zgc:66484 (LOC106581857)


Basic Information

Item Value
gene id zgc:66484
gene name LOC106581857
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 19734287 ~ 19743949 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579241.2
AGAGTTGTAGACACACCCAAGCAGTTTATAAAGACTTTAGTCTTCTTCTTCCTACATAACAGTATTCTCTCTTGAAATCTGAGTCCTTGAGTTTCCCAGCCCAGCCTGCCTAGGCTATATGCTATCGAAATCAACACAGGAGACAGCTCACTGCAGAATGAGTCCACACAGTGCTGCCAGAGTGGTGGTGGTTGGTGCTGGTCTATCAGGCTTATCTGCAGCTTCCACCCTGGTGAAAGCTGGATTTCAGCACATCCAAGTCCTGGAGGCTATGGGCAGGCCCGGAGGCCGGGTCTACACCACAAAACCCTTTGGCCAGAATGTAATTGAGCTGGGGGCCAACTGGATCCACGGTCAGGAGGCCAACCCTCTCTTCCTGCTAGCCCAGGAGCAGGGCCTGCTGCTGGAGGAGAGAGGCTCAGCCAGCATCATGTGCCTGCCAGGCTCTGTCACCCCTAGGGACTACTTCTTCCGGGAAAGCAGGCGACAGCTTCCGGTGGACGAGGTGGAGCAGGTGTGTTCCTTTTTCAGCGGGCTCACCTCCAGGGCCTTCGAATCAGAGTTGGAGCCTAGGCACAGCAGTCAGAGCCTGGGGGGCTACCTGGACGAGGAGTTCGCCCAGTCACCCCTGGCGGCCTTGGAGGACGGCCCGAGGGTATTTGAGTGGTGCAAGAGGAGCGAATGCACGGATGAGGCCAGCTCCTCCCTCTATGAGGTGTCTGCCTCGCAGCTGGGTCACTATGTGGCCTTGGAGGGGGGCTTCTTCAATTCTCTGGGCCCCGGAGGCTATCAGGCCCTAGCAGACACCCTCTTGGACAACCTTCCGCCTGGAGCCTTGCTGTGTGACAGGCCGGTACACAGCATCCACTGGGCCCTGCAGGAGGAGAAGAACCACACCCGTCCAGTCAGAGTGCTGTGCCAGGGGGGCCAGTGCTTCATGGCAGACCACGTCATCGTGACCGTCCCTTTAGGCTTCCTGAAAGAGAATGCAGTGGCCATGTTTGAGCCAGCCCTCCCCAAGTCCAAGGCCGACGCCATTGAGAGACTGGGCTTTGGCACGGTGGACAAGATTTACCTGCGGTTCGAGGACAGGTTCTGGCCCCACGATTGTGCCGGGATCCAGCTGGTGTGGGACGCTGGGCCTGAGGATGAGGAGGTATACCAGCACTCTCAGTCAGAGGGTGGGGCCTGGAGAGACATGTGGTATAAGAAGATCTGTGGCTTTGACACGGTGGCCCGCCATCCCACAGTCCTCTGCGGCTGGATCACAGGCCGGGAGGCCCAACACATGGAGAGCCTGGACGAAAAGATAGTGGGAGaggtgtgtgtaagAATGCTTAGGTCCTTCACTGGCTGGTCAGTACCAGAGCCAGCCCAGGTCCTGATGTCCAAGTGGGGGAGTGAGCGTTATGTCCGTGGGTCATATACGTACCCCCCTCCAGGAGTGGACGCTGTGAGGGAACACACAGCCCTGGCAGCCCCTCTTCCTTTGCCCTGTGAGGCTGGAAACTCACAGGCAAAGCCTCTTCAGGTGCTGTTTGCTGGCGAGGCCACCCACGTGAACTTCTACACCACCACTCATGGGGCCTACATGACGGGCATCAGAGAAGCACAAAGACTCATTGACCATTACTCCGATAGTGAGCCCCGATTCCTCTAACGAGTGATACACAAAACGCCTCATTTACTAAGAACTCTAGCTTGTCAGCAGGTTACTAATACTGATGAAATGACCATGAATTGTTTTCGATATCTAGTAAGCAGCTGCTTGAAATCATTAGCCACTATGAACGGCGCCACTATGGATTCAGCTGTGGACTTTGGTCACCATCATGCGATTGTGTTAAAGTTGAAGTGCTTTGTAATTGTAGTTGTATGTCACAGTATCAGTTCTTTCTTTTAGGGATTGGTTAGCATACTAAGATTGCCTGACTCATAATGTAATGACCTTTTTCCTTTTTTCGTGTAACTTGAAACTGTAGCTGTAATTTTAAATGacaccttttttgttgttgacaaatacattttttgtggGATGAATATATTAATTGGATCCCAATTAGATACGCCACACTGCCATTTGTTTTCACATTAAAATTTGATGCACATATCAGTATGATTCATTATGATTTGCTGAAGGTATTGAAAACACAAACTGGGGAATAGGGTCTTCTTTATTGACTGTCATTGTAGCATTGCAAATGAAGGATCTTCATAGAGATGTATTCATCTGCTTATCCAACATAGCAAAAAACGAAATACCCCAATAGACATCTCCATTTGACAGTCATAATTTCATTGATATGTTACACCTCAACATGTATATTATGAAACACAAAGTACCTACTAATAAACTAAGCCCTTGTGGTCCTCTGAAGATTGCAAA
>XM_021579243.2
tgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtctCATCTTCAAtatccttgctgatggaaggaggttttcactcaaattaATTTCCCACCACCATTTTCAGGATGTTCTGACAACTTCCGGATGTTGCACACCTCGAGACAGCTCACTGCAGAATGAGTCCACACAGTGCTGCCAGAGTGGTGGTGGTTGGTGCTGGTCTATCAGGCTTATCTGCAGCTTCCACCCTGGTGAAAGCTGGATTTCAGCACATCCAAGTCCTGGAGGCTATGGGCAGGCCCGGAGGCCGGGTCTACACCACAAAACCCTTTGGCCAGAATGTAATTGAGCTGGGGGCCAACTGGATCCACGGTCAGGAGGCCAACCCTCTCTTCCTGCTAGCCCAGGAGCAGGGCCTGCTGCTGGAGGAGAGAGGCTCAGCCAGCATCATGTGCCTGCCAGGCTCTGTCACCCCTAGGGACTACTTCTTCCGGGAAAGCAGGCGACAGCTTCCGGTGGACGAGGTGGAGCAGGTGTGTTCCTTTTTCAGCGGGCTCACCTCCAGGGCCTTCGAATCAGAGTTGGAGCCTAGGCACAGCAGTCAGAGCCTGGGGGGCTACCTGGACGAGGAGTTCGCCCAGTCACCCCTGGCGGCCTTGGAGGACGGCCCGAGGGTATTTGAGTGGTGCAAGAGGAGCGAATGCACGGATGAGGCCAGCTCCTCCCTCTATGAGGTGTCTGCCTCGCAGCTGGGTCACTATGTGGCCTTGGAGGGGGGCTTCTTCAATTCTCTGGGCCCCGGAGGCTATCAGGCCCTAGCAGACACCCTCTTGGACAACCTTCCGCCTGGAGCCTTGCTGTGTGACAGGCCGGTACACAGCATCCACTGGGCCCTGCAGGAGGAGAAGAACCACACCCGTCCAGTCAGAGTGCTGTGCCAGGGGGGCCAGTGCTTCATGGCAGACCACGTCATCGTGACCGTCCCTTTAGGCTTCCTGAAAGAGAATGCAGTGGCCATGTTTGAGCCAGCCCTCCCCAAGTCCAAGGCCGACGCCATTGAGAGACTGGGCTTTGGCACGGTGGACAAGATTTACCTGCGGTTCGAGGACAGGTTCTGGCCCCACGATTGTGCCGGGATCCAGCTGGTGTGGGACGCTGGGCCTGAGGATGAGGAGGTATACCAGCACTCTCAGTCAGAGGGTGGGGCCTGGAGAGACATGTGGTATAAGAAGATCTGTGGCTTTGACACGGTGGCCCGCCATCCCACAGTCCTCTGCGGCTGGATCACAGGCCGGGAGGCCCAACACATGGAGAGCCTGGACGAAAAGATAGTGGGAGaggtgtgtgtaagAATGCTTAGGTCCTTCACTGGCTGGTCAGTACCAGAGCCAGCCCAGGTCCTGATGTCCAAGTGGGGGAGTGAGCGTTATGTCCGTGGGTCATATACGTACCCCCCTCCAGGAGTGGACGCTGTGAGGGAACACACAGCCCTGGCAGCCCCTCTTCCTTTGCCCTGTGAGGCTGGAAACTCACAGGCAAAGCCTCTTCAGGTGCTGTTTGCTGGCGAGGCCACCCACGTGAACTTCTACACCACCACTCATGGGGCCTACATGACGGGCATCAGAGAAGCACAAAGACTCATTGACCATTACTCCGATAGTGAGCCCCGATTCCTCTAACGAGTGATACACAAAACGCCTCATTTACTAAGAACTCTAGCTTGTCAGCAGGTTACTAATACTGATGAAATGACCATGAATTGTTTTCGATATCTAGTAAGCAGCTGCTTGAAATCATTAGCCACTATGAACGGCGCCACTATGGATTCAGCTGTGGACTTTGGTCACCATCATGCGATTGTGTTAAAGTTGAAGTGCTTTGTAATTGTAGTTGTATGTCACAGTATCAGTTCTTTCTTTTAGGGATTGGTTAGCATACTAAGATTGCCTGACTCATAATGTAATGACCTTTTTCCTTTTTTCGTGTAACTTGAAACTGTAGCTGTAATTTTAAATGacaccttttttgttgttgacaaatacattttttgtggGATGAATATATTAATTGGATCCCAATTAGATACGCCACACTGCCATTTGTTTTCACATTAAAATTTGATGCACATATCAGTATGATTCATTATGATTTGCTGAAGGTATTGAAAACACAAACTGGGGAATAGGGTCTTCTTTATTGACTGTCATTGTAGCATTGCAAATGAAGGATCTTCATAGAGATGTATTCATCTGCTTATCCAACATAGCAAAAAACGAAATACCCCAATAGACATCTCCATTTGACAGTCATAATTTCATTGATATGTTACACCTCAACATGTATATTATGAAACACAAAGTACCTACTAATAAACTAAGCCCTTGTGGTCCTCTGAAGATTGCAAA
>XM_036958939.1
GTTGCACACCTCGTGAGTCTTGTTTACCACTGGCTGAACATGCACCACAACATCAGGAACTAGCATTAGCCACATACATGGTGGTGGACATGTGTGTTTTATTAACAGTATAGTACGCAAATTTCCCATATTTTGTTCCATAGACGAGTTATTAAATCTAGTTAAGGAGGAAACCGATGCCTTCGCAGCCAGAATAAAGGATGCTTTATGTATGTCAGTCCATGGAGGGGACACGAGTGTATTACCGTCGAGGCTGACAGCGTTGGCACCTAGAGGTAATACGACATCAGGAAGAACTATGCCCACTAGGAGTCTCGGCGCTAGGAGACAGCTCACTGCAGAATGAGTCCACACAGTGCTGCCAGAGTGGTGGTGGTTGGTGCTGGTCTATCAGGCTTATCTGCAGCTTCCACCCTGGTGAAAGCTGGATTTCAGCACATCCAAGTCCTGGAGGCTATGGGCAGGCCCGGAGGCCGGGTCTACACCACAAAACCCTTTGGCCAGAATGTAATTGAGCTGGGGGCCAACTGGATCCACGGTCAGGAGGCCAACCCTCTCTTCCTGCTAGCCCAGGAGCAGGGCCTGCTGCTGGAGGAGAGAGGCTCAGCCAGCATCATGTGCCTGCCAGGCTCTGTCACCCCTAGGGACTACTTCTTCCGGGAAAGCAGGCGACAGCTTCCGGTGGACGAGGTGGAGCAGGTGTGTTCCTTTTTCAGCGGGCTCACCTCCAGGGCCTTCGAATCAGAGTTGGAGCCTAGGCACAGCAGTCAGAGCCTGGGGGGCTACCTGGACGAGGAGTTCGCCCAGTCACCCCTGGCGGCCTTGGAGGACGGCCCGAGGGTATTTGAGTGGTGCAAGAGGAGCGAATGCACGGATGAGGCCAGCTCCTCCCTCTATGAGGTGTCTGCCTCGCAGCTGGGTCACTATGTGGCCTTGGAGGGGGGCTTCTTCAATTCTCTGGGCCCCGGAGGCTATCAGGCCCTAGCAGACACCCTCTTGGACAACCTTCCGCCTGGAGCCTTGCTGTGTGACAGGCCGGTACACAGCATCCACTGGGCCCTGCAGGAGGAGAAGAACCACACCCGTCCAGTCAGAGTGCTGTGCCAGGGGGGCCAGTGCTTCATGGCAGACCACGTCATCGTGACCGTCCCTTTAGGCTTCCTGAAAGAGAATGCAGTGGCCATGTTTGAGCCAGCCCTCCCCAAGTCCAAGGCCGACGCCATTGAGAGACTGGGCTTTGGCACGGTGGACAAGATTTACCTGCGGTTCGAGGACAGGTTCTGGCCCCACGATTGTGCCGGGATCCAGCTGGTGTGGGACGCTGGGCCTGAGGATGAGGAGGTATACCAGCACTCTCAGTCAGAGGGTGGGGCCTGGAGAGACATGTGGTATAAGAAGATCTGTGGCTTTGACACGGTGGCCCGCCATCCCACAGTCCTCTGCGGCTGGATCACAGGCCGGGAGGCCCAACACATGGAGAGCCTGGACGAAAAGATAGTGGGAGaggtgtgtgtaagAATGCTTAGGTCCTTCACTGGCTGGTCAGTACCAGAGCCAGCCCAGGTCCTGATGTCCAAGTGGGGGAGTGAGCGTTATGTCCGTGGGTCATATACGTACCCCCCTCCAGGAGTGGACGCTGTGAGGGAACACACAGCCCTGGCAGCCCCTCTTCCTTTGCCCTGTGAGGCTGGAAACTCACAGGCAAAGCCTCTTCAGGTGCTGTTTGCTGGCGAGGCCACCCACGTGAACTTCTACACCACCACTCATGGGGCCTACATGACGGGCATCAGAGAAGCACAAAGACTCATTGACCATTACTCCGATAGTGAGCCCCGATTCCTCTAACGAGTGATACACAAAACGCCTCATTTACTAAGAACTCTAGCTTGTCAGCAGGTTACTAATACTGATGAAATGACCATGAATTGTTTTCGATATCTAGTAAGCAGCTGCTTGAAATCATTAGCCACTATGAACGGCGCCACTATGGATTCAGCTGTGGACTTTGGTCACCATCATGCGATTGTGTTAAAGTTGAAGTGCTTTGTAATTGTAGTTGTATGTCACAGTATCAGTTCTTTCTTTTAGGGATTGGTTAGCATACTAAGATTGCCTGACTCATAATGTAATGACCTTTTTCCTTTTTTCGTGTAACTTGAAACTGTAGCTGTAATTTTAAATGacaccttttttgttgttgacaaatacattttttgtggGATGAATATATTAATTGGATCCCAATTAGATACGCCACACTGCCATTTGTTTTCACATTAAAATTTGATGCACATATCAGTATGATTCATTATGATTTGCTGAAGGTATTGAAAACACAAACTGGGGAATAGGGTCTTCTTTATTGACTGTCATTGTAGCATTGCAAATGAAGGATCTTCATAGAGATGTATTCATCTGCTTATCCAACATAGCAAAAAACGAAATACCCCAATAGACATCTCCATTTGACAGTCATAATTTCATTGATATGTTACACCTCAACATGTATATTATGAAACACAAAGTACCTACTAATAAACTAAGCCCTTGTGGTCCTCTGAAGATTGCAAA
>XM_021579242.2
CTTGTTTACCACTGGCTGAACATGCACCACAACATCAGGAACTAGCATTAGCCACATACATGGTGGTGGACATGTGTGTTTTATTAACAGTATAGTACGCAAATTTCCCATATTTTGTTCCATAGACGAGTTATTAAATCTAGTTAAGGAGGAAACCGATGCCTTCGCAGCCAGAATAAAGGATGCTTTATGTATGTCAGTCCATGGAGGGGACACGAGTGTATTACCGTCGAGGCTGACAGCGTTGGCACCTAGAGGAGACAGCTCACTGCAGAATGAGTCCACACAGTGCTGCCAGAGTGGTGGTGGTTGGTGCTGGTCTATCAGGCTTATCTGCAGCTTCCACCCTGGTGAAAGCTGGATTTCAGCACATCCAAGTCCTGGAGGCTATGGGCAGGCCCGGAGGCCGGGTCTACACCACAAAACCCTTTGGCCAGAATGTAATTGAGCTGGGGGCCAACTGGATCCACGGTCAGGAGGCCAACCCTCTCTTCCTGCTAGCCCAGGAGCAGGGCCTGCTGCTGGAGGAGAGAGGCTCAGCCAGCATCATGTGCCTGCCAGGCTCTGTCACCCCTAGGGACTACTTCTTCCGGGAAAGCAGGCGACAGCTTCCGGTGGACGAGGTGGAGCAGGTGTGTTCCTTTTTCAGCGGGCTCACCTCCAGGGCCTTCGAATCAGAGTTGGAGCCTAGGCACAGCAGTCAGAGCCTGGGGGGCTACCTGGACGAGGAGTTCGCCCAGTCACCCCTGGCGGCCTTGGAGGACGGCCCGAGGGTATTTGAGTGGTGCAAGAGGAGCGAATGCACGGATGAGGCCAGCTCCTCCCTCTATGAGGTGTCTGCCTCGCAGCTGGGTCACTATGTGGCCTTGGAGGGGGGCTTCTTCAATTCTCTGGGCCCCGGAGGCTATCAGGCCCTAGCAGACACCCTCTTGGACAACCTTCCGCCTGGAGCCTTGCTGTGTGACAGGCCGGTACACAGCATCCACTGGGCCCTGCAGGAGGAGAAGAACCACACCCGTCCAGTCAGAGTGCTGTGCCAGGGGGGCCAGTGCTTCATGGCAGACCACGTCATCGTGACCGTCCCTTTAGGCTTCCTGAAAGAGAATGCAGTGGCCATGTTTGAGCCAGCCCTCCCCAAGTCCAAGGCCGACGCCATTGAGAGACTGGGCTTTGGCACGGTGGACAAGATTTACCTGCGGTTCGAGGACAGGTTCTGGCCCCACGATTGTGCCGGGATCCAGCTGGTGTGGGACGCTGGGCCTGAGGATGAGGAGGTATACCAGCACTCTCAGTCAGAGGGTGGGGCCTGGAGAGACATGTGGTATAAGAAGATCTGTGGCTTTGACACGGTGGCCCGCCATCCCACAGTCCTCTGCGGCTGGATCACAGGCCGGGAGGCCCAACACATGGAGAGCCTGGACGAAAAGATAGTGGGAGaggtgtgtgtaagAATGCTTAGGTCCTTCACTGGCTGGTCAGTACCAGAGCCAGCCCAGGTCCTGATGTCCAAGTGGGGGAGTGAGCGTTATGTCCGTGGGTCATATACGTACCCCCCTCCAGGAGTGGACGCTGTGAGGGAACACACAGCCCTGGCAGCCCCTCTTCCTTTGCCCTGTGAGGCTGGAAACTCACAGGCAAAGCCTCTTCAGGTGCTGTTTGCTGGCGAGGCCACCCACGTGAACTTCTACACCACCACTCATGGGGCCTACATGACGGGCATCAGAGAAGCACAAAGACTCATTGACCATTACTCCGATAGTGAGCCCCGATTCCTCTAACGAGTGATACACAAAACGCCTCATTTACTAAGAACTCTAGCTTGTCAGCAGGTTACTAATACTGATGAAATGACCATGAATTGTTTTCGATATCTAGTAAGCAGCTGCTTGAAATCATTAGCCACTATGAACGGCGCCACTATGGATTCAGCTGTGGACTTTGGTCACCATCATGCGATTGTGTTAAAGTTGAAGTGCTTTGTAATTGTAGTTGTATGTCACAGTATCAGTTCTTTCTTTTAGGGATTGGTTAGCATACTAAGATTGCCTGACTCATAATGTAATGACCTTTTTCCTTTTTTCGTGTAACTTGAAACTGTAGCTGTAATTTTAAATGacaccttttttgttgttgacaaatacattttttgtggGATGAATATATTAATTGGATCCCAATTAGATACGCCACACTGCCATTTGTTTTCACATTAAAATTTGATGCACATATCAGTATGATTCATTATGATTTGCTGAAGGTATTGAAAACACAAACTGGGGAATAGGGTCTTCTTTATTGACTGTCATTGTAGCATTGCAAATGAAGGATCTTCATAGAGATGTATTCATCTGCTTATCCAACATAGCAAAAAACGAAATACCCCAATAGACATCTCCATTTGACAGTCATAATTTCATTGATATGTTACACCTCAACATGTATATTATGAAACACAAAGTACCTACTAATAAACTAAGCCCTTGTGGTCCTCTGAAGATTGCAAA

