LOC110502015 (renr)


Basic Information

Item Value
gene id LOC110502015
gene name renr
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23354928 ~ 23363406 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579918.2
ATTACCAATTCATACCCATCATGCATTGCTACCATGTTCGTGACAAGCGAGTCAGTTGATTGACGTTAGAGCAAGGAGAAAGATGTCGCTGGAAAATCGCCGAaggatggaggctgtattcaCCGTAGCGCTTATCTTCTGCTCAGCTTTTACGTCAGGCGTTCAGGGGGACAGCCTCACCATATTGCAGGCCCCTGAGTATGTGTCCTTCCAAAAGGGAGACTGGCCGATATCAGGGGAGAAGATTCCCGATATGGTGGCTCTAACTATGGGTTTCTCCGTCCAGGAGgatcTCTCCTGGCCAGGCCTCCGAGCAGGTCCTTTGTTCCAGCGTCCCAGGGCCAACGTGCTGGTGGTGGTGCGGGGGGTGGACAGCCTGGCCCTGCCCCAGAGTGTGGCCTCCTACCCCCTGGAGAATCCGGTGCCCTTCACCCTGGACAGTGTGGCTGAGACGGTTCACACTCTCTTTGCTGAGGACACTCCTGTGGTGCTCCAGCTGGCCCCTAGTGAGGAGAGGCTGTACATGCTGGGAAAGGCCAACGCTGTGTTTGAGGACCTGCCTGTGACCCTGCAGCAGATTCGTGCTCGTCTCTCCCAGGATGGCTCTGTGCTCGCCTCCCTGCCACTCAACTCCCTCAGCCGCAATGCTGAGgctgaTCTGCTCTTCCTGTCTGAGGTCCAGGTTCTACATGACATCACTGCCCTGCTGCAGAGACACAGGCACCTGGCCAAGGACCACTCCCCTGACCTGTACTCCCTGGAGCTGTCTGGCCTGGAGGAGCTGGGCCGCCGCTACGGACAGGACTCCTCTCAGTACCAAGACGCCACTGCCATTCTGGCCAATGTCCTACAGAAGTTTGGTGAGGACTTGTTTGGTCTTTATGGTGACAGCGCGGTGGTGGAGGTTGTCACAGTGAAGAACTTTGAGGTGCCACTTACCAGGAAATCTCGCTCAATCCTGGAGTCCAAACAAATTAGTAACCCTGGCAGTCCCTATAACCTGGCCTATAAGTATAACTTTGAGTATGCCGTGATCTTCAACATCGTGCTGTGGCTGATGATCATCCTTGCCCTGGCTGTTATCGTCATCTCATACAACCTGTGGAACATGGACCCAGGATATGACAGCATCATCTACAGGATGACCAATCAGAAGATCAGGTTGGACTAAGGTCTGCCCAGCAACACTCGAGCCCTCCTATTAGCCCTCTCCTAGTGAATCTTTGTTTTTCTTGTTTTATGTGAAAAATAAAGAAGTGGAGCTGAAGGTGTAGGCCTAATTCTAAATGGGTTGGATAGGTTTAAGCAATATGGTGAAAATAATGTATCTTAGCATAGTATAGGCCATGGTTGCACTAATTACAAACCAGATAGTGTATACCTATTCTACCTCTCAGCTATAGACAAGCTTCTAGTGGTTGGTTATGGACTTAGGAGTAGACATCAGAGTAGCAGTTGTTCAGGGAGAGGTAAAGGTCCTATCCAATATGAATGACATGTATAAGAGATGCACTTAATTAGTTAGCACCTTTGAGAAATTGCAGAGGTTAACTATACAGTAGCTGTAGTTGTGTAGTTTAATGCTGAGTTGTAACACTAGAGCTGTCTCTGAGGTCTAGTCCTGTACCTTCAACCCCACACTTCACATTGCTTATGAGTGTCCTCTTTTAGTAGGCGTCCTACATCCCTGGTGATTTCAAATgtcctgtttttatttttattgtaaaAAGTAAAGATTATTCTAATGCCCTGAAAGACTGAGAATTGACGTGTGTGATGTAAATGTTTGTCTCGCTATTTGAAACTGTTTTAAGTTAAAGTGAAATCTAGGTGTATATATTGAAGTTAGAAATGCAAATATCCTGAAGGAAACTGCTTTATTGGTATTGTGAGAAGGTCTGTAACATTCGCTGGCAGGTTGCAAAGGCGCCTTGCATGCATTTTGCGGTTGTGTGACTTTGACATTTGAATATGCAATAAATGAATTACCATCTAA

Function

NR:

description
renin receptor-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K19514 ATP6AP2, PRR; renin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579918.2 True 1996 mRNA 0.48 9 23354928 23363406

Neighbor

gene id symbol gene type direction distance location
LOC110502000 LOC106582153 coding downstream 3207 23333596 ~ 23351721 (-)
LOC110502001 LOC106582154 coding downstream 27796 23298314 ~ 23327132 (-)
LOC110502006 LOC106582004 coding downstream 119240 23197766 ~ 23235688 (-)
dcbld2 LOC106582006 coding downstream 275420 23056644 ~ 23079508 (-)
LOC118943636 LOC106582008 coding downstream 312056 23023970 ~ 23042872 (-)
LOC110501997 LOC106582152 coding upstream 5017 23368423 ~ 23460589 (-)
si:dkey-100n23.5 LOC106582150 coding upstream 113532 23476938 ~ 23578992 (-)
LOC110502029 g12 coding upstream 220041 23583447 ~ 23585473 (-)
LOC110502021 LOC106582149 coding upstream 244024 23607430 ~ 23618048 (-)
LOC110502018 LOC106582148 coding upstream 375200 23738606 ~ 23763120 (-)
G1790931 NA non-coding downstream 38693 23315885 ~ 23316235 (-)
G1790926 NA non-coding downstream 45634 23308853 ~ 23309294 (-)
G1790320 NA non-coding downstream 103212 23251493 ~ 23251716 (-)
G1790319 NA non-coding downstream 103852 23250788 ~ 23251076 (-)
G1790318 LOC106581475 non-coding downstream 104699 23249991 ~ 23250229 (-)
G1790951 NA non-coding upstream 29988 23393394 ~ 23394736 (-)
G1790982 NA non-coding upstream 101981 23465387 ~ 23465759 (-)
G1790983 NA non-coding upstream 102731 23466137 ~ 23466405 (-)
G1790989 NA non-coding upstream 106967 23470373 ~ 23470595 (-)
G1790990 NA non-coding upstream 107678 23471084 ~ 23471411 (-)
G1790280 NA other downstream 185565 23164481 ~ 23169363 (-)
G1789581 NA other downstream 935430 22418130 ~ 22419498 (-)
LOC110501594 LOC106581696 other downstream 1533983 21788428 ~ 21913721 (-)
G1787166 NA other downstream 2898945 20390516 ~ 20455983 (-)
G1786832 LOC100136012 other downstream 3008914 20345699 ~ 20346014 (-)
G1791405 NA other upstream 963323 24326729 ~ 24327127 (-)
G1792342 LOC106582127 other upstream 1485185 24848591 ~ 24849752 (-)
G1792345 NA other upstream 1493418 24856824 ~ 24857885 (-)
G1792433 NA other upstream 1622553 24985959 ~ 24986268 (-)

Expression


Co-expression Network