LOC110502031


Basic Information

Item Value
gene id LOC110502031
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23633163 ~ 23635182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002470285.2
AAAGGTAACAGTGGCTTGACCGTGGATGGTGCTGTCTCACTGGTCCAGCGGACAAGGCCGGATACGCTGGAAGGACTGGGGGAAATGGAAAGGCCACCACGACCAGACCAGGACCAGCTGACCGCCAACCACCCGGAGCAAACCAACAGAAAGAGAGCCCAGACCAGACACCTTCACCACCCGAACCAGAGGCATGGAGGAAGAACCAAAGATGCCAACCTTCACCTGGAGCAAGCAGACCACAGGGGAGTGCAACCATTAACCTCTGGGTCACGGGCTTCCAGGTGTGTCTGCTCACTCTGAGGTTTGTCCTTCCTCCTCCTGCAGGACCGGAGCAGACCCAAAAACTACCATCCCTCACCTGAACAAGATGACCGGGATGAACCCAGAAGCCATGCGCTGCTACAACGTGGTGTGACTGACGCTATTCTCCAACGAGGAGGGTGCCGAGGACGGAGCCGCCAATCGCCGGGGAGCAACAGGAGCAGCAACAACAACCGCCAAACCAGAAATTATGAGCCGTCTGGAATTCAGCACGGCAGACACAGAATCAAAAGTACGCTGGGGAACAACAGTCCAATTTCACAATGAAAAAATCTAAGAGCACAACATAGAAGTCTGGTTACCACGTTTTTCCACCCTCAAGTCAGTGGTTAGGAGGGTCCTGGATGAAGCCAAGGTCGGAACTAGGGGAACGGAAATGACTGGTTCACGCTGGGGAACAACAGGGGCTCCGTCCACTATTACGGCATGCCCAGACATCATCACTATTACAGCCTGCACAGCCATCATCTGCAAGATCTGTAAAGACAACCATCCCACCTCAGACTGTACCACCATACGCCCCTGTAACCTGTGCAGGAAAGGGTACTACTTCAGAACCTGCCTCAGTTTCTACTGGCCAATACCACCAACCCCACTAACCCAAATCCCAAAGCCACCAACGCCCCTCCACGAGACGACAAGAACAACGAAGACCCAGAACCAGGCCCAGACCTTAACACAGGCACCTCCCAACCCAACATCCAAGAAGTCCCAGAAACAGCCCCCACCCCTGTCGGACCCTCcaaatctgcccccccccccccccccaacaaataCTTTCCTAGCCACCTCCACCCTCTCCAATCCCCTGGTCAAAGGGGAGCAACTCCAGTTCTTAGACGACGACCCAAACTGGACAAAATTAcaaaaaggggaaaaaaaacagacaaacaaCAGACCCACAAGAGACCAGACCAGAAGACCACCCGAGAACCCAAACACCAACACCAGCAAGCATGACCCATATCCCCTCCGAGAAACCCGTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002470285.2 True 1312 mRNA 0.54 3 23633163 23635182

Neighbor

gene id symbol gene type direction distance location
LOC110502013 tfg coding upstream 442800 23164465 ~ 23190363 (+)
LOC110502028 LOC106586704 coding upstream 472151 23160350 ~ 23161012 (+)
LOC110502004 LOC106582005 coding upstream 485659 23123886 ~ 23147504 (+)
LOC110502117 NA coding upstream 577420 23053038 ~ 23055743 (+)
LOC110501603 NA coding upstream 582959 23044616 ~ 23050204 (+)
LOC110502002 LOC100195685 coding downstream 64438 23699620 ~ 23713577 (+)
LOC110502012 LOC106582145 coding downstream 156462 23791644 ~ 23799947 (+)
LOC110502020 LOC106582143 coding downstream 205716 23840898 ~ 23868839 (+)
LOC110502009 LOC106582142 coding downstream 246051 23881233 ~ 23901983 (+)
LOC110502003 LOC106582138 coding downstream 320981 23956163 ~ 24023376 (+)
G1790566 NA non-coding upstream 6064 23626743 ~ 23627099 (+)
G1790551 NA non-coding upstream 17960 23604635 ~ 23615203 (+)
G1790549 NA non-coding upstream 32344 23600528 ~ 23600819 (+)
G1790546 NA non-coding upstream 37540 23595382 ~ 23595623 (+)
G1790542 NA non-coding upstream 45498 23587444 ~ 23587665 (+)
G1790576 NA non-coding downstream 19833 23655015 ~ 23655248 (+)
G1790578 NA non-coding downstream 26690 23661872 ~ 23662074 (+)
G1790427 NA non-coding downstream 105380 23740562 ~ 23743194 (+)
G1790676 NA non-coding downstream 210483 23845665 ~ 23847029 (+)
G1790693 NA non-coding downstream 270236 23905418 ~ 23905728 (+)
G1790442 LOC106582152 other upstream 200780 23416093 ~ 23432383 (+)
G1788815 LOC100136012 other upstream 1633540 21998473 ~ 21999623 (+)
G1788811 LOC106581691 other upstream 1637070 21995364 ~ 21996093 (+)
G1787719 NA other upstream 2496686 21134265 ~ 21136477 (+)
G1786330 NA other upstream 3348592 20283181 ~ 20284571 (+)
G1790805 NA other downstream 483380 24118562 ~ 24119475 (+)
LOC110501605 LOC106582130 other downstream 758886 24394068 ~ 24423067 (+)
G1792040 NA other downstream 1207760 24842942 ~ 24843285 (+)
LOC110501609 fam155a other downstream 1213784 24848514 ~ 25013655 (+)
G1792649 NA other downstream 1659364 25294546 ~ 25296557 (+)

Expression


Co-expression Network