Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943627 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20690516 ~ 20692314 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005038959.1 | True | 255 | mRNA | 0.51 | 3 | 20690516 | 20692314 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hdac4 | hdac4 | coding | downstream | 29538 | 20379465 ~ 20660978 (-) |
| agr1 | LOC106581734 | coding | downstream | 486652 | 20195712 ~ 20203864 (-) |
| LOC118943631 | NA | coding | downstream | 900593 | 19788794 ~ 19789923 (-) |
| LOC110501577 | LOC106581859 | coding | downstream | 902991 | 19769408 ~ 19787525 (-) |
| vil1 | vil1 | coding | downstream | 926656 | 19743720 ~ 19763860 (-) |
| LOC110501586 | LOC106581869 | coding | upstream | 38596 | 20730910 ~ 20739954 (-) |
| LOC100136257 | LOC100136257 | coding | upstream | 73598 | 20765912 ~ 20777157 (-) |
| LOC110501587 | LOC106586113 | coding | upstream | 450770 | 21143084 ~ 21447203 (-) |
| LOC110501588 | LOC106581699 | coding | upstream | 880250 | 21572564 ~ 21590999 (-) |
| LOC110501591 | LOC106581664 | coding | upstream | 1016567 | 21708881 ~ 21766231 (-) |
| G1787259 | NA | non-coding | downstream | 157517 | 20524773 ~ 20532999 (-) |
| G1787208 | NA | non-coding | downstream | 290403 | 20398852 ~ 20400113 (-) |
| G1786846 | NA | non-coding | downstream | 336439 | 20353747 ~ 20354077 (-) |
| G1786834 | NA | non-coding | downstream | 343884 | 20346146 ~ 20346632 (-) |
| G1786815 | NA | non-coding | downstream | 365581 | 20324712 ~ 20324935 (-) |
| G1787982 | NA | non-coding | upstream | 405999 | 21098313 ~ 21122358 (-) |
| G1788010 | NA | non-coding | upstream | 444229 | 21136543 ~ 21136749 (-) |
| G1788013 | NA | non-coding | upstream | 446015 | 21138329 ~ 21139127 (-) |
| G1788014 | NA | non-coding | upstream | 448744 | 21141058 ~ 21141545 (-) |
| G1788199 | NA | non-coding | upstream | 697898 | 21390212 ~ 21395471 (-) |
| G1787166 | NA | other | downstream | 234533 | 20390516 ~ 20455983 (-) |
| G1786832 | LOC100136012 | other | downstream | 344502 | 20345699 ~ 20346014 (-) |
| znf142 | znf142 | other | downstream | 1031416 | 19655763 ~ 19666201 (-) |
| G1785753 | NA | other | downstream | 1368657 | 19321188 ~ 19321859 (-) |
| LOC110501547 | LOC106586143 | other | downstream | 1511332 | 19175567 ~ 19179266 (-) |
| LOC110501594 | LOC106581696 | other | upstream | 1098442 | 21788428 ~ 21913721 (-) |
| G1789581 | NA | other | upstream | 1725816 | 22418130 ~ 22419498 (-) |
| G1790280 | NA | other | upstream | 2472167 | 23164481 ~ 23169363 (-) |
| LOC110501997 | LOC106582152 | other | upstream | 2740680 | 23368423 ~ 23460589 (-) |
| G1791405 | NA | other | upstream | 3634415 | 24326729 ~ 24327127 (-) |
