LOC110502024 (LOC106582147)


Basic Information

Item Value
gene id LOC110502024
gene name LOC106582147
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23776064 ~ 23788613 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959572.1
CAGTAAAGCAAACTTGTTTAAAATATTTGCTTCTACCAGATGTGCTGCATGAAATGGAATAGCATGTGTAAAACTTCTCCTGCCAAGATGAAGTGGTTGTCATGCTCTAGGCTGGTTTGACAAATGGTAACCTCTCGTGGAACTATGCTGCATGACCAAATTATGCGAGATTTTAGTTCTGGTTTAACCAAAATGATTAAAATGGCCATTATCTTTGGTTTATCTTTGATCCAGTGAATGATGCTTTGTTTACCTTGTTCTTCTAATCAGAGATTGGAAAGGTTTATCAGCACTGGTTTTTCAGATAGTGAAATAAAATAGTGGAATTGATTAACATTGAATTGGAGTGTTATTCAATGTTGTGTGAATAACCCTTTCTCCCACCATTAACATGTATTTTGATTCATTCTAGCAGAGAGATGGATGTGTGCTTGTGGATGTGTGCTTGTGGATGTGTGCTTGTGGATGTGTGCTTGTGGATGTGGGCTTGTGGATGTGGGCTTGATTGTGCATCAGCTGATTTCCTTTGATGAAAACAGAAGGGCTTGTCAATAATCCTCTTGAATAATAACACTACTAAAAGATGAACGTTATGAGTTTGAATGTAGATCACTAAATACTGTTCAAGTTAGTGTCCTAAATATATGAAACAGGAAGTGTGTTTTATGCGGCTATACTACTGACACAAGCACAGCGATATACACACTTCCTCCATTTTTGGTGGTCCAAGCCTGTTCAACGACCTCTCTTCGAATATCCAAAGCATTTCTTGCTTCCTGCGTCTCAGTATACCAGACAAAAACATCTCAAACGACAGTGTCTCCCTGCTTTACCGTTTTTCTCTAGCTAGTCCATCATAAATTAACAGGTACGGTTTCTAATGCCAATAGGACAAATAATTCCTAATATTAGTAGGGCCAGGATGATACCAGTATTGCGATACTCGTTAGtgtcgtggcaaggaaacaaatcACAAAGCTGATTTTAACTTCttcaggaaaacagccctaaggTTGGAAACTAACATCATTATggtgtcatccagagtcacataaAACATTTCCCCCAAGCTATAGcgcacaatattttacatacagcaggtttttaaaggaccaaagaggtTGGTCTGCTTTTGTTTTCATTTTTTGCCAAGGATAACATATTACTGGCATTGTCACAACCCTAATTTTTAGGGAAATGTCTGCCCTGAATCTAGgtcatcctctcctccatccctttcACTCGGTCACATTTTAAATATCTAGAGAGCCGGAGAGCTTGACTTGAGAGCTAGATTCACCCGGGGGTCCCATGAGTCGCTCTCTTACACTCCCTTATGTTTTTGGACAGCAATGCTTTTTTCTGTTTTTGTACATTTGTctctactccagcattttggatgtTGAGGgcattttcatacatatctgatCTCCCAAGCTATCTGACCTCACAAGCTTGATGTCATTGTGTGCAAGGAATActgaccaaatactaaacttttgactactttaatactgTGACATTTGTTACGTCTTCAAATGGGGGGGACTAGATCTATAAAGagctttcatttctaaacagtaAATCCGATGTGTataaaaataccctcaaataaaaggtgattctatactgtcacctcatatgaaacatttgatctcaaatccaacaTGCTGGAatatagagccaaattaaaaaTGTTAGCATCACTATCCACACACGTGTATGTAGTGGAGTGTAATTCAGAAACAAATATTTCTCTACACATAACATTGGATGAAAGGTGACATGGCCTCTGCATCTCCATTGAAATTGCTGGCCATGCCTTTTGCAAGAGATTCCATGCAGAAAGTTGCCTGCTTGAACAGACTGCAAATTACTCTGGCCAGCCTCTGTTAGATCTGACCCTACCCTAGAGTGTGTTTTTCACTATTCTCTCCAGGTTGTTGGCAATCCTTCTTAGTTTTTTTGACAGAGCTCAAACCATTTGGCTGGATTATTGATGTAGTCATGCGCCTGATGTCCCTCGTTGTAGGGatgtgacaacaacaacaaaaaatgtgaagATTCCATGTGAATTCAAAATGCAGCTTTGCTGCTGCTAGCAACTGTTTGGATCTCATGGTGTGTTCCTTTCAGATGGTTAAGCATGGCACCTGTACTACCTCGAGGGGTTACATTTGGACGGCACATTTTTGGTTGAATCCATTCAGTTGTGCAACCCCACTTGGTATCCCCAACTATTAACAATGATGGCGTAGTGGTGGAGAATTGACTCAAAAATAATTGATTCCTTGTTTCCTTGCACGTGAACGCCTATTTCTGAGTGTCAAGCAGAATCAACTCTTTTAAGATTCAGTATTTTTGGAACAGATGAGacttaaaaatttttttttatgCACTTTCAACAATGCAAACATTtgcattttggtcatttagcagacacactgATACAGAGTGACTTACTGGAGGGTTAAGTGGCCTGTACACGGGCACatcaacatttttttatttttacctaaTCTGCTCAGgaattcgaaccagtgacctttcagttactggcccaatgctcttcactgctaggtggagagagaggagaggggtaccgTATAGGCAGGTCGGACACCAGGCAGACaagtcagaaccgtgcactaggcttATCTATTGGCAATCAAATGCTGTATCTCGCAATTTCTTGGCTTGCAATGTCTCGCAACTTCGGTAAAGCAGGGCCTATCATCAATGAATAGTCTAGGGTAGTCTATATACAACAGACCGAAGACTAAACACACATATATGTCTTGGGAATCTCTTGCATGCCAAATTCACCAAAATCGACTCAAgtttgcctctttctctctggtttTATTTAAATTGCGCAACGTTCCCCATGTCTTTAGCCGATACAATGGAAAATGTTTTGTGATAACTACACTGCAATTTTTATTGGACATTTTTTTCCCTTAACATTAATGATCCCAATTTGGTTTAAACTTTCACACCCCTACGTCGTTCCCTCCTATTAATACATATTGTGACTGCGTTCAACtaaatatgactgagtcactgaACATAATTTCAGTCCTCTTTATCAACAGTAATCTCAAGCTTTTGCAATAGCTAGCACTTTTCCACCAGTTGGGCTACTCCCTGCAATGGGTTGTCTGAAGTGGTAGGATTTATCTGTGGCCCGTTCCCATCTCAAAGTCAGATGTATCTCTCTCACTGAACAGATTATTAGAACATAGCACATCTAAACTCTAGGCTTCCTCTAGGTTTCCCTACAGCTCGCCTTGCCTGCATGGGACAGAGAAAAGACACAAACTCCCCAGCGTGTCCACCGGTCAAGCACGGACTCCTGCTTTATTTTGCCCTTACCCCTCCTACAGTATCAAGGTTCCTCTACATCCAGGGATTTTGTCTGCCCACCCTCTATAGGTTCTAGGTCTCGGGATTTGGTCCGCCCCCCTCCTATAGGTTCTAGGTATCGGGATTTGGTCCGCCCCCCTCTTATAGGTTCTAGGTATCGGGATTTGGTCTGCCCCCCTCCTATAGGTTCTAGGTATCGGGATTTGGTCTGCCCCCCTCCTATAGGTTCTAGGTATCGGGATTTGGTCCGCCCCCCTCCTATAGGTTCTAGGTATCGGGATTTGGTCCGCCCCCCTCCTATAGGTTCTAGGTATCGGGATTTCTTATTTTATTGATTAAACCTTTTCACATTTTAGCAAGAGGGGCCAAACAGTCCTCTACCTTCAGCACCACCTGTGGGTTAAAAATAAAGTCTGTTTTAGTTAGCTATATAgcctattttttgggggggggtttagtttttgtatttttataaacCATTTTTTGATTTTTCCCTCTGCAGACCATCGTGATTCAAAACATCTACCGTAACCCCCAAAACAGTGCGCAGACGGCAGACGGCTCCCACTGTAAGTGCCTCCGGTCCAGTCCTCTCAGCCCACCAGGTCATTctagctctctccccctcctcagaTTTTAGGTCTGCGTCTCCACTGGCTTCCTGCAGGGCTTCGGAGGGTCTGTCTCAGCACTGGTAGCAGGGGGTACcacaacactacctcaacacttTAGTATATCGCCAATCtaatcaattttttttaaatatattttttaatcagtTGCCATTCAGAGGTCTATGCCTAGGTGTAGAATGACATGCTCTGATAGTGACATTGAAAAGGACTAAAACAAATGATGCCTTGATCCCCACAATTCACATTGGATCTTTAAAGTTATTATCCACAGGAAATCTCCACATAGTACCTGTTTTCTAACAGGTATAATGCACAGATGACAGACTTTAGGTATTTTTCAGGCGCTTTCAGAGAAGACTGACAATACACCTGCCCTAGTGCCCAACATGCGTTTGTGAATAGCTAGGTATCCATTCAATTGGCAACATTTTATGGGAATATTCGAAAATCTGCCTAAAATTATGTGCACATTTTCCCCCATGAGATATTTTTCtgttgcagataaaaggctgtgcgtgatgagtgaacataaaaaaaacagtttGCTGTTTAAttggtttccattgcattttcaactctactgatggttttctcacgAGAACGTGGGTTATCGCcagtgtgcccactctggtattggcacgtTCTCTCTAGCAGCGCTATCTGCTATCTGTTGGCTAGAGTGCGTGTATAGCCTACATGattacatttattattattatggacaaaagagcgagATTATTTTTGTCCGAGGGCAGCCGAGTATCGATAATCATGTCACCAGAacaagaccctcaatatttattggaaaggagcatcaagctcatcaccttgcacttttacccccctgtgaagttcatcgtaactttcatctgtagtctaataaactgcatgccgacgagtcatagtgggaggaacACATGtcatatatcaatatttgcgcttAAAAGCGTTTCCACCAACATTTCTCGCATTAATTTTACCAActcaaaaagatcccaccttgtctagcgtattttgttttgtcgacatttggaaagttgaatgaaaaatgtttccatcaggcctgtcatggcTTCTTTTCATCCGAAATGTTTCTACTCGCATTAAAAGGTTGGAGACAGCAAACACATCTACATGAGTTACTGTCTAGACACAGAACAGTTTGTGATTTTAGTTTTTGCTCTTGCAATACTGCCGCCCCTATATGTTAGACTGATTCAGACGTCATCAGCCATATTGTAAATGTGTAAATGGTACCCTGATGTTGAGCCCCGGCTAGCAGAGCTGATGCATTGCCACTCGCTTCCTCTAAGGTAAGTCGTGGGTTTGTGGTCTTGTTGCTGTCACGTGTAACTGTTCTGTTTCTCAGCTGAGAAACTCAGAATGACTGGCAAAAAgttacttttaaaaatgtattaaaaggaAGAAATGATAACTAGTAATAGAAACATCTTGGCATCCAATCGCCTATGATTCAGCAAGTTCTAGAGGTCACTTCAAGCCTCAATGACCTGGTATGTAATGTTTGGGTAGGCTAAATTTTcggttgtattggattttccaccatcattttccaTAGTCAAATATTGTCATGCTGAGACTTTCACTTCTTCCAGCTCCATCTCTTTCAGCGTGGACCAGTCCCATGGATCATCTTAACCTCTTTCAGTCTTCCCTTCCTACCCTGTTCTGGGCCTGGTTGGGGCACAAGTACACAGTTTtgagggagggggatgggagtAAATGCACCTATTTAACTACCATTTTAGAAATCTGCCTGAAACTATctcaaaaatgtacattttgtattTCAGACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACACTGCCCAGTCTGCCGATGGTTTGCGCTGTGCCGTCAGTGACGTGGAGATGCAGGAGCACTATGACGAGTTCTTTGAGGAGGTCTtcacagagatggaggagaagtatggagaggtggaggagatgaACGTGTGCGATAACCTGGGAGACCATCTGGTTGGAAACGTATATGTGAAGTTCCGTCGTGAAGAAGACGCGGAGAAGGCAGTGATGGATCTGAATAACCGCTGGTTCAACGGTCAGCCCATCCACGCCGAGCTCTCTCCCGTTACCGACTTCAGAGAAGCCTGCTGTCGCCAGTACGAGATGGGGGAGTGCACTCGAGGAGGCTTCTGTAACTTCATGCACCTGAAGCCCATCTCTAGGGAGCTGAGGAGGGAGCTATACGGACGCCGCAGGAAGAGGGGAGGGGGGCATCATTCTCGCTCCCGTTCCAGGGAACGTCGTTCGCGCTCAAGGGACAGGGgaaggggaggtggaggtggtggaggtggacgtGACCGCGAGAGAAGGCGCTCCAGAGACCGAGAACGCTCTGGAAGATTCTAAACCGAGCATCTACCAAACagccatccctcccttctccatTATCCCTCTTCATCCATCCCCAAATCCCTCTATCCTTGCCTCCATTGCAGCCTATCAATTCACCCTTGGCCTTTTCAATTCACCCTTGGCCCTTTCATATAATTGCGTCCCAATGACAAATTAATTGGAAGATGTtggacatgtttttttgtttgttttttttcttccaagaAATGGAAAGCTTTtcttttcaataaaaaaaaactatgaTTTGTACAAATTTATTCAAAATAGTTACTCTGGAAAACAAAAAGTAATGTTTTTATAGTGAACAGCTATGAGTAACTGTTACTTTTGCCTTGAGTCATCATACTCTAGACTGGGCTTACTGTAAGTGAGGGAATTTAAATACTTCCCATAGACTCCTCCCTGATTCCCAGTAACTTGACTCCCTCAGCTAATTTCTCACACAGAACATGCTCAGCTGTGAACTGAGTGTTCACTTGGCTCAAAAAGACAGTTGCCATAGATATGAAGCATCTCCTAAACCATAACCATATCATACCTCTTTTTTTCCAGTTTCCCATGCCGACATTTGCCTGTTTGGATTATGTCTACAAGTACATATTATTGACTGTGTTGACCTATAATTTTGGATAAATTGACTTGGCTAGAGAGGGAGGAGTCAAGGCCATAGTGTGGTTGAAGTAACACATTTAATACAGAATTCTTCTGGGTACTTACATTCAATatgagaatgacaagagtgtgcaaagctgtcaaggcaaagggtgtttactttgaagaatctaaaatatattttgatttgtttaatacttttttggttactacatgattccatatgtgttatttcaatgttttgatgtcttcactattatactacaatgtagaaaatagtaaaaataaaggaaaccccttgaatgag
>XM_036959573.1
GGTGAACTGTTCTTTCTACTTTAAAATTGGTGCCTGCCGCCATGGTGACCGATGCTCCAGATTACATAATAAGCCAACTTTCAGCCAGACCATCGTGATTCAAAACATCTACCGTAACCCCCAAAACAGTGCGCAGACGGCAGACGGCTCCCACTACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACACTGCCCAGTCTGCCGATGGTTTGCGCTGTGCCGTCAGTGACGTGGAGATGCAGGAGCACTATGACGAGTTCTTTGAGGAGGTCTtcacagagatggaggagaagtatggagaggtggaggagatgaACGTGTGCGATAACCTGGGAGACCATCTGGTTGGAAACGTATATGTGAAGTTCCGTCGTGAAGAAGACGCGGAGAAGGCAGTGATGGATCTGAATAACCGCTGGTTCAACGGTCAGCCCATCCACGCCGAGCTCTCTCCCGTTACCGACTTCAGAGAAGCCTGCTGTCGCCAGTACGAGATGGGGGAGTGCACTCGAGGAGGCTTCTGTAACTTCATGCACCTGAAGCCCATCTCTAGGGAGCTGAGGAGGGAGCTATACGGACGCCGCAGGAAGAGGGGAGGGGGGCATCATTCTCGCTCCCGTTCCAGGGAACGTCGTTCGCGCTCAAGGGACAGGGgaaggggaggtggaggtggtggaggtggacgtGACCGCGAGAGAAGGCGCTCCAGAGACCGAGAACGCTCTGGAAGATTCTAAACCGAGCATCTACCAAACagccatccctcccttctccatTATCCCTCTTCATCCATCCCCAAATCCCTCTATCCTTGCCTCCATTGCAGCCTATCAATTCACCCTTGGCCTTTTCAATTCACCCTTGGCCCTTTCATATAATTGCGTCCCAATGACAAATTAATTGGAAGATGTtggacatgtttttttgtttgttttttttcttccaagaAATGGAAAGCTTTtcttttcaataaaaaaaaactatgaTTTGTACAAATTTATTCAAAATAGTTACTCTGGAAAACAAAAAGTAATGTTTTTATAGTGAACAGCTATGAGTAACTGTTACTTTTGCCTTGAGTCATCATACTCTAGACTGGGCTTACTGTAAGTGAGGGAATTTAAATACTTCCCATAGACTCCTCCCTGATTCCCAGTAACTTGACTCCCTCAGCTAATTTCTCACACAGAACATGCTCAGCTGTGAACTGAGTGTTCACTTGGCTCAAAAAGACAGTTGCCATAGATATGAAGCATCTCCTAAACCATAACCATATCATACCTCTTTTTTTCCAGTTTCCCATGCCGACATTTGCCTGTTTGGATTATGTCTACAAGTACATATTATTGACTGTGTTGACCTATAATTTTGGATAAATTGACTTGGCTAGAGAGGGAGGAGTCAAGGCCATAGTGTGGTTGAAGTAACACATTTAATACAGAATTCTTCTGGGTACTTACATTCAATatgagaatgacaagagtgtgcaaagctgtcaaggcaaagggtgtttactttgaagaatctaaaatatattttgatttgtttaatacttttttggttactacatgattccatatgtgttatttcaatgttttgatgtcttcactattatactacaatgtagaaaatagtaaaaataaaggaaaccccttgaatgag
>XM_036959570.1
GATGCTTCAGCTTTATAGCCCATTTGACGTGTCTGGGTTACCCTTTCTGTCGGTGGTCCACATTTTACACTCTTTGGTTTAGTCGACATAATCGAAAATGGCGGAATACCTGGCGTCCATTTTCGGTACAGAGAAAGATAAGGTGAACTGTTCTTTCTACTTTAAAATTGGTGCCTGCCGCCATGGTGACCGATGCTCCAGATTACATAATAAGCCAACTTTCAGCCAGACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACACTGCCCAGTCTGCCGATGGTTTGCGCTGTGCCGTCAGTGACGTGGAGATGCAGGAGCACTATGACGAGTTCTTTGAGGAGGTCTtcacagagatggaggagaagtatggagaggtggaggagatgaACGTGTGCGATAACCTGGGAGACCATCTGGTTGGAAACGTATATGTGAAGTTCCGTCGTGAAGAAGACGCGGAGAAGGCAGTGATGGATCTGAATAACCGCTGGTTCAACGGTCAGCCCATCCACGCCGAGCTCTCTCCCGTTACCGACTTCAGAGAAGCCTGCTGTCGCCAGTACGAGATGGGGGAGTGCACTCGAGGAGGCTTCTGTAACTTCATGCACCTGAAGCCCATCTCTAGGGAGCTGAGGAGGGAGCTATACGGACGCCGCAGGAAGAGGGGAGGGGGGCATCATTCTCGCTCCCGTTCCAGGGAACGTCGTTCGCGCTCAAGGGACAGGGgaaggggaggtggaggtggtggaggtggacgtGACCGCGAGAGAAGGCGCTCCAGAGACCGAGAACGCTCTGGAAGATTCTAAACCGAGCATCTACCAAACagccatccctcccttctccatTATCCCTCTTCATCCATCCCCAAATCCCTCTATCCTTGCCTCCATTGCAGCCTATCAATTCACCCTTGGCCTTTTCAATTCACCCTTGGCCCTTTCATATAATTGCGTCCCAATGACAAATTAATTGGAAGATGTtggacatgtttttttgtttgttttttttcttccaagaAATGGAAAGCTTTtcttttcaataaaaaaaaactatgaTTTGTACAAATTTATTCAAAATAGTTACTCTGGAAAACAAAAAGTAATGTTTTTATAGTGAACAGCTATGAGTAACTGTTACTTTTGCCTTGAGTCATCATACTCTAGACTGGGCTTACTGTAAGTGAGGGAATTTAAATACTTCCCATAGACTCCTCCCTGATTCCCAGTAACTTGACTCCCTCAGCTAATTTCTCACACAGAACATGCTCAGCTGTGAACTGAGTGTTCACTTGGCTCAAAAAGACAGTTGCCATAGATATGAAGCATCTCCTAAACCATAACCATATCATACCTCTTTTTTTCCAGTTTCCCATGCCGACATTTGCCTGTTTGGATTATGTCTACAAGTACATATTATTGACTGTGTTGACCTATAATTTTGGATAAATTGACTTGGCTAGAGAGGGAGGAGTCAAGGCCATAGTGTGGTTGAAGTAACACATTTAATACAGAATTCTTCTGGGTACTTACATTCAATatgagaatgacaagagtgtgcaaagctgtcaaggcaaagggtgtttactttgaagaatctaaaatatattttgatttgtttaatacttttttggttactacatgattccatatgtgttatttcaatgttttgatgtcttcactattatactacaatgtagaaaatagtaaaaataaaggaaaccccttgaatgag
>XM_036959571.1
GGATGCTTCAGCTTTATAGCCCATTTGACGTGTCTGGGTTACCCTTTCTGTCGGTGGTCCACATTTTACACTCTTTGGTTTAGTCGACATAATCGAAAATGGCGGAATACCTGGCGTCCATTTTCGGTACAGAGAAAGATAAGGTGAACTGTTCTTTCTACTTTAAAATTGGTGCCTGCCGCCATGGTGACCGATGCTCCAGATTACATAATAAGCCAACTTTCAGCCAGACCATCGTGATTCAAAACATCTACCGTAACCCCCAAAACAGTGCGCAGACGGCAGACGGCTCCCACTGTGCCGTCAGTGACGTGGAGATGCAGGAGCACTATGACGAGTTCTTTGAGGAGGTCTtcacagagatggaggagaagtatggagaggtggaggagatgaACGTGTGCGATAACCTGGGAGACCATCTGGTTGGAAACGTATATGTGAAGTTCCGTCGTGAAGAAGACGCGGAGAAGGCAGTGATGGATCTGAATAACCGCTGGTTCAACGGTCAGCCCATCCACGCCGAGCTCTCTCCCGTTACCGACTTCAGAGAAGCCTGCTGTCGCCAGTACGAGATGGGGGAGTGCACTCGAGGAGGCTTCTGTAACTTCATGCACCTGAAGCCCATCTCTAGGGAGCTGAGGAGGGAGCTATACGGACGCCGCAGGAAGAGGGGAGGGGGGCATCATTCTCGCTCCCGTTCCAGGGAACGTCGTTCGCGCTCAAGGGACAGGGgaaggggaggtggaggtggtggaggtggacgtGACCGCGAGAGAAGGCGCTCCAGAGACCGAGAACGCTCTGGAAGATTCTAAACCGAGCATCTACCAAACagccatccctcccttctccatTATCCCTCTTCATCCATCCCCAAATCCCTCTATCCTTGCCTCCATTGCAGCCTATCAATTCACCCTTGGCCTTTTCAATTCACCCTTGGCCCTTTCATATAATTGCGTCCCAATGACAAATTAATTGGAAGATGTtggacatgtttttttgtttgttttttttcttccaagaAATGGAAAGCTTTtcttttcaataaaaaaaaactatgaTTTGTACAAATTTATTCAAAATAGTTACTCTGGAAAACAAAAAGTAATGTTTTTATAGTGAACAGCTATGAGTAACTGTTACTTTTGCCTTGAGTCATCATACTCTAGACTGGGCTTACTGTAAGTGAGGGAATTTAAATACTTCCCATAGACTCCTCCCTGATTCCCAGTAACTTGACTCCCTCAGCTAATTTCTCACACAGAACATGCTCAGCTGTGAACTGAGTGTTCACTTGGCTCAAAAAGACAGTTGCCATAGATATGAAGCATCTCCTAAACCATAACCATATCATACCTCTTTTTTTCCAGTTTCCCATGCCGACATTTGCCTGTTTGGATTATGTCTACAAGTACATATTATTGACTGTGTTGACCTATAATTTTGGATAAATTGACTTGGCTAGAGAGGGAGGAGTCAAGGCCATAGTGTGGTTGAAGTAACACATTTAATACAGAATTCTTCTGGGTACTTACATTCAATatgagaatgacaagagtgtgcaaagctgtcaaggcaaagggtgtttactttgaagaatctaaaatatattttgatttgtttaatacttttttggttactacatgattccatatgtgttatttcaatgttttgatgtcttcactattatactacaatgtagaaaatagtaaaaataaaggaaaccccttgaatgag

Function

NR:

description
splicing factor U2AF 35 kDa subunit isoform X2

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG:

id description
K12836 U2AF1; splicing factor U2AF 35 kDa subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959572.1 False 7328 mRNA 0.42 6 23776064 23785592
