Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502116 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 19872147 ~ 19872697 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002470296.2 | True | 457 | mRNA | 0.41 | 2 | 19872147 | 19872697 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:66484 | LOC106581857 | coding | upstream | 128198 | 19734287 ~ 19743949 (+) |
| LOC110501573 | LOC106586130 | coding | upstream | 145279 | 19689016 ~ 19726868 (+) |
| LOC110501572 | LOC106581856 | coding | upstream | 186397 | 19679303 ~ 19686002 (+) |
| plcd4b | plcd4 | coding | upstream | 216389 | 19630160 ~ 19655758 (+) |
| LOC110501568 | cnot9 | coding | upstream | 244193 | 19603742 ~ 19627954 (+) |
| adarb1b | LOC106581860 | coding | downstream | 125142 | 19997839 ~ 20175660 (+) |
| traf3ip1 | traf3ip1 | coding | downstream | 333705 | 20206402 ~ 20259273 (+) |
| asb1 | asb1 | coding | downstream | 396949 | 20269646 ~ 20281952 (+) |
| LOC110502064 | LOC106581735 | coding | downstream | 465431 | 20338128 ~ 20343956 (+) |
| twist2 | twist2 | coding | downstream | 486943 | 20359640 ~ 20365532 (+) |
| G1786007 | NA | non-coding | upstream | 103315 | 19768473 ~ 19768832 (+) |
| G1786006 | NA | non-coding | upstream | 103731 | 19768029 ~ 19768416 (+) |
| G1786002 | NA | non-coding | upstream | 106233 | 19765638 ~ 19765914 (+) |
| G1785961 | NA | non-coding | upstream | 198313 | 19673600 ~ 19673834 (+) |
| G1786167 | NA | non-coding | downstream | 123983 | 19996680 ~ 19997210 (+) |
| G1786280 | NA | non-coding | downstream | 311202 | 20183899 ~ 20184166 (+) |
| G1786282 | NA | non-coding | downstream | 314886 | 20187583 ~ 20187801 (+) |
| G1786321 | NA | non-coding | downstream | 391802 | 20264499 ~ 20265113 (+) |
| G1785947 | znf142 | other | upstream | 210221 | 19661109 ~ 19661926 (+) |
| ybey | ybey | other | upstream | 299708 | 19570580 ~ 19572946 (+) |
| LOC110501548 | LOC106586143 | other | upstream | 674433 | 19186076 ~ 19197714 (+) |
| G1784476 | asic4 | other | upstream | 1105007 | 18766319 ~ 18767140 (+) |
| G1786330 | NA | other | downstream | 410484 | 20283181 ~ 20284571 (+) |
| G1787719 | NA | other | downstream | 1261568 | 21134265 ~ 21136477 (+) |
| G1788811 | LOC106581691 | other | downstream | 2122667 | 21995364 ~ 21996093 (+) |
| G1788815 | LOC100136012 | other | downstream | 2125776 | 21998473 ~ 21999623 (+) |
