGGCAGGCACATAGGTATCCGGTCTCTAAAGATCGACGTGAATGCAGGAGTCAGCTCTTGGCAAAGTATCGACGTGAAACAAGTGCTGTCCGTATGGCTGCGGCAGCCGGAGACGAATTGGGGGATCGAGATTAATGCGTTCGACTCGAAGGGAAATGATCTGGCGGTTACCTCAGCAGAAGCGGGAGAAGGACTGCAACCCTTCATGGAGGTGACGATTTCAGAGGGCCCAAAGCGCTTCAGGAGAGACTCGGGCCTGGACTGTGACGAGAACTCCCCCGAGTCCCGCTGTTGCCGCTACCCGCTCACGGTAGACTTTGAAGACTTTGGCTGGGACTGGATTATTGCCCCCAAGCGCTACAAGGCCAACTACTGCTCTGGTGAGTGCGAGTACATGCACCTGCAGAAGTACCCCCACACCCACCTGGTGAACAAGGCTAACCCTCGCGGCACTGCCGGGCCCTGTTGCACCCCCACCAAGATGTCCCCCATCAACATGCTCTACTTCAACCGCAAAGAGCAGATCATCTACGGCAAGATCCCCTCCATGGTGGTGGACCGATGCGGCTGCTCGTGAGCGAGAGCTCTGCCGGTGAGGGGGAGGGGCTCAGCCAGGGTCTCCCCCCTGGACTTTGGGACAGATCCATCCACCACTACCAGTGCTTTCTGCAGAACACGGTGCAATAGAGCCAGAATAGCGGCTAAAGAAATGCCCGTTCATTCGCTGAGCAGCGCTTCCATCACGGACATGTCT

Function

NR:

description
myostatin 1 precursor

GO:

id name namespace
GO:0040007 growth biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K05497 MSTN, GDF8; growth differentiation factor 8

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124282.1 True 1416 mRNA 0.53 3 19439196 19442706

Neighbor

gene id symbol gene type direction distance location
ormdl1 ormdl1 coding downstream 93356 19338752 ~ 19345840 (-)
osgepl1 osgepl1 coding downstream 108550 19323005 ~ 19330646 (-)
zgc:136439 LOC106581848 coding downstream 125468 19311289 ~ 19313728 (-)
slc40a1 slc40a1 coding downstream 159684 19260461 ~ 19279512 (-)
LOC110501550 LOC106581842 coding downstream 209328 19217104 ~ 19229868 (-)
LOC110501563 NA coding upstream 80355 19523061 ~ 19525499 (-)
lss lss coding upstream 87692 19530398 ~ 19544185 (-)
LOC110501564 mcm3ap coding upstream 101652 19544358 ~ 19570630 (-)
LOC110501567 usp37 coding upstream 129739 19572445 ~ 19603558 (-)
znf142 znf142 coding upstream 213057 19655763 ~ 19666201 (-)
G1785752 ankar non-coding downstream 119357 19319492 ~ 19319839 (-)
G1785748 NA non-coding downstream 147608 19291367 ~ 19291588 (-)
G1785745 NA non-coding downstream 154817 19284031 ~ 19284379 (-)
G1785744 NA non-coding downstream 155218 19283131 ~ 19283978 (-)
G1785742 NA non-coding downstream 156538 19281007 ~ 19282658 (-)
G1785857 NA non-coding upstream 43422 19486128 ~ 19486335 (-)
G1785861 NA non-coding upstream 47813 19490519 ~ 19490733 (-)
G1786379 NA non-coding upstream 243784 19686490 ~ 19687169 (-)
G1786380 NA non-coding upstream 245059 19687765 ~ 19688406 (-)
G1786566 NA non-coding upstream 531614 19974320 ~ 19974561 (-)
G1785753 NA other downstream 117337 19321188 ~ 19321859 (-)
LOC110501547 LOC106586143 other downstream 260012 19175567 ~ 19179266 (-)
G1783895 LOC106581829 other downstream 1535245 17869529 ~ 17903951 (-)
LOC110501514 dapl1 other downstream 2375748 17057104 ~ 17063550 (-)
b3galt1b LOC106581793 other downstream 3613982 15684423 ~ 15825221 (-)
G1786832 LOC100136012 other upstream 902993 20345699 ~ 20346014 (-)
G1787166 NA other upstream 947810 20390516 ~ 20455983 (-)
LOC110501594 LOC106581696 other upstream 2348050 21788428 ~ 21913721 (-)
G1789581 NA other upstream 2975424 22418130 ~ 22419498 (-)

Expression


Co-expression Network