Function

NR:

description
spermine oxidase-like isoform X1

GO: NA

KEGG:

id description
K12259 SMOX, PAO5; spermine oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579241.2 False 2386 mRNA 0.51 4 19734287 19743949
XM_021579243.2 False 2402 mRNA 0.51 4 19738831 19743949
XM_036958939.1 False 2571 mRNA 0.51 4 19738974 19743949
XM_021579242.2 True 2504 mRNA 0.51 4 19738992 19743949

Neighbor

gene id symbol gene type direction distance location
LOC110501573 LOC106586130 coding upstream 7419 19689016 ~ 19726868 (+)
LOC110501572 LOC106581856 coding upstream 48537 19679303 ~ 19686002 (+)
plcd4b plcd4 coding upstream 78529 19630160 ~ 19655758 (+)
LOC110501568 cnot9 coding upstream 106333 19603742 ~ 19627954 (+)
ybey ybey coding upstream 161341 19570580 ~ 19572946 (+)
LOC110502116 NA coding downstream 128198 19872147 ~ 19872697 (+)
adarb1b LOC106581860 coding downstream 253890 19997839 ~ 20175660 (+)
traf3ip1 traf3ip1 coding downstream 462453 20206402 ~ 20259273 (+)
asb1 asb1 coding downstream 525697 20269646 ~ 20281952 (+)
LOC110502064 LOC106581735 coding downstream 594179 20338128 ~ 20343956 (+)
G1785961 NA non-coding upstream 60453 19673600 ~ 19673834 (+)
G1785953 NA non-coding upstream 68118 19665910 ~ 19666169 (+)
G1785952 NA non-coding upstream 68627 19665448 ~ 19665660 (+)
G1785951 NA non-coding upstream 69069 19665000 ~ 19665218 (+)
G1786002 NA non-coding downstream 21689 19765638 ~ 19765914 (+)
G1786006 NA non-coding downstream 24080 19768029 ~ 19768416 (+)
G1786007 NA non-coding downstream 24524 19768473 ~ 19768832 (+)
G1786167 NA non-coding downstream 252731 19996680 ~ 19997210 (+)
G1786280 NA non-coding downstream 439950 20183899 ~ 20184166 (+)
G1785947 znf142 other upstream 72361 19661109 ~ 19661926 (+)
LOC110501548 LOC106586143 other upstream 536573 19186076 ~ 19197714 (+)
G1784476 asic4 other upstream 967147 18766319 ~ 18767140 (+)
G1786330 NA other downstream 539232 20283181 ~ 20284571 (+)
G1787719 NA other downstream 1390316 21134265 ~ 21136477 (+)
G1788811 LOC106581691 other downstream 2251415 21995364 ~ 21996093 (+)
G1788815 LOC100136012 other downstream 2254524 21998473 ~ 21999623 (+)

Expression


Co-expression Network