XM_036959573.1 False 1668 mRNA 0.44 8 23776064 23785691
XM_036959570.1 False 1742 mRNA 0.44 8 23776064 23788612
XM_036959571.1 True 1743 mRNA 0.44 8 23776064 23788613

Neighbor

gene id symbol gene type direction distance location
LOC110502018 LOC106582148 coding downstream 12944 23738606 ~ 23763120 (-)
LOC110502021 LOC106582149 coding downstream 158016 23607430 ~ 23618048 (-)
LOC110502029 g12 coding downstream 190591 23583447 ~ 23585473 (-)
si:dkey-100n23.5 LOC106582150 coding downstream 197072 23476938 ~ 23578992 (-)
LOC110501997 LOC106582152 coding downstream 315475 23368423 ~ 23460589 (-)
appb LOC106582144 coding upstream 14964 23803577 ~ 23835647 (-)
LOC110502014 LOC106582141 coding upstream 145247 23933860 ~ 23938722 (-)
LOC110502070 NA coding upstream 163962 23951016 ~ 24038256 (-)
LOC110502010 LOC106582139 coding upstream 233774 24022387 ~ 24050582 (-)
LOC110502071 LOC106582043 coding upstream 264649 24053262 ~ 24072305 (-)
G1791104 NA non-coding downstream 97604 23678164 ~ 23678460 (-)
G1791084 NA non-coding downstream 119565 23656271 ~ 23656499 (-)
G1791083 NA non-coding downstream 120609 23655255 ~ 23655455 (-)
G1791081 NA non-coding downstream 122610 23652722 ~ 23653454 (-)
G1791068 NA non-coding downstream 148836 23626710 ~ 23627228 (-)
G1791091 NA non-coding upstream 11377 23799990 ~ 23802042 (-)
G1791155 NA non-coding upstream 33766 23822379 ~ 23840568 (-)
G1791168 NA non-coding upstream 48119 23836732 ~ 23904072 (-)
G1791153 LOC106582143 non-coding upstream 52279 23840892 ~ 23868836 (-)
G1790280 NA other downstream 606701 23164481 ~ 23169363 (-)
G1789581 NA other downstream 1356566 22418130 ~ 22419498 (-)
LOC110501594 LOC106581696 other downstream 1955119 21788428 ~ 21913721 (-)
G1787166 NA other downstream 3320081 20390516 ~ 20455983 (-)
G1791405 NA other upstream 538116 24326729 ~ 24327127 (-)
G1792342 LOC106582127 other upstream 1059978 24848591 ~ 24849752 (-)
G1792345 NA other upstream 1068211 24856824 ~ 24857885 (-)
G1792433 NA other upstream 1197346 24985959 ~ 24986268 (-)
LOC110501627 LOC106582113 other upstream 1921960 25709599 ~ 25744218 (-)

Expression


Co-expression Network