LOC110501608 (LOC106582128)


Basic Information

Item Value
gene id LOC110501608
gene name LOC106582128
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 24779405 ~ 24785002 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579292.2
TTGTTTGCCACGTTCTACACGGAATTTATCGAAGTGACACGAGTGAAGAAACACTATACAGGAAGTAGCTAGCTACATAACTGCATTAGGTTGCCTGCCGGGTTGTTTATTTATAGTCGCTCATATCTGAATATACATTTTGTGTGAGCTTCTGGACCGAATGACATTGACTGCGTTTATTATGCAATTTGTTTACCTCGCTGCATGCAGTTGAATCGAAAAATTATGAGAGAGAGggtgtgtgtggtggtgtgatcCTGTGTGTCTTCTCTGTGCCATGGAGAAGCCGTGGAGGCTGTGGGGCTCGGTGGAGCGCTGTGCCCTGGCCTTGGCCTCCTGGTCCTGGGGTGCCTGTCGCGTCTCCCTCCTGGCCCTTATCCTCACCTTCCACCTCTTTGGAGGCTTCTTCCTCCTGGCTCTCATCCTGGCCTCGGTGGCTGGCATCCTTTACAAGTTCCAGGATGTGCTGCTCTACTTCCCCGACCAGCCCTCCTCCTCCCGTCTGTACGTGCCCATGCCCACAGGCATCCCCCATGAGAACGTCTACATCCACACCAAGGACGGCGTGCGCCTCAATCTTATCTTGCTCCGCTACACTGGTGGAGACAGCCTGGGCAACCCTGGGGTCGCCCCCGGCAATGCATCTAACCCCTGCTCCACGGCCCCACCCACCATTCTCTATTTCCACGGCAATGCGGGCAACATCGGGCACCGGGTGCCCAACGCGCTCCTGATGCTGGTGAACCTGAAGGCCAACGTGGTGCTGGTGGACTACCGGGGGTATGGGAAGAGCGAAGGTGAGCCCAGTGAGGATGGCCTGTACCTGGACGCCCAGGCCACGCTGGACTACGTGATGACCCGGCCCGACCTAGACAAGACCAAAGTGATGCTGTTCGGCCGCTCTCTCGGGGGGGCGGTGGCAGTACGCCTGGCCTCGGCCAACCCTCACCGCGTGGCGGCCATCGTGGTGGAGAACACCTTCCTCAGCATCCCCCACATGGCCGCCACACTCTTCTCCTTCTTGCCCATGAGGCTGCTGCCCTTGTTGTGCTACCGGAACCAGTTCTTGTCCTACAGACAGGTGGCGCTGTGCCGGATGCCCTCGCTGTTCGTGTCAGGCCTGTCAGACCAGCTCATCCCACCTGTCATGATGAAGCAGCTGTACGAGCTGTCGCCGGCGCGGACTAAACGGCTGGCCATCTTCCCAGAGGGCACGCACAACGACACGTGGCAGTGCCAGGGCTACTTCGCCGCTCTCGAGCAGTTTGTCAAGGACCTGATGAAGAGCCACGCCCACGAGGAGAGAGTCCAGTCCACTGCCAGCGTCACCATCATCTAGTCtagtggggagggaggaagactgTCTGGTCTAGAGAAAACCCTGCATTCCATACTCCCTATACAGTTGTGTAGATTGGAAATGATTGAATAAGTCTAATAAGCAAAATGGAAAAGCTAGGGCAAGGTGCAGCCAACCACTACCATATTGCTTATACCTGTCCAGTTCTTTATGATCTACTTTAAGTACTTATTGTGGGTTATGGGTTGTTCCTGGACCAGGTCATGGAGTTAGTGTGATGGTAGGATACAGGAGAGTGGGTATTGACTCCTCCATTTGAATGAACAGAAGTAAACTGGGCTCAACTACTAGGGTCAGGTTAGAGAGAATGTAGATTTCTATGTTTTTTGGGAGGTTTGGTTTTTATTATCTTATTCTGTTGGTGTAATTGTACCAGATCAAACAATTGGGGAGTATATATGGAGGGGGACAGTGTTTGATGTGGGGGGATGATTAACATGGAAATGCTTTTGTGTTTGAACTATGAATGCATGGGTGAATATGTACTTTTTATGGCCTTTGAATggcttacacacacaccatacacacaaccATGTTCATACTGTcagacacaacacaaccacaggTTTTTACAAAGAACATAACAGAATTTCAGTAAATCAATAAAAATGTTTGATTAGCATAATAGCATTTCAGTAACTCAATAAGAAATGTTTGACAAATATGATAGCTTTTCACAAATTCAATAAAAGTCTTGCCTGTTGTAATGACGTAAGACCCAAGATCTTGgcatttaacattttttttacataatcTATGCTATTTCAGGACACGCTGTTTAAAGTTAAATGTGTGAGGATCTTAAAGGCTTCATAATATAAAATCATGTTCATATCAGTCGGTAGATTACCATGTGGGCTGTACCATATTGGTTCTCTGTAGACTGTGGCACGTTGAAAAGCTGCATGCACAAACTGCAAGTTTCACTATCAAACTGATTTTGTTATAAATCCCTTGATTATATTCCTTTTCTGCAAAGGTCCCGTTCTTATGTTCTCTGACAATAAATATAAACTCAGATGTGGCCGGAACTGTTTGTCAACTCTTTGCATAGTTTACCCATGACCCTTTATCTTGGTCGGCCACACCAGGGCTTTCAGTTGGATGTGAACTTCAGATCATGACGtgagctgtgtctgtctgtaaaaTACTCATCTATCTGCAATGTTCTGCACACTATTAAAAATCTAAGTGCACTCTCCCAAATAGCATGGCCTGAAAAAACACCTGGCTCTACTTTATACTTCCTGTGAGCCAGGTACACACAGGCTCTGgttagatagtgtgtgtgtgttgggtgtgtaaTGATTGAATTCTGATCCCTGTGTTATTGCCTTGAGACTCGAGTGGGACTAAgttgtattattatttgtgtTAATCTATTCTTCTCAACATAATTGTTCCTTCAAGTAGGCTCGTGTCTCATCTCACCCTATAGCTCTTGTGGAGAAATGGCTTTATCCTCTTGGAGTGCTTTTTACAAGCTAATTAACCTTTCCTGCATGTCTCCCAGGGACTGAAGGTGAGctagaccagtgtttcccaactgtggtccttgagtacccccaacagtacacatttgtgTTGTAGCCTTGGAAAACACTGCTCATTGAGGGCTTGTTGACAAGTTGATCCAGGTGTGCTTGTGAGCTAGACAATAATAAACTCTTACTGTgctgggtcctgttcattaggcaccaaacaaaaGGAAACGTAATGAAACATGTCCAAAAAAAAACGCTAATGTTTAGTTGTCCGTtgtaaaatgttttgctacggtgtgctctaatgaatatgaccctgctCTCAGTCTCAGTGCAGCATGCTGCAGTGCAGTTTTACAGTATTGAAGCCATTCTGACACAACAAACAGAGACACTCAGCATCAGCAGACATGTTGGCTCTAGAGTCTAACTTCAGACTAAACTCTCCATCACAGTGAGATGAAACAGTCTCAGTGTTGGTGACGTTTCTGGTTTTAACTGTTTTAACTTTTATATAGGGCACTTATTTTACAATATATAGGCAATTACCTACTGAATGTGTAGTCAGTGTGGATGTGAGTTGACCAGTGTGCTTTACATGAAGAGAAACTCTGTACAGTGTGAGATCCCCAGCATTATATAGCGTTATGTGGGATGTTTTGTAACCCAACAAGGGGTGCATGCTTTGTCTGCAGTGGTTGgcttgtgtgtgtatgatggACAAACACTTTACTGAGTCTGTGttgatgcatttgtgtttataGACCTTGTAGTACCAGTCTACCGTCTCTGAGAGTAGACTGCCAAAATATTTCAATGGCAGGAACTGACTGGCTTGCTGCCATATCAAAATGTGTGTGAGTGGAGCGTGTTGCTGTGCTGTCACAATCAGACCCTGTCAGTTACACACACCTGTAGACAATGACCTGGCAATGTGCCATAAACAGTGGGAGTCAATACCCATTTCATTTAAATTACTGTAAGATAACTTGGACATGGTTAGACATCCTAAGAGTGCAATGCaatttctgaattgactggaattggcCCAGACTCCCACCAAAGTTGTTGATCGAGTTGATAGGTGTGGGACTTTTTTTCAAAAACGTTGCTGATAGAATCTTTGGCCCTGCCTGATTACCAACCACCGACGAGGTCCCATtgtgaaatcatttcaaatcgAACTGAATGTTTTGTCTCAAAGCAATTGCTATTCTACATGTTTGCACTGGCATTGTGTAAAATAGCCTTTGTACAGTTATCTGATTGTTAATGCTTCTCAGAATGGTGTGGAAGCTGACAATATGCAGGAGAGAAGGATGCATGGGTATTATTGATGTACTGAAGTGTTCATATGTTGACATACTGATATGTTGAAGCACTAAAtgcatgatgatggtgatgaatgTTCACTCTTCTCTGAACCGGAGGCTTATGGGTATTGTAGTTGAGCGCTCTGTACCTTTTCATTAACTGAATTTGTAATGTTCATCCATTCAGTTTAGGAAAACAACCATTGCACTCATTTCCCTACTCtagtgttgatgttttttttatattCATTATTCTTTTCTATGTACACACTCACTTTCTAttctctgtacagtaacatgcaatAACTGAATAAACCCAATATTCTGCTAAA

Function

NR:

description
protein ABHD13

GO: NA

KEGG:

id description
K24083 ABHD13; abhydrolase domain-containing protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579292.2 True 4489 mRNA 0.45 2 24779405 24785002

Neighbor

gene id symbol gene type direction distance location
tnfsf13b tnfsf13b coding downstream 470 24774718 ~ 24778935 (-)
LOC110502073 myo16 coding downstream 23555 24519574 ~ 24755850 (-)
LOC110501998 LOC106582131 coding downstream 515118 24157993 ~ 24264287 (-)
naxd LOC106582132 coding downstream 631419 24141838 ~ 24147986 (-)
LOC110502019 LOC106582134 coding downstream 637808 24138664 ~ 24141597 (-)
LOC110501610 LOC106582126 coding upstream 314439 25099441 ~ 25149856 (-)
LOC110501612 LOC107389858 coding upstream 378187 25163189 ~ 25176805 (-)
LOC118943630 NA coding upstream 446259 25231261 ~ 25234195 (-)
LOC110501615 LOC106582053 coding upstream 488866 25273868 ~ 25278632 (-)
LOC110501616 LOC106582122 coding upstream 516817 25299369 ~ 25311767 (-)
G1791855 NA non-coding downstream 217882 24561323 ~ 24561523 (-)
G1791788 NA non-coding downstream 329888 24449195 ~ 24449517 (-)
G1791474 NA non-coding downstream 409314 24369637 ~ 24370091 (-)
G1791242 LOC106586666 non-coding downstream 454672 24319442 ~ 24324733 (-)
G1792026 NA non-coding upstream 47262 24832264 ~ 24832586 (-)
G1792037 NA non-coding upstream 54221 24839223 ~ 24839788 (-)
G1792041 LOC107663003 non-coding upstream 58045 24843047 ~ 24843264 (-)
G1792347 NA non-coding upstream 76095 24861097 ~ 24861333 (-)
G1792354 NA non-coding upstream 90779 24875781 ~ 24876036 (-)
G1791405 NA other downstream 452278 24326729 ~ 24327127 (-)
LOC110501997 LOC106582152 other downstream 1319045 23368423 ~ 23460589 (-)
G1790280 NA other downstream 1610042 23164481 ~ 23169363 (-)
G1789581 NA other downstream 2359907 22418130 ~ 22419498 (-)
LOC110501594 LOC106581696 other downstream 2958460 21788428 ~ 21913721 (-)
G1792342 LOC106582127 other upstream 63589 24848591 ~ 24849752 (-)
G1792345 NA other upstream 71822 24856824 ~ 24857885 (-)
G1792433 NA other upstream 200957 24985959 ~ 24986268 (-)
LOC110501627 LOC106582113 other upstream 925571 25709599 ~ 25744218 (-)
G1794978 NA other upstream 2483660 27268662 ~ 27286095 (-)

Expression


Co-expression